Cpec004650.2
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- -
- Assembly
- GCA_951394395.1
- Location
- OX596352.1:9970896-9980214[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0049 0.28 12.1 1.5 3 23 577 598 576 598 0.96 2 24 5.1 2.9e+02 2.6 1.1 4 23 962 983 960 983 0.84 3 24 0.08 4.6 8.3 0.6 1 21 988 1008 988 1009 0.96 4 24 8.6 4.9e+02 1.9 0.4 1 23 1049 1072 1049 1072 0.90 5 24 0.0012 0.07 14.0 0.7 3 21 1083 1101 1083 1102 0.96 6 24 0.14 8.3 7.5 0.2 3 23 1111 1132 1109 1132 0.94 7 24 0.45 26 5.9 0.8 3 23 1151 1172 1149 1172 0.92 8 24 0.0021 0.12 13.3 2.1 1 23 1177 1200 1177 1200 0.93 9 24 0.15 8.8 7.4 0.0 1 23 1226 1249 1226 1249 0.90 10 24 0.023 1.3 10.0 3.4 1 23 1254 1276 1254 1276 0.97 11 24 0.011 0.62 11.0 0.2 1 23 1282 1305 1282 1305 0.95 12 24 0.0096 0.55 11.2 0.8 1 23 1318 1340 1318 1340 0.97 13 24 0.00022 0.012 16.4 1.8 1 23 1392 1415 1392 1415 0.97 14 24 0.0031 0.18 12.8 1.4 1 23 1475 1498 1475 1498 0.96 15 24 0.0014 0.078 13.9 2.1 2 23 1523 1545 1522 1545 0.95 16 24 0.024 1.4 9.9 0.1 2 23 1551 1573 1550 1573 0.94 17 24 0.008 0.46 11.4 0.3 1 21 1617 1637 1617 1638 0.95 18 24 0.0015 0.087 13.7 0.6 1 23 1648 1670 1648 1670 0.93 19 24 0.00022 0.013 16.3 0.3 2 23 1764 1786 1764 1786 0.93 20 24 4.1e-07 2.3e-05 25.0 1.4 3 23 1793 1813 1792 1813 0.98 21 24 0.0065 0.37 11.7 0.4 1 23 1833 1855 1833 1856 0.95 22 24 0.42 24 6.0 0.0 1 23 1877 1899 1877 1899 0.97 23 24 0.036 2.1 9.4 0.6 1 23 1905 1928 1905 1928 0.95 24 24 0.00045 0.026 15.4 0.4 1 23 1936 1959 1936 1959 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCACCCATCCTCGCTTTGAAAATAAAGGATTGTGTGTCTGTAGAGATAAACGAAGATGACGAGCTGCCGACGAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACAGTATGTGCAAAGGCACAAAACAAACTACTGTCTTTCACAAGGAAGGATGGAAGCCTACTAGAAGAGGTGCACATCAAAAGTGAACCCTTCTCTGATGAGGCTTATGATGATGGAGTTGTTATTGATGGCTCTTACCCTGGAGCTGAGAATGCCAGCTTTTCAAGTAAAATACAACCCGAAGGTCCTCCGATTCTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCATCGAGTCCATGCAATATTAAATATGGTTCAAGAGAGCAATGTCATTGATGCACTGCAAGCTGTTGAAGAGAGTGATGTTTTGCATCACTCCGACCATGAGTCCGAGACAGAGGCTGAACTCCAACCAGATCTAGATGATAATTTTGTTGATTATAAAAATGGCTATGcttgtagaaataaaaatattttgttcagCAAACCACAAAAAGTCAGCTCTGGACCCAAAGGTGCTATAAAACCGAAAAAACGAACAATTTCTTCTCATAAGCAATATGGTAGCCCCAAAATTGCTTGGCAGCTACTGTTCACAGATGATATACTTGAACTCATTGTCTCATCAACTAACAAGAATATACTCAGACTTGGCATTGAAGGGTGCACCAATGTTGCTGAAATCAAAAGTTTTATTGGAATTTTGTACTTAAACGGCATAATGAGGCCAACTCATGAGAAATGCAGTGACCTCTGGGACATGAAATGCGGCGTCCCGTCTGTTATAAACGCGATGACAAACGAACGCTTCAACATTCTTTTAAAAAACATCTGCTTCTATAGCCAAGAGGATGTCGGTAGCATAATACAGTTTGACACAATGAAACGCATACGCAAGGTGTTTGAAATATTCGCGTTGAACTGCAGAACAGCCTTCGATATTCAGAGTAACGCAGTCATTGATGAGATCATTGTGCCAGTCTATGGACCTTGCCCGTTTCGATACGATATCGAAAAGAAACCATTGAAACGTGGAATGAAACTGGTGTTGCTAGTCGATCCGAATAATTTCTATGTAAGCAATTTGGACGTGATCACAGATCCGTATTTTGGAGCTAAGgagattgttaaaaaaataactcagCACCTGTTTGGTACTGGGAAAACGATCATTATGGATAGCTGGTACTTTTCTCCTCAACTGCTGCTTACGCTGAAGAGTTATCAGCTTTATACAATAGCGGCGGTGCACCCAAACAGCGATGAAATACCCCCATTATTTCTATCAGAGTTCAGAAAAAACTGCACATACGTGTCCGGATTTCTCGACGGTGAAATCTCGTTGACGTCTCACCTAAACGCGCAGTCGAAAGGACTGGAAAGCGAGAAGGATGAAGAAGAGGAATACGAAGACGAGATGAAAGCTCCTCAGCCAATGAAAGTCCCACACATGCCCGAGGTTTCCATCACCGTGATGCGGCCGACTGGAGAGACGCTTCACGCACGCCAAGGTATCCAACAGATCGCGTCCAAAGACTGCCTTATCTGCGGACGATCCTACAGATACTCGCACAACGCGAGGCGACACGAACTAACATCACACAAATTCGACCgctacacaaacaaaataaacaacaaaaaatcacaaaaacctAAACTTAGGCCCAACCCTTTCAACCCGAAAGCGCGACTCATGCCCAATCCTATCAGCCATAAAATGCAATTACTGCCCAAACTCATGCCAAAAATGATGCCACAAAGAATGATTACCCCACCTAAACCGATACCTATCAAATCTTCTAAGACACCGCACAATAATTTGCCGTATCCGTTGCGCATCAAAGCTCTCAAagatttgcaaataaaaaaaaaggaaccacagattttaaaaacattactcACATCAAAACCGGAAGTCCTTGTGTCGGAACCAGAAATCATGAACTCCGGTCCCGAAAGTCCTGAAACGTTGATATCTGAGCCTGAAATAGCGTCTTTCCAAGTTGAGGCTATACTATCGGAACCTAACGACTACGATGAAAACCAAGAAGAGGAAGGGGACGCAGAAATGCATAACAACCAGAGTCAAAACTACGATACAGTCGATATGGACtctgaaaatgaaatagaaattgCGCGTCAACAAGAAAATGTTGATGAAAATGAAGAAAATCACGATGAAGATGATAATATTCAGAACGATGATGAAAATGACGACGCAAATGTTGGTGAAGAAGGCGAGAAAGAGAAAGAAACCGAAAATGAAAAAGATCTCAGTCCTCAAGCAAGTCTCGATGAGGAAGGCAACGAGAATATGGATGTTGACGTAAACTACGAAGCCAAAGACGATGAACGTAATAACGAAGAGGAAGAAGAAGGAAATGAGGAAGGTGAGAATGAACACGATGCCAGTCAGGCTGAAGAAAACGAGGACGATGAAGATCCGCCGGTTGGAATAGCGCCGGAAGTAGAACTAAACGAGGGCACGCACAACTCTAACACTTTCAATAGCGAGATAAACGACGACGAAGAAGAACCAGATGAAAGCGCCGAACACAATGCTACTGCTGATGGTGAACCCGACGGTGAACCCGATGCACTCGACGCTGACAAAACATTAGTCACCAGTGCACAAAGAGACTTCATCAAAAGGTTCCGCGATATAATCCTACAGATCAACACAAAGAGATGCCTGTGTTGCGATAAGGAGTACCCTCGCAGAAAAGCTGTTATTCAACATTTACAGAAAAATGGACACAAAGTTCCTAAACACACTTGTTACAATTGTGTCGTTACTTTCACTCACATTGGAGCTCTACTCAGCCACATGAGGCAAAACTCTTGCACTGATCTTTGGAAAATTATCTACGACGAGAACGGTATCACGAGCGATATGATTGTTGAAGAACCCAAAAGCAAGATTCAAGCTAAAGATATTTTCAATGCTAAATCTTATGCATGCAGATTGTGTCCTGCTAAATTTCAGCTAAAGCAATCTATTATGAAGCATGTATCTGAGTTCCACGAAGATGGCCAGTCTGCTGTCCCTCTCGGATGCGTTCACTGCGGTGCTTCCTATAAAGataaaactttgttaaaaaaacatatccGTAACGGCGATTGTACGGTTTATATCGACTGCGATTTGTGCTCTGAACAATTCACGAACATGCAAGATTTTAACAATCACGCATTGTCCGTTCACGCCGAGCACTTTGTCAAATCTGAAAACCAGAGCGTCGATGGACGACTTACAGACTGCTATCTTTGTGGCACGAAGACTAGCAAATATACCGATCTGCTCAAACATTTCAAAGCTGTTCATGATAACATCCTTCATCACTGCCAGTTTTGTGGTGTTAAGTTTGAGCAACCTGTCGATCTAAACAAACACATGTACCTTGAGCACCCTGGCCAAACTCCTGACCTGCAGGCTGCAGAACCAGATATGTCTCTCGTCAAAGAAGAAGCTGAGGAATACCATTATTCTTGCACAGAGTGTAATGCAATATTTGAAACTGTAGACGCGTGGACTGACCACCAAGTAGCTGAACATAATCAAGTGGCGCACCATTGTGACCAATGTGAAAAGAAATTCTTGCGACCTTCGGAACTCGCGGAGCACAAGAACACGCACTTGAGGGTTAAGTTTTATCCATGCAGTATATGCTCAAATTCATATAGCACGCCGCAAAAGTTGTCTGACCACGTCCAAAATGTTCATCCTGGTGCAGGATCTCAGGTCAATCCAGAAAATGAATTTTTCTGCGAGATTTGTATTCGCGGTTTCAAAAGCCGTCAGGCCTACTCGAATCATATGCGCATTCATGCTAAAGTGCCGACCACAAATAGAAAGCCCGGTGAACCTAAAGGATTTGATCCACGCATCATTGGAAAACCCATTAAGCAATTCACAATATCCAACGTTGTTCCACCTGGTTTTATTAACTTCAAGCCAAATGCGAATGTTCCTAATGCTCCTTACTCTTGTGATATTTGTGGCAAAGGTTTTATgcataagaaaaatatttggaAGCACAAAAAAGTTCTGCACGCTGATATAATAAACGACAGAAACGACAGCGAAGAGAATACGATGCACGCTTCGACCGAAGAAGACGAATATAATGTTGATGAAAACGGAGCATTGCTATCAACACCACAGTTCAACAGTTTCAATTTTAccaattttactaataatacaGTGCAACCTCAGCCAGATGCTATGCCATTCTCATGCGAACTATGTTCCAAGCGATTCCCTCTTAGAACTAGTCTCTGGAAGCACAAACGCGCTAAGCATGGAATCACAAACGCAAATCCTACTGGCACCGGTGAGGTACAAGCAGCCCCTAGCGAAGGTGGTGGACGTTCGAGCTGCACCATTTGCAAAATCACGTTCTCAGACAAAAAATCTTACTATCGCCATAGAAAGAATGTTCACAAATCAGCGACGCAAATGTGCAAGATTTGTGGCAAACCTCTGAACTCAACGCAGGAATTATACGAACATCTAAAAGCAGCTCACGCTAGAGAGTTGTTGGGGTACAACGCCAATCAAAGTACGAGTAAAGTGCAGGATATATCGCAAGATATGGACGGCGAATTCGACAACGACAACGAGGCTGTAGACCCTAGCGTCGATTATCAAGCGCGGTATCCGTGCGATACTTGTGGCAAACAGTTTGTAGGATTGCTCTCCTTGCAAAATCACCAGTGTATAAATCAAGCACCTTCGCAACCGCAAACCTTCGACTGCGAGATCTGCCATAAAAGCTACACCTCCATCGCCGCATTGAAGAGTCATCGCGGCTGGCATCTTAGATCGCCCGATGGCAAAGCGGCCGCTAACAATAGCGGTCTCTGGATGCCTCAGCACAAGGTCACTAGCAAGGTCAGCAAACATGAAGTAGTAGAAACGGCTACACCGTCTTCGTCAACATCGTCAGTCGTGACTCGTCTCCATTCGACTCCCGCGTCCGTCGCGAAAAGGAGATTACCCCCCGAAGTGGAAGTCACCGTTGTGAATCCGAACAAAAAGATGCGCTCGGACGATTCTGTCGAAATGGATCAACAAAGCGATACTGCCGAAGGAAGGTACTGTACGATATGCGACAAAGATTTCACGAAACGCGCCGCTTACCAACGCCACATGGACGAGGTCCATCAACCGAATTCCGTTTTCTGTCCGGTTTGTGATAAGAGTTTTACGAGGAAATCTACTCTGCTCGTGCACATGAAGAAGCACTACGAAGGTGGCGGAGAAGGTAGTTCGACAACAGCACAAGTAGACGAAGATGAAGGCTTCTCTTGTGACCTCTGCGGTGCGCAGTACGATACTGAGAATGCTCTAAGGGCTCATCGAATCAGACATCACGGGGAGGAGTCTGGTGAGTCGGAGGACGATGGTCAAGTGCCGATCGCACAGCCTGGGGAGTTTACATGCGGCCAATGCGGCGACGGGGTCGCCACGGCACGCGATCTGATCACACATCGCGCTATACATTCAACACCTACCAAATTCTTCTGCAACATTTGCAAAGTGTATTTCGTGAGAGCACTGGATCTGTCGTCACATACGCGCGCGCGACACGCAGATAATGAGAAAGTGTTTTTCCCCTGTGCAATGTGTGACCGCTTTTACATGAACAAGAAGAGCTTGCAACGACACATCGACATGGCTCACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILALKIKDCVSVEINEDDELPTNVCRKCVDNVNNWHLFKTVCAKAQNKLLSFTRKDGSLLEEVHIKSEPFSDEAYDDGVVIDGSYPGAENASFSSKIQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILNMVQESNVIDALQAVEESDVLHHSDHESETEAELQPDLDDNFVDYKNGYACRNKNILFSKPQKVSSGPKGAIKPKKRTISSHKQYGSPKIAWQLLFTDDILELIVSSTNKNILRLGIEGCTNVAEIKSFIGILYLNGIMRPTHEKCSDLWDMKCGVPSVINAMTNERFNILLKNICFYSQEDVGSIIQFDTMKRIRKVFEIFALNCRTAFDIQSNAVIDEIIVPVYGPCPFRYDIEKKPLKRGMKLVLLVDPNNFYVSNLDVITDPYFGAKEIVKKITQHLFGTGKTIIMDSWYFSPQLLLTLKSYQLYTIAAVHPNSDEIPPLFLSEFRKNCTYVSGFLDGEISLTSHLNAQSKGLESEKDEEEEYEDEMKAPQPMKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKSQKPKLRPNPFNPKARLMPNPISHKMQLLPKLMPKMMPQRMITPPKPIPIKSSKTPHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYDENQEEEGDAEMHNNQSQNYDTVDMDSENEIEIARQQENVDENEENHDEDDNIQNDDENDDANVGEEGEKEKETENEKDLSPQASLDEEGNENMDVDVNYEAKDDERNNEEEEEGNEEGENEHDASQAEENEDDEDPPVGIAPEVELNEGTHNSNTFNSEINDDEEEPDESAEHNATADGEPDGEPDALDADKTLVTSAQRDFIKRFRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDENGITSDMIVEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSAVPLGCVHCGASYKDKTLLKKHIRNGDCTVYIDCDLCSEQFTNMQDFNNHALSVHAEHFVKSENQSVDGRLTDCYLCGTKTSKYTDLLKHFKAVHDNILHHCQFCGVKFEQPVDLNKHMYLEHPGQTPDLQAAEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQNVHPGAGSQVNPENEFFCEICIRGFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTISNVVPPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGALLSTPQFNSFNFTNFTNNTVQPQPDAMPFSCELCSKRFPLRTSLWKHKRAKHGITNANPTGTGEVQAAPSEGGGRSSCTICKITFSDKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKVQDISQDMDGEFDNDNEAVDPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQAPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVETATPSSSTSSVVTRLHSTPASVAKRRLPPEVEVTVVNPNKKMRSDDSVEMDQQSDTAEGRYCTICDKDFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSTTAQVDEDEGFSCDLCGAQYDTENALRAHRIRHHGEESGESEDDGQVPIAQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663313;
- 90% Identity
- -
- 80% Identity
- -