Gpyr003882.2
Basic Information
- Insect
- Gandaritis pyraliata
- Gene Symbol
- -
- Assembly
- GCA_947859175.1
- Location
- OX401853.1:3691762-3701932[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0044 0.25 12.1 1.5 3 23 647 668 646 668 0.96 2 24 4.3 2.5e+02 2.7 1.0 6 23 1029 1048 1025 1048 0.85 3 24 0.072 4.2 8.2 0.6 1 21 1053 1073 1053 1074 0.96 4 24 7.7 4.5e+02 1.9 0.4 1 23 1115 1138 1115 1138 0.90 5 24 0.01 0.6 10.9 1.7 5 21 1151 1167 1149 1168 0.92 6 24 0.6 35 5.3 0.4 2 23 1176 1198 1175 1198 0.89 7 24 0.029 1.7 9.5 0.3 3 23 1217 1238 1215 1238 0.94 8 24 0.096 5.6 7.8 2.2 3 23 1245 1266 1244 1266 0.91 9 24 0.14 8 7.4 0.0 1 23 1292 1315 1292 1315 0.90 10 24 0.021 1.2 9.9 3.4 1 23 1320 1342 1320 1342 0.97 11 24 0.019 1.1 10.0 0.2 1 23 1348 1371 1348 1371 0.95 12 24 0.0044 0.26 12.1 0.8 1 23 1382 1404 1382 1404 0.97 13 24 0.00019 0.011 16.3 1.8 1 23 1456 1479 1456 1479 0.97 14 24 0.0026 0.15 12.8 1.4 1 23 1539 1562 1539 1562 0.96 15 24 0.0012 0.07 13.8 2.1 2 23 1591 1613 1590 1613 0.95 16 24 0.022 1.3 9.9 0.1 2 23 1619 1641 1618 1641 0.94 17 24 0.0072 0.42 11.4 0.3 1 21 1685 1705 1685 1706 0.95 18 24 0.0013 0.078 13.7 0.6 1 23 1716 1738 1716 1738 0.93 19 24 0.0007 0.041 14.6 0.3 2 23 1833 1855 1833 1855 0.93 20 24 8.4e-08 4.9e-06 26.9 1.1 3 23 1862 1882 1861 1882 0.98 21 24 0.0058 0.34 11.7 0.4 1 23 1903 1925 1903 1926 0.95 22 24 0.38 22 6.0 0.0 1 23 1947 1969 1947 1969 0.97 23 24 0.032 1.9 9.3 0.6 1 23 1975 1998 1975 1998 0.95 24 24 0.0004 0.023 15.3 0.4 1 23 2006 2029 2006 2029 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCTCCCATCCTGGTTTCTAAAATAAAGGATTGTGTGGCTGTAGAGATCAACGAAAATGACGACCTACCGACGAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATATATTCAAGACTGTATGTTCAAAGACACAAAACAAACTACTGTCTCTCACAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCATATCAAAAGTGAACCTTTCTTCTCTGAAGAAGCTTATGATGATGGAGTGGTTATTGATGGATCATACCCTGAAGCTGAGAGTGCGGGCTTTTCCAGTAAGCTTCAGCCGGAAGGTCCACCGATCTTGGCTTCGTTGGGACTCACACCGAGGAGTGACAAGAAATATGTGGATCCACGAATGGATTGGCAACGAGTGCATGCAATACTGGATATTGTTCAAAACAGCAATATTATTGATTCACTGCAAACCGTTGAAGAAACTGATATTTTGCATCACTCCGATCACGAGTCAGAGACAGAGGCTGAGCTTCAGGCACATCTAGACGATAACTTTATTGATTGCAAAAAAGGTTATGCTTCCAAAAATAATAAAATCTTTTTGAAAAAACCTCAAAAAGTCAACTCTGAACCTAAAACTGCTATAAAAATTAAGAAACGGAGAATCACTGCGTACTGCCGTAAACCTAAAAGCGCTTGGCAGTTATTGTTTACCGATGATCTACTCGATCTCATTGTCGCATCAACAAACGAGAATTTACTTAGACATAATGGCAAAGACTTCAAAGAATTCACCAATGTTGGTGAAATAAAAACTCTTATTGGAATTTTGTACTTGAAAGGCATAATGCGGCCAACTCATCAGAAATGCAGTGACCTCTGGGACGTGAAATGTGGCGTCCCCGCTGTTATACACGCAATGAAACAAGAACGCTTCAACTTACTCATACAAAACATCTGTTTCTACAGTCAAGAGGATGACGATAGCATAATGCAGTTCGATACTATGAAACGTATTCGCAAAGTGTTCGAAATCTTTGCGTTGAATTGCAGGACAACCTTCGACGTGCAGAGTACCGCCGTCGTTGATGAGATCATTGTGCCAGTTTACGGACCTTGCCCGTTTCGATACGATATCGATAAGAAACCACTGAAAAGTGGAATTAAAATGGTGTTGCTGGTCGACCCGAGTAATTTCTATGTGAGCAATTTGGACGTGATTACCGACACATACTTCGGACCCGAGGAGATTGTGAAAAAAATCACCCAGCATTTGTATGGTACTGGGAAAACTATTATAATGGACAGCTGGTACTACTCCTCTCAGCTGTTGGCCACACTGAAGAGTTATCAGCTCTACACAGTAGCGGCATTGCACCCTACGTGCGAGGAAATTCCGCCTTTGTTTTTATCACAGTATAGAAAAAGTTGTACTTATATTTCTGGATTCGCGGACGGTGGAGTTTCGCTGACATCTCACGTAAACTCTGATTCGAAAGCCACCAACGTTGTTACAAACTTGCCACAGTTTTATCGGAAGGGTCACACAAACCGCACCACATCGATAGCAGTTTACAAGAAGAACCATTCAGCAGTGCAAGTTCTGGATGTCCTGATGCATTACTATACGACATTGCACTGTACAAACGACTGGACGCTTTCTATGTTCTTTACGTTACTCAATATCGCGTCAGTCAATGCTCAAGGGATGGAAAGTGAGAAGGATGAAGAGGAATACGATGAGGAGGTGAAGCTACCACAACCAGTGAAGGTCCCGCACATGCCCGAGGTATCCATCACCGTGATGCGGCCCACCGGCGAGACCCTCCAGTCCCGACAAGGTATCCAACAGATCGCCTCCAAGGACTGCCTCATCTGCGGACGCTCTTACAGATACTCACACAACGCGAGACGTCACGAACTCACTTCGCACAAATTCGACCGCTACACAAACAAAGTAAACAAAAAATCACACTCACACATGCAACCTAAACTCAGGCCCAACCCATTCAACCCGAAAGCGCGGCTCATGCCCAATCCCATCAGCCATAAAATGCAATTGCTACCCAAAATGATGCCGAGAATGATGCCGCAAAAAATTATCACCCCACCTAAACCTATCCCAATAAAATCTTCAAAGACGCCGCATAATAATTTGCCGTATCCACTACGCATCAAAGCTCTTAAAGATTTGCAAATAAAGAAGAAGGAACCCCAGATTTTAAAAACGTTACTCACATCTAAACCGGAAGTTCTGGTCTCTGAACCGGAAATTATGAACTCTGGCCCAGAAAGCCCGGAAACTTTGATATCTGAACCCGAAATTGCATCTTTTCAAGTTGAGACGATTTTATCAGAACCTCACGACTACGATGAAAATCAAGATGAAGATGGAGACGCAGAAGTGCATAACAGTCAGAGCCAAAACTACGACACCGTTGATATGGACTCTGAAAATGAAATAGAAATTGCCAGACAGCAGGAACATACCGATGAGAATGAGGAAAATCCAGATGAAGATGACAATAATCACGACGACGGAAATGACCTTGAAGAAACCGAAAAAGTAGTTGAAAACGACAACGAGAAAGACCTCGGTCCTCAAGATTCAGCTCCTGGTGAGGAAGGCAACGCAAATATGGATGTTGATGATAATTATGAAGCCAAAGACGACGAACCCAATAATGAGGAGGACGAAGAAGGAAATGAAGATGCTGAGAATGAAGTGGATGCCGGTCAAGCTGAAGGCCACGAAGACGAAGAGGACCCGCCAGTCGGAGTCGCACCCCAAGTCGAACTGAATGATGACTTGCAGAACAACTCCAACACGTTCAACAGCGAAACCAACGAAGATGAAGAAGAACTGGACGAAAGCGCAGACCTAAATGATACTGCCGATGGTGAACCCAAACAGCTCAATGCTGATACAACATACGTCACCAACGAACAAAGAAACTTTATCAAAAGGTTTCGTGATATTATCCTCCAGATTAACACGAAGACATGCCTATGTTGCGACAAGGAGTATCCTCGCAGAAAAGCTGTTATTCAACATCTACAGAAAAACGGACACAAAGTTCCAAAACACACATGCTACAATTGTGTCGTCACGTTTACCCATATTGGCGCGTTACTAAGCCATATGAGACAAAACTCATGTACCGATCTATGGAAGATCATCTACGACGAGAACGGTATCACTAACGATATGATCGTTGAGGAACCCAAGGGAGCCAAAATTCAAGCCAAAGATATTTTCAATGCGAAGTCTTATGCGTGTAGATTGTGTCCGGCTAAATTCCAGCTGAAACAGTCTATTATGAAACATGTTTCAGAGTTCCATGAAGATGGCCAGTCTTCAGTTCCACTCGGCTGCATCCATTGCGGAGCCACCTTTAAAGATAAATCTTTTCTCAAAAAACATACTCGCAACGGCGACTGTACAGTTTACATCCACTGTGACCTGTGCTCTGAACAATTCACCAACATGCAAGACTTTAATGATCATGCGTTGGCAGTTCATGCTGAGCACTTCGTCAAAACTGAAAATCAGAGCACCGATGGACGCCTCACAGACTGTTATCTTTGTGGCACGAAGACTAGCAGCTATCCAAATTTGCTTAAACATTTAAAAGCGGAGCATGACGATGTCCCGCAACACTGCAAGTGTTGTGGCGTCAAGTTTGAGCAACCTGTTGAACTAAACAAGCACATGTACCTGGAGCATCCTAGCGCGACTCCAGACATGCCTGCCGTGCAACCAGACATGTCACTCGTCAAAGAAGAAGCCGAGGAATACCACTACTCATGCACAGAGTGCAATGCAATATTTGAAACTGTAGATGCGTGGACTGACCATCAAGTAGCCGAGCACAACCAAGTGGCGCACCATTGCGATCAGTGCGAAAAGAAATTTTTGAGACCCTCCGAGCTCGCAGAGCACAAGAATACCCACCTTAGAGTCAAGTTTTATCCCTGCAACTTATGCTCAAATTCGTATAGCACCCCACAAAAGCTGTCTGATCATGTTCAAAACGTTCATCCTGGAACTCAGACCAACACGGATAATGAATTTTTCTGCGACATTTGTATTCGAGCATTCAAAAGCCGCCAGGCGTACTCGAATCATATGCGCATCCATGCCAAAGTACCGACGACCAATAGAAAACCCGGTGAACCGAAAGGATTCGACCCACGTATTATAGGAAAACCTATCAAGCAGTACACGATATCCAACGTGGTTCCTCCTGGGTTTATTAATTTCAAGCCAAATGCCATCGTTCCTAATGCTCCTTATTCGTGTGATATTTGCGGGAAAGGCTTCATGCATAAGAAGAATATTTGGAAGCACAAAAAAGTACTGCATGCTGATATAATAAACGACCGAAATGACAGCGAAGAGAATACAATGCATGCATCTACAGAAGAAGATGAATATAATGTTGATGAAAACGGGGCAGCACTATCAACTCCACAATTCAATAGTTTCAATTTTACAAATTTCACAAACAATGTAGTGCAAGCTCAGGCAGATCCTATGTCATTTTCTTGCGAACTGTGTTCCAAGCGGTTTCCGCTTAGAACTAGCCTGATAAAGCACAAACGCGCTAAGCATGGAATCACAAATGCTAATCCCGGCGGTCATGCCGAAACTCAGGCACAAGCTTCCCCAGTTGAAGGCCAAAGTGGTGGTAGATCGAGCTGTACCATTTGTAAAATTACGTTCTCAGACAAAAAATCTTACTATCGACACAGGAAGAACGTTCACAAATCAGCGTCACAAATGTGCAAGATTTGTGGCAAGCCACTCAATTCTACGCAGGAACTGTACGAACATCTGAAGGCGGCCCACGCCAGGGAGTTGCTGGGTTATAACGCCAATCAAAGTACGAGTAAGGCTCAGGATGTATCGCAAGATATGGACGGCGAGTTTGACAACGATCAAGAATTAGCAGATCCCAGCGTGGATTATCAAGCACGGTATCCGTGCGATACTTGCGGCAAACAGTTTGTGGGACTACTCTCGTTGCAAAATCACCAGTGTATAAATCAATTACCATCTCAACCCCAGACATTCGACTGTGAGATCTGTCATAAAAGCTACACCTCCATCGCAGCATTGAAGAGTCATCGCGGCTGGCACCTGCGCTCGCCCGATGGCAAGGCGGCCGCTAATAACAGCGGTCTTTGGATGCCGCAACATAAGGTCACCAGCAAGGTCAGCAAACACGAGGTCGTAGAAACGGCCGCACCGGCTGCACCAACATCGACAGTTATGACAACACGGCTCAGCTCGACGCCCGCGGCTGTGGCAAAACGGAGATTACCTCCTGAAGTAGAAGTTACTGTCGTGAATCCGAACAAAAAGATGCGCTCGGACGACTCTGTCGAGATTGACCAGCAAAATGATGGCTCCGAAGGTAGGTACTGTACGATATGCGAGAAAGATTTTACGAAACGCGCGGCATATCAACGTCACATGGACGAGGTTCATCAACCGAATTCAGTTTTTTGTCCAGTCTGTGATAAAAGTTTTACGAGAAAATCTACGTTGATCGTACACATGAGAAAGCATTACGGAGGTGACGGAGAAGGTAGTTCATCGACGACGGCACAGGTGGACGAGGATGAGGGGTTTTCGTGTGATCTCTGTGGCGCGCAGTACGATACCGAGAATGCTTTAAGGGCGCATCGGATCAGGCATCATGGGGAGGACTCGGGGGAATCGGAGGATGATGGCCAAGTGCCGATAACACAACCTGGGGAGTTCACGTGCGGTCAGTGCGGCGACGGCGTCGCTACTGCGCGGGATTTGATCACACATCGCGCGATACATTCAACACCTACGAAGTTCTTCTGCAACATTTGCAAAGTGTATTTCGTGAGAGCATTAGATCTGTCCTCGCACACGCGTGCGCGGCACGCAGACAATGAGAAAGTGTTCTTCCCATGCGCCATGTGTGACCGCTTCTACATGAACAAGAAGAGCTTGCAACGTCACATTGACATGGCTCACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILVSKIKDCVAVEINENDDLPTNVCRKCVDNVNNWHIFKTVCSKTQNKLLSLTRKDGSLLEEVHIKSEPFFSEEAYDDGVVIDGSYPEAESAGFSSKLQPEGPPILASLGLTPRSDKKYVDPRMDWQRVHAILDIVQNSNIIDSLQTVEETDILHHSDHESETEAELQAHLDDNFIDCKKGYASKNNKIFLKKPQKVNSEPKTAIKIKKRRITAYCRKPKSAWQLLFTDDLLDLIVASTNENLLRHNGKDFKEFTNVGEIKTLIGILYLKGIMRPTHQKCSDLWDVKCGVPAVIHAMKQERFNLLIQNICFYSQEDDDSIMQFDTMKRIRKVFEIFALNCRTTFDVQSTAVVDEIIVPVYGPCPFRYDIDKKPLKSGIKMVLLVDPSNFYVSNLDVITDTYFGPEEIVKKITQHLYGTGKTIIMDSWYYSSQLLATLKSYQLYTVAALHPTCEEIPPLFLSQYRKSCTYISGFADGGVSLTSHVNSDSKATNVVTNLPQFYRKGHTNRTTSIAVYKKNHSAVQVLDVLMHYYTTLHCTNDWTLSMFFTLLNIASVNAQGMESEKDEEEYDEEVKLPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKVNKKSHSHMQPKLRPNPFNPKARLMPNPISHKMQLLPKMMPRMMPQKIITPPKPIPIKSSKTPHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPHDYDENQDEDGDAEVHNSQSQNYDTVDMDSENEIEIARQQEHTDENEENPDEDDNNHDDGNDLEETEKVVENDNEKDLGPQDSAPGEEGNANMDVDDNYEAKDDEPNNEEDEEGNEDAENEVDAGQAEGHEDEEDPPVGVAPQVELNDDLQNNSNTFNSETNEDEEELDESADLNDTADGEPKQLNADTTYVTNEQRNFIKRFRDIILQINTKTCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDENGITNDMIVEEPKGAKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPLGCIHCGATFKDKSFLKKHTRNGDCTVYIHCDLCSEQFTNMQDFNDHALAVHAEHFVKTENQSTDGRLTDCYLCGTKTSSYPNLLKHLKAEHDDVPQHCKCCGVKFEQPVELNKHMYLEHPSATPDMPAVQPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNLCSNSYSTPQKLSDHVQNVHPGTQTNTDNEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQYTISNVVPPGFINFKPNAIVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGAALSTPQFNSFNFTNFTNNVVQAQADPMSFSCELCSKRFPLRTSLIKHKRAKHGITNANPGGHAETQAQASPVEGQSGGRSSCTICKITFSDKKSYYRHRKNVHKSASQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKAQDVSQDMDGEFDNDQELADPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQLPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVETAAPAAPTSTVMTTRLSSTPAAVAKRRLPPEVEVTVVNPNKKMRSDDSVEIDQQNDGSEGRYCTICEKDFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMRKHYGGDGEGSSSTTAQVDEDEGFSCDLCGAQYDTENALRAHRIRHHGEDSGESEDDGQVPITQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663313;
- 90% Identity
- -
- 80% Identity
- -