Lsuf009144.2
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- -
- Assembly
- GCA_948098915.1
- Location
- OX402546.1:14300157-14309159[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.005 0.43 12.0 1.5 3 23 692 713 691 713 0.96 2 24 5.2 4.5e+02 2.5 1.1 4 23 1079 1100 1077 1100 0.84 3 24 0.082 7.1 8.2 0.6 1 21 1105 1125 1105 1126 0.96 4 24 8.8 7.6e+02 1.8 0.4 1 23 1167 1190 1167 1190 0.90 5 24 0.0012 0.11 13.9 0.7 3 21 1201 1219 1201 1220 0.96 6 24 1 86 4.8 0.7 2 23 1228 1250 1227 1250 0.88 7 24 0.58 50 5.5 0.6 3 23 1269 1290 1267 1290 0.92 8 24 0.0071 0.61 11.5 4.3 1 23 1295 1318 1295 1318 0.95 9 24 0.16 14 7.3 0.0 1 23 1341 1364 1341 1364 0.90 10 24 0.024 2 9.9 3.4 1 23 1369 1391 1369 1391 0.97 11 24 0.011 0.95 10.9 0.2 1 23 1397 1420 1397 1420 0.95 12 24 0.0098 0.84 11.1 0.8 1 23 1433 1455 1433 1455 0.97 13 24 0.00022 0.019 16.3 1.8 1 23 1506 1529 1506 1529 0.97 14 24 0.0031 0.27 12.7 1.4 1 23 1589 1612 1589 1612 0.96 15 24 0.0022 0.19 13.2 1.4 2 23 1641 1663 1640 1663 0.95 16 24 0.025 2.1 9.8 0.1 2 23 1669 1691 1668 1691 0.94 17 24 0.0082 0.71 11.4 0.3 1 21 1735 1755 1735 1756 0.95 18 24 0.0015 0.13 13.6 0.6 1 23 1766 1788 1766 1788 0.93 19 24 0.00023 0.02 16.2 0.3 2 23 1882 1904 1882 1904 0.93 20 24 4.2e-07 3.6e-05 24.9 1.4 3 23 1911 1931 1910 1931 0.98 21 24 0.0066 0.57 11.6 0.4 1 23 1951 1973 1951 1974 0.95 22 24 0.43 37 5.9 0.0 1 23 1995 2017 1995 2017 0.97 23 24 0.037 3.2 9.3 0.6 1 23 2023 2046 2023 2046 0.95 24 24 0.00046 0.04 15.3 0.4 1 23 2054 2077 2054 2077 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAGTTACTGGCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCTCCCATCCTCGCTTCCAAAATAAAGGATTGTGTGTCTGTAGAGATAAACGAAAATGACGACCTGCCGACGAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACTGTATGTGCAAAGACACAAAACAAACTACTGTCTCTCACAAGAAAAGATGGAAGCCTACTAGAAGAGGTGCACATCAAAAGTGAACCCTTTGATGAAGCTTATGATGATGGAGTGGTTATTGATGGCTCTTACCCTGATGCAGAGAATTCCAATTTTTCAAGTAAACTGCAGCCCGAAGGACCTCCTATTCTGGCATCATTGGGACTCACACCCAGAAGCGATAAGAAATGTGTGGATCCAAGAATGGATTGGCAACGAGTTCATGCAATATTGGATATAGTTGAAGAGAGCAATGTCATAGATTCCCTGCAAACCGTTGAAGAGAGTGATATTTTGCACCATTCCGATCACGAATCAGACACAGAAGCAAAGCTTCAGCCAGACTTAGATAGTACTTTTATTAATTGTAAAAATGGCTATGCTTGTAGAAATAAAAACATCTTGTCTAAATATCCTCTAAAAGTCGGTGCAGAAACCAAAAATGCTATAAAACTGAAAAAACGGGCAATCAAGGTTCAAAAGTATTGCGGTCAAGCAAAAAGTGCTTGGCAATTACTGTTCACTGATGATATACTAGATACCATTGTCTCCTCAACAAATGCGAATATACTCAGACACGACAATGGTTTTGGAAAGGGCACATATGTTGCTGAAGTCAAAACTCTAATTGGAATTTTGTACTTGAACGGCATAATGAGGCCAACTCATCAGAAATGCAGTGACCTCTGGGATAAGAAATGCGGCGTCCCGTCCGTTATAAACGCAATGACTCACGAACGTTTTAATTTTCTTTTACGAAACCTCTGCTTCTATAGCCAAGATGATGACGATTTAATGCAGTTTGATACTATGAGACGTATTCGCCAGGTTTTCGAAATCTTCGCATTGAACTGCAGAACAGCTTTCGATGTAGAGAGCACCGCCGTTATTGATGAGATCATTGTCCCAGTTTATGGTCCGTGCCCGTTTAGATACGTTATTGAAAAGAAACCACTGAAACGTGGTGTGAAAATGGTGTTGCTAGCAGATCCAAATAATTTCTATGTAAGCAATTTGGACGTGATTACCGATCCGCTTTTCAGTGCAGAAGAAATTGTAAAAAAAATTACTCAGCATTTGAGTGGTACTGGTAAAACTATTATAATGGATAGCTGGTACTTCTCCCCTCGGTTGCTGCATACACTGAAGAGTTATCAACTTTACACAATAGCTGCGGTGCCTCCGAAGAGTGATGAAATACCACCACTGTTTCTATCGGAGTTCAGGAAAAACTGTACATACATTTCTGGTTTCATGGACGATGAAATCTCGCTGACGTCTCACGTGGACTCCCAGTCAAAGGTGACCAACGTCCTCACAAACACGCCACAGTTTTATCGAAAAAGTAACATGAAACACACTTCTGTATCAGTATACAAGAAGAATCAACCAACAGTGCAAGTTCTGGATGTCCTTATGCATTATTACACGACGATGCAACACTCAAATGATTGGGCACTCTCCTTGTTCTTTACTTTGCTTAATATTGCTTCAGTCAATGCTCAAGTTATATGGAGCTCTCGAAATAAATCTGTCACTCCAAGGCGTTCGTTTATAAGAGATTTGGGGCTGAGTTTAATGGAGGATGAGTTGTTATCAGCACCACTGAATACTATTGGCGAATCAGTGGCCCAAAAAAGTGTCAGAGGACTAGAAAGCGAGAAGGACGATGATGAGGAATATGAGGACGAGGTGAAAGCTCCTCAGCCGGTAAAGGTACCACACATGCCTGAGGTGTCCATCACCGTGATGAGGCCAACCGGAGAGACACTACACGCACGTCAAGGTATCCAACAGATCGCCTCTAAAGACTGCCTCATCTGCGGCCGCTCCTATAGATACTCCCACAACGCGAGGCGACACGAACTCACGTCACACAAATTTGACCGCTACACCAACAAAATAAACAACAAAAAATCACACTCGCGCATGCAACCCAAACTCAGGCCGAACCCTTTCAACCCTAAAGCGCGGCTCATGCCCAATCCCATCAGCCATAAAATGCAATTATTACCCAAACTTATGCCAAAAATGATACCACAGAAAATTATTACCCCACCTAAACCAATACCTATAAAATCTTCCAAGACAGCACATAATAATTTACCGTATCCGCTAAGAATAAAAGCCCTCAAAGATTTGCAAATTAAAAAAAAGGAACCACAGATTTTGAAAACATTACTCACATCGAAACCAGAAGTCTTGGTGTCGGAGCCAGAGATCATGAACTCGGGCCCTGAAAGTCCAGAAACTCTGATTTCTGAACCTGAAATTGCGTCATTCCAAGTTGAGGCGATACTGTCGGAACCTAACGACTATGATGAAAACCAGGACGAAGAAGGTGACGCAGAATTGCATAACAACCAGAGTCAAACTTACGACACCGTTGATATGGACTCTGAAAATGAAATAGAAATTGCACGGCAGCAAGAGAATGTCGATGAAAATATCGGCGATAATGAAGAAAATCAGGATGAAGACGAAAATAATGAGAACGATGATGAAAACGCCGGTGAAGAAGGCGACAAAGTGGTAGAAAATGAAAGTGAAAAGGACCTTAGTCCCCAAGAAGCAAATCCTGGTGAGGAAGGCAACGAGAATATGGATGTTGACGTCAATTACGAAGCCAAAGATGATGAACCTAATAATGAAGAGGAAGAAGAAGGTAATGATGAAGGTGAAAATACACCCGATGCCAGCCAGACTGAAGATAATGAAGACGATGAAGATCCGCCGGTCGGACTAGCGCCGGAAGTCGAGTTGAATGAAGAAATGCAAAACTCCAACACGTTTAATAGCGAGTTGAACGACGACGAAGACGAACCGGACGAAAGCGCCGAACACAACGATACTGCTGATGTTGATCCCAAAGCACTCGAACTCGAATCTGACAAAGCATTAGTCACCAGCGCACAAAGAGACTTCATAAAAAGGTTTCGTGATATAATCTTACAGATCAACACAAAGAGATGCCTGTGCTGCGATAAGGAGTATCCTCGCAGAAAAGCTGTTATTCAACATCTACAAAAAAATGGACACAAAGTTCCTAAACACACTTGCTACAATTGTGTTGTTACTTTTACCCACATTGGAGCTCTACTCAGTCACATGAGACAGAACTCTTGTACAGATTTATGGAAAATTATCTACGACGAGAATGGTATCATAGCTAGCGATATTGTCGTTGAAGAGCCTAAGGGTAAAATTCAAGCCAAAGATATTTTCAATGCAAAATCTTATGCATGTAGATTGTGTCCTGCTAAATTCCAACTGAAGCAGTCTATCATGAAACATGTTTCAGAGTTCCACGAAGATGGTCAGTCTGCAGTTCCTCTTGGATGCGTCCATTGTGGAGCCTCGTACAAAGATAAAACATTACTTAAAAAACATATCCGCAACGGCGATTGTACGGTTTACATCCATTGTGATTTATGTTCTGAACAATTTACTAATATGCAAGACTTCAACGATCATGCATTGTTTGTACACGCTGAGCACTTTGTCAAATCTGAAACTCAGAGCGTCGATGGAAGACTCACAGATTGCTATCTTTGCGGTATGAAGACTAGTAAATATACAGATCTGCTTAAACATTTCAAAGCTGCACACGATGAAGCCATACATCACTGCCAGTTTTGTGGTGTCAAGTTTGAACAAGCAGTTGATCTAAACAAACACATGTGCCTGGAACATCCTGGACAAACTCCAGGCTCGGAACCGGACATGTCTCTCGTCAAAGAAGAAGCTGAGGAATACCACTATTCTTGCACAGAGTGCAATGCTATATTTGAAACTGTCGACGCGTGGACTGACCATCAGGTAGCCGAACATAACCAAGTGGCGCATCATTGCGACCAGTGTGAAAAGAAATTCTTACGGCCCTCTGAGCTCGCAGAGCACAAGAACACTCACTTGAGAGTCAAATTCTATCCTTGCAGTATATGCTCTAATTCATATAGCACCCCACAAAAGTTGTCCGACCATGTCCAAAACGTTCATCCTGGTGTAGCATCTCAGGTCAATCCAGAAAATGAATTTTTCTGTGAGATTTGTATTCGAGGTTTCAAAAGTCGTCAAGCGTACTCGAATCATATGCGCATCCATGCAAAAGTGCCGACCACCAATAGAAAGCCCGGTGAACCTAAAGGATTCGACCCACGTATAATCGGAAAACCCATAAAGCAATTCACAATATCCAATGTCCCACCTGGGTTCATTAATTTCAAGCCAAATGCGAATGTTCCTAATGCTCCTTATTCGTGTGATATTTGCGGCAAGGGCTTCATGCACAAGAAAAATATTTGGAAGCACAAAAAAGTATTGCATGCTGATATAATAAATGACAGAAATGACAGCGAAGAGAATACGATGCATGCCTCGACCGAAGAAGATGAATATAATGTTGATGAAAACGGCGCAATACTTTCAACGCCACAGTTCAACAGTTTCAATTTTACTAATTTTACAAATAATGCGGCGCAGGCTCAGGCAGATGCTATGCCGTTTTCATGTGAATTATGTTCCAAGAGATTCCCGCTCAGAACTAGTCTGTGGAAGCACAAACGCGCTAAGCACGGAATTACAAATGCTAATCCCGCTGGCAACATAGAAGCTCAATCACAAGTTGCTCAAAGCGAAAGCCAAGGTGGTGGTCGGTCGAGCTGTACTATTTGCAAAATATCGTTTGCAGACAAAAAATCTTACTATCGTCACAGAAAAAACGTTCACAAATCAGCGACACAAATGTGTAAGATTTGTGGCAAGCCCCTGAATTCCACTCAGGAACTGTACGAACATCTAAAAGCAGCTCACGCACGAGAGTTGCTCGGCTACAACGCCAACCAAAGTACGAGTAAAGTGCAGGATGTACCAACGGATATGGACGGCGAATTTGACAACGATCAAGATTCTGCAGACCCTAGTGTCGATTATCAAGCACGATATCCGTGCGACACTTGTGGCAAACAGTTTGTGGGATTACTGTCTTTGCAAAATCACCAGTGTATAAATCAAGTTCCTTCACAACCACAAACCTTCGATTGCGAGATCTGCCATAAAAGCTACACCTCCATCGCCGCATTGAAGAGTCATCGCGGCTGGCATCTCCGATCGCCCGATGGCAAGGCGGCTGCTAACAATAGCGGTCTTTGGATGCCTCAGCATAAGGTCACCAGCAAGGTCAGCAAACATGAAGTCGTAGAAGCGGGCACACCTTCGCCCTCGACGTCATCAGTTGTGACTCGACTCAATTCCACCCCTGCGGCCGTGGCCAAACGGAGATTACCGCCCGAAGTGGAAGTTACAGTTGTGAATCCGAACAAAAAGATGCGCTCAGACGATTCTGTTGAATTGGATCAGCAAAGCGATACCGCTGAAGGAAGATACTGTACCATATGCGACAAAGATTTCACGAAACGCGCCGCATATCAACGCCATATGGACGAGGTTCACCAGCCGAACTCTGTTTTCTGTCCTGTTTGTGATAAGAGTTTTACGAGAAAATCTACTCTGCTCGTGCACATGAAAAAGCATTACGAAGGTGGCGGAGAGGGTAGTTCCTCGACTGCCCAAGTGGATGATGATGAAGGCTTCTCGTGTGACCTCTGCGGTGCGCAGTACGACACTGAGAACGCTCTGCGGGCTCATCGAATCAGGCATCACGGGGAGGAGTCGGGGGATTCGGACGACGATGGTCAAGTGTCAATATCACAGCCGGGGGAATTCACGTGTGGTCAATGCGGTGACGGTGTTGCCACGGCGCGCGATCTGATCACTCATAGGGCTATACATTCTACTCCTACTAAGTTCTTCTGCAACATTTGCAAAGTGTATTTCGTGAGAGCATTGGATCTGTCTTCACACACGCGTGCGCGACACGCAGACAATGAGAAAGTGTTCTTCCCTTGTGCCATGTGTGATCGCTTCTATATGAACAAAAAGAGCTTGCAACGTCACATCGATATGGCTCACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRGELLAIFPTTSSDDMEPPILASKIKDCVSVEINENDDLPTNVCRKCVDNVNNWHLFKTVCAKTQNKLLSLTRKDGSLLEEVHIKSEPFDEAYDDGVVIDGSYPDAENSNFSSKLQPEGPPILASLGLTPRSDKKCVDPRMDWQRVHAILDIVEESNVIDSLQTVEESDILHHSDHESDTEAKLQPDLDSTFINCKNGYACRNKNILSKYPLKVGAETKNAIKLKKRAIKVQKYCGQAKSAWQLLFTDDILDTIVSSTNANILRHDNGFGKGTYVAEVKTLIGILYLNGIMRPTHQKCSDLWDKKCGVPSVINAMTHERFNFLLRNLCFYSQDDDDLMQFDTMRRIRQVFEIFALNCRTAFDVESTAVIDEIIVPVYGPCPFRYVIEKKPLKRGVKMVLLADPNNFYVSNLDVITDPLFSAEEIVKKITQHLSGTGKTIIMDSWYFSPRLLHTLKSYQLYTIAAVPPKSDEIPPLFLSEFRKNCTYISGFMDDEISLTSHVDSQSKVTNVLTNTPQFYRKSNMKHTSVSVYKKNQPTVQVLDVLMHYYTTMQHSNDWALSLFFTLLNIASVNAQVIWSSRNKSVTPRRSFIRDLGLSLMEDELLSAPLNTIGESVAQKSVRGLESEKDDDEEYEDEVKAPQPVKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKSHSRMQPKLRPNPFNPKARLMPNPISHKMQLLPKLMPKMIPQKIITPPKPIPIKSSKTAHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYDENQDEEGDAELHNNQSQTYDTVDMDSENEIEIARQQENVDENIGDNEENQDEDENNENDDENAGEEGDKVVENESEKDLSPQEANPGEEGNENMDVDVNYEAKDDEPNNEEEEEGNDEGENTPDASQTEDNEDDEDPPVGLAPEVELNEEMQNSNTFNSELNDDEDEPDESAEHNDTADVDPKALELESDKALVTSAQRDFIKRFRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDENGIIASDIVVEEPKGKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSAVPLGCVHCGASYKDKTLLKKHIRNGDCTVYIHCDLCSEQFTNMQDFNDHALFVHAEHFVKSETQSVDGRLTDCYLCGMKTSKYTDLLKHFKAAHDEAIHHCQFCGVKFEQAVDLNKHMCLEHPGQTPGSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQNVHPGVASQVNPENEFFCEICIRGFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTISNVPPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGAILSTPQFNSFNFTNFTNNAAQAQADAMPFSCELCSKRFPLRTSLWKHKRAKHGITNANPAGNIEAQSQVAQSESQGGGRSSCTICKISFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKVQDVPTDMDGEFDNDQDSADPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVEAGTPSPSTSSVVTRLNSTPAAVAKRRLPPEVEVTVVNPNKKMRSDDSVELDQQSDTAEGRYCTICDKDFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSSTAQVDDDEGFSCDLCGAQYDTENALRAHRIRHHGEESGDSDDDGQVSISQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663313;
- 90% Identity
- -
- 80% Identity
- -