Ptra033239.2
Basic Information
- Insect
- Philereme transversata
- Gene Symbol
- -
- Assembly
- GCA_963924445.1
- Location
- OZ004355.1:7543913-7552457[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0049 0.48 12.0 1.5 3 23 674 695 673 695 0.96 2 24 5.1 5e+02 2.5 1.1 4 23 1053 1074 1051 1074 0.84 3 24 0.081 7.9 8.2 0.6 1 21 1079 1099 1079 1100 0.96 4 24 8.6 8.5e+02 1.8 0.4 1 23 1140 1163 1140 1163 0.90 5 24 0.00011 0.011 17.3 0.4 3 21 1174 1192 1172 1193 0.94 6 24 0.36 36 6.2 0.6 3 23 1202 1223 1200 1223 0.93 7 24 0.41 40 6.0 0.8 3 23 1242 1263 1240 1263 0.92 8 24 0.00088 0.086 14.4 0.9 1 23 1268 1291 1268 1291 0.93 9 24 0.15 15 7.3 0.0 1 23 1317 1340 1317 1340 0.90 10 24 0.023 2.3 9.9 3.4 1 23 1345 1367 1345 1367 0.97 11 24 0.015 1.5 10.5 0.2 1 23 1373 1396 1373 1396 0.95 12 24 0.0096 0.94 11.1 0.8 1 23 1409 1431 1409 1431 0.97 13 24 0.00022 0.021 16.3 1.8 1 23 1483 1506 1483 1506 0.97 14 24 0.0032 0.32 12.6 1.5 1 23 1566 1589 1566 1589 0.96 15 24 0.0025 0.25 13.0 1.5 2 23 1616 1638 1615 1638 0.95 16 24 0.024 2.4 9.9 0.1 2 23 1644 1666 1643 1666 0.94 17 24 0.0081 0.79 11.4 0.3 1 21 1710 1730 1710 1731 0.95 18 24 0.0015 0.15 13.7 0.6 1 23 1741 1763 1741 1763 0.93 19 24 0.00013 0.013 17.0 0.4 2 23 1852 1874 1851 1874 0.93 20 24 4.1e-07 4e-05 24.9 1.4 3 23 1881 1901 1880 1901 0.98 21 24 0.014 1.4 10.6 0.5 1 23 1921 1943 1921 1944 0.95 22 24 0.42 41 6.0 0.0 1 23 1966 1988 1966 1988 0.97 23 24 0.036 3.6 9.3 0.6 1 23 1994 2017 1994 2017 0.95 24 24 0.00045 0.044 15.3 0.4 1 23 2025 2048 2025 2048 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTCCCTACCACCAGTTCGGATGACTTGGAACCTCCCATCCTTGCTTCAAAAATAAAGGATTGTGTGGATGTACAGATTCACGAAAATGATTACCTGCCGACAAATGTCTGCAGAAAATGCGTAGACAATGTCAACAACTGGCATTTATTCAAGACTGTCTGTGAAAAGACACAAAACAAACTACTGTCTATCATAGGAAAGGATGGAAGCCTACTAGAAGAGGTGCATATCAAAAGTGAACCATTGTCTGATGAGGCTTATGATGATGGAGTGGTTATTGATGGCTCATATCCTGATGCTGAGAATGCGGGTTCGAGCAAGCTACAGCCAGAAGGGCCACCGATCTTGGCATCGTTGGGACTCACACCAAGGAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCAACGAGTCCATGCAATATTGGATATGGTTCAAGAGAACAAAGTCATTGACTCACTGCAATCCGTTGAAGAGAGTGATGTTTTGCACCATTCTGATCATGAGTCAGACTCGGAGACCGAACTCCAACCAGACCAAGACAATATTTTTATCGATTACAAAAAAGGCTATGcttgtagaaataaaaaactctTGTTCAAAAATCCTCTAAAAGGCTGCAGTGCAACCAAAGATGCtatgaaatttaaaaaacgaaAATTCAATGACCATCAGCATTGTGCTACACCGAAAAGTGCTTGGCAGCTACTGTTCACGGATGATCTGCTCGATCTCATTGTGTCATCAACGAACGAGAACATGCTCAGATCTGACAAAGGCTTTTTAGGGTGCACCAAAGCTGAAGTCAAAACTCTTGTTGGAATTTTGTACTTGAACGGTATAATGAGGCCAACTCATCAGATATGCGGTGACCTCTGGGACAAAAAGTGTGGCGTCCCGTCCATTATAAACGCAATGACAAAGGAACGTTTCAACTTTCTTATACAAAACATCTGTTTCTACAGCCAAGAGGATGAAGCTAGCATTATGCAGTTCGATACTATGAAACGAATACGCAAAGTGTTTGAAATCTTCGCCATGAACTGCAGGACAACCTTCGACGTCGAGAGTACAGCCGTCGTTGATGAGATCATTGTGCCGGTTTATGGACCTTGTCCATTTAGATACGATATCGATAAGAAACCACTCAAACGTGGAATAAAAATGGTATTACTGGTTGATCCGAATAATTTCTATGTGAGCAATTTGGATGTGATTACGGATCCTTACTTTGGAGCTGAAGAGATTGTGAAGAAAATCACTCAGCATTTGTATGGTACTGGAAAAATAATCATTATGGACAGCTGGTACTATTCCTCACAGTTGATGGATACATTGAAGAAGTATCATCTCTATACGTTAGCGTCGATGCATCCAACGAGCGATGAAATACCGCCGCTCTTTCAATCGCAGTTCAGAAAAAGCTGTTCCTACATTTCTGGGTTCGTTGACGGCGAAGTCTCCTTGACGTCTCATGTAAACTCACAGTCGAAAGTATCCAACGTCGTAACAAACGAGCCTCGTTTTTATCGGAAAGGTCACACGAACCGTACAACATCGGTATCAGCTTATAAAAAGAATCAATCTGCAGTGGAAGTTCTAGACGTTCTGATGCATTATTATACGACATTGCAACATACAAACGACTGGACACTTTCAGTGTTCTGTACGTTGCTCAATATTGCTTCGGTTAATGCTCAAGTAATTTGGAGCTCGCGAAATACTTTAGCCACTCCAAGACGTTTGTTTATCAGGGATTTGGGCTTGGGTCTGTTAGAGGATGAGGGTCTGGAGAGTGAGAAGGAAGAGGAAGATGAGTATGATGACGAGGCGAAAACCCCGCAACCAGTGAAGGTCCCGCACATGCCAGAGGTATCCATCACCGTGATGCGGCCCACGGGGGAAACGCTGCAGTCCCGCCAAGGTATTCAACAGATAGCCTCCAAGGACTGTCTCATCTGCGGCCGTTCTTACAGATACTCTCACAATGCAAGGCGACACGAACTCACCTCGCACAAATTTGACCGCTACACAAACaaaatcaataacaaaaaacatTCTCGCATGCAACCCAAACTTAGACCCAACCCTTTCAACCCGAAAGCGAGGCTCATGCCTAATCCTATCAGCCATAAAATGCAATTTTTACCCAAAATGCCAAAATTGATGTCGCAACTCAATCAAGTAAACAAGAAAATTATAACACCACCGAAACCGATACCCATTAAATCGTCCAAAGCGCCACAAAACAATTTGCCGTATCCATTGCGCATCAAAGCCCTCAAAgatttgcaaataaaaaaaaaagaaccgCAGATTTTGAAAACATTATTAACATCGAAACCGGAAGTGCTTGTGTCAGAACCAGAGATTATGAACTCTGGCCCAGAGAGCCCAGAAACTCTCATATCTGAGCCCGAAATTGCGTCTTTCCAAGTAGAGGCAATTCTTTCGGAGCCCAACGATTACGATGAAAATCAAGAAGAGGAAGAGGATTCTGAAACGCATAACAATCAGAATCAAAATTACGACACCGTCGATATGGACTCCGACCATGAAATAGAAATTGCACGACAACAGGAAAATGTTGATGAGGCCGAAGAAAATCATGACGAAGATGACATTAATCAGCATGACGACGAACATAACTTTGAAGAAGCTGACAAAGTAGGTGAAAATGAAAGTGAAAAAGATCTCAGTCCTCAAGAGGCCGGTCTCGGCGAAGAAGGCAACGAAAATATGGATATTGACGAAACGTATGAAGCCAAAAACGATGAACGTAATGAAGAAGACGAAGAAGCAAATGAGGAAGCTGAAAATGAAGAACTTGATGCCAGTCAGGGCGCTGCAGAAAACGAGGACGATGATGACAACCCGCCGATTGGATTAACGCCTGAAGTAGAATTAAACGAAGATGTACACAACTCTAACAATAGCGAGATAAACGACGACGACGAACCCGAGGAAAGCGCACATGTTAATGATACTGCGGAAGGCGAGGCGGACAAATCGTACATCACCACCGATCAGAAAGACTTCATCAAAAGATTCCGCGATATTATCCTACAGATCAACACAAAAAGATGTCTGTGTTGCGACAAAGAGTATCCGCGTAGAAAAGCAGTTATACAACATCTACAGAAAAATGGACACAAAGTTCCAAAACATACATGCTACAATTGCGTGGTTACTTTTACCCATATTGGCGCATTACTCAGCCACATGAGACAAAACTCTTGCACCGATCTTTGGAAGATTATCTATGATGAGAATGGAATCCAGAGCGACATGGTCATCGAGGAACCTAAAAGCAAAATTCAAGCCAAAGATATTTTCAATGCGAAATCTTATGCGTGTAGATTGTGCCCCGCCAAATTCCAGCTAAAACAATCTATCATGAAGCACGTTTCTGAGTTCCACGAAGATGGCCAGTCTGGAGTTCCTCTCGCCTGCGTACACTGTGGAGTCTCCTTCAAAGATAAAACATTGCTTAAGAAACACATCCGTAACGGCGATTGTACCGTTTACGTACATTGCGATTTATGTTCTGAACAATTCACGAACATGCAAGACTTTAATGATCATGCATTGTCGGCTCACGTCGAGCACTTCGTCAAAAGCGAAAATCAGAGCGCCGATGGACGACTCACTGACTGCTATCTGTGCGGAACGAAGACTAACAACTACACAAGTCTACTGAAACATTTCAAAGCGGTGCATGATGAATTACAGCATAATTGCCAATTTTGTGGTGTGAAATTTGAGCAACCAGTTGATCTaaacaaacatatgtacctGGAGCATCCTGGTCAAACTCCGGACTTACAGACCACTCAACCAGACATGTCGCTCGTCAAAGAAGAAGCTGAGGAATACCACTATTCTTGCACAGAGTGCAATGCAATATTCGAGACTGTAGACGCGTGGACCGATCACCAGGTCGCTGAACATAACCAAGTGGCGCACCATTGCGACCAATGTGAAAAGAAGTTCTTGCGGCCGTCAGAGCTCGCGGAGCACAAGAATACTCATTTGAGAGTTAAATTCTATCCTTGCAGTATCTGCTCTAACTCGTACAGCTCCCCGCAAAAGCTGTCAGACCACGTTCAAAACGTTCATCCCGGTGCAGCGTCCCAAATCAATACCGAAAATGAATTCTTCTGTGAAATTTGTATTCGAGGTTTCAAAAGTCGTCAAGCTTACTCTAATCATATGCGCATTCATGCAAAAGTGCCGACCACCAATAGAAAACCCGGTGAACCTAAAGGTTTTGACCCGCGAATCATCGGGAAACCCATCAAACAATTCACTATGACCAATGTAGTTCAACCTGGTTTCATTAATTTTAAGCCAAATGCGATTGTTCCGAATGCTCCTTATTCGTGCGATATTTGCGGCAAAGGCTTCATGCACAAGAAAAATATCTGGAAACACAAGAAAGTGTTGCATGCCGATATAATAAACGACAGAAACGACAGCGAAGAGAACACCATGCACGCGTCGACTGAAGAAGATGATTATAATGTCGATGAAAATGGCGCATTACTATCAACGCCACAatttaatagttttaattttaccAATTTCGCTAATAGTTCGATGCTGCCCCAGGCTGATCCTATGCCTTTCTCCTGCGAATTATGTTCTAAGCGATTCCCACTTAAGACTAGTCTGGTGAAGCATAAACGAGCTAAGCACGGTATCACGAATGCAAATCCTATGGGGAACAGCGAGCATCACAATACTTCTGGTGAAGGACAAAGTGGTGGCCGATCAAGCTGTACGAtttgtaaaattacatttgCAGACAAAAAGTCTTACTATCGTCACAGAAAGAACGTTCACAAATCAGCGACCCAAATGTGCAAGATATGCGGTAAGCCGCTGAACTCCACCCAGGAGCTGTACGAACATCTGAAAGCGGCTCACGCCAGGGAGTTGCTCGGTTATGATCCTAATCAAGGCAAGAGTAAAGCTCAAGATGTTTCACAAGATATGGACGGCGAATTCGAGAACGAACAAGATTCTGCAGATCCTAGCGTCGATTATCAAGCCCGGTATCCTTGCGATACCTGTGGCAAACAATTTGTGGGATTGCTCTCTTTGCAAAATCATCAGTGTATAAATCAAGCCCCTTCACTACCCCAGACCTTTGATTGTGAAATCTGTCACAAAAGCTACACTTCCATCGCCGCATTGAAGAGCCATCGCGGCTGGCATCTTCGATCTCCCGATGGCAAGGCGGCCGCTAACAATACCGGCCTTTGGATGCCTCAGCACAAGGTCACCAGTAAAGTCAGCAAACACGAAGTCATTGAACCTACGCCGATCGTGACTAGGCTCCAGCAATCCATAGCTCCTGCGGCCGCGGCCAAAAGGAGGTTACCTCCTGAAGTCGAAGTGACCGTCGTTAATCCAAACAAAAAAATGCGTTCGGACGATTCCGTCGAAATGGATCAACAAAGCGATGCAGTCGAAGGGAAGTACTGTACGATATGCGACAAGGAGTTCACTAAACGCGCCGCATACCAACGCCACATGGACGAGGTCCATCAGCCGAATTCCGTATTTTGTCCGGTCTGCGATAAGAGTTTTACACGAAAATCTACTTTGCTCGTTCACATGAAAAAGCACTACGAAGGTGGCGGGGAGGGTAGTTCAACGACAGCTCAGGTGGACGAAGATGAAGGCTTTTCGTGTGATCTCTGCGATGCGCAATACGATACTGAAAACGCTTTGAGGGCGCACCGGATCAGGCATCACGGTGAGGAATCTGGGGAATCTGACGACGATGGCCAACCGATGACTATCGCGCAACCGGGGGAATTCACTTGCGGTCAATGCGGGGACGGCGTCGCTACAGCGCGCGATCTGATAACGCATCGTGCTATTCACTCCACTCCTAGTAAATTCTTTTGTAACATTTGCAAAGTGTATTTCGTGAGAGCGCTGGACTTATCCTCACATACACGTGCGCGACACGCAGACAACGAGAAAGTGTTCTTCCCGTGTGCCATGTGCGATCGCTTCTATATGAACAAGAAAAGTTTACAACGACATATCGACATGGCCCACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRGELLPIFPTTSSDDLEPPILASKIKDCVDVQIHENDYLPTNVCRKCVDNVNNWHLFKTVCEKTQNKLLSIIGKDGSLLEEVHIKSEPLSDEAYDDGVVIDGSYPDAENAGSSKLQPEGPPILASLGLTPRSDKKCVDPRMDWQRVHAILDMVQENKVIDSLQSVEESDVLHHSDHESDSETELQPDQDNIFIDYKKGYACRNKKLLFKNPLKGCSATKDAMKFKKRKFNDHQHCATPKSAWQLLFTDDLLDLIVSSTNENMLRSDKGFLGCTKAEVKTLVGILYLNGIMRPTHQICGDLWDKKCGVPSIINAMTKERFNFLIQNICFYSQEDEASIMQFDTMKRIRKVFEIFAMNCRTTFDVESTAVVDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDPNNFYVSNLDVITDPYFGAEEIVKKITQHLYGTGKIIIMDSWYYSSQLMDTLKKYHLYTLASMHPTSDEIPPLFQSQFRKSCSYISGFVDGEVSLTSHVNSQSKVSNVVTNEPRFYRKGHTNRTTSVSAYKKNQSAVEVLDVLMHYYTTLQHTNDWTLSVFCTLLNIASVNAQVIWSSRNTLATPRRLFIRDLGLGLLEDEGLESEKEEEDEYDDEAKTPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKHSRMQPKLRPNPFNPKARLMPNPISHKMQFLPKMPKLMSQLNQVNKKIITPPKPIPIKSSKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYDENQEEEEDSETHNNQNQNYDTVDMDSDHEIEIARQQENVDEAEENHDEDDINQHDDEHNFEEADKVGENESEKDLSPQEAGLGEEGNENMDIDETYEAKNDERNEEDEEANEEAENEELDASQGAAENEDDDDNPPIGLTPEVELNEDVHNSNNSEINDDDEPEESAHVNDTAEGEADKSYITTDQKDFIKRFRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDENGIQSDMVIEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSGVPLACVHCGVSFKDKTLLKKHIRNGDCTVYVHCDLCSEQFTNMQDFNDHALSAHVEHFVKSENQSADGRLTDCYLCGTKTNNYTSLLKHFKAVHDELQHNCQFCGVKFEQPVDLNKHMYLEHPGQTPDLQTTQPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSSPQKLSDHVQNVHPGAASQINTENEFFCEICIRGFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTMTNVVQPGFINFKPNAIVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDDYNVDENGALLSTPQFNSFNFTNFANSSMLPQADPMPFSCELCSKRFPLKTSLVKHKRAKHGITNANPMGNSEHHNTSGEGQSGGRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHARELLGYDPNQGKSKAQDVSQDMDGEFENEQDSADPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQAPSLPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVIEPTPIVTRLQQSIAPAAAAKRRLPPEVEVTVVNPNKKMRSDDSVEMDQQSDAVEGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSTTAQVDEDEGFSCDLCDAQYDTENALRAHRIRHHGEESGESDDDGQPMTIAQPGEFTCGQCGDGVATARDLITHRAIHSTPSKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663313;
- 90% Identity
- -
- 80% Identity
- -