Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751379.1:9713605-9722194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0049 0.33 12.1 1.5 3 23 648 669 647 669 0.96

2 24 5.2 3.5e+02 2.6 1.1 4 23 1026 1047 1024 1047 0.84

3 24 0.05 3.3 8.9 0.6 1 21 1052 1072 1052 1073 0.96

4 24 8.7 5.8e+02 1.9 0.4 1 23 1113 1136 1113 1136 0.90

5 24 0.001 0.07 14.2 0.9 3 21 1147 1165 1147 1166 0.96

6 24 0.34 23 6.3 0.6 2 23 1174 1196 1173 1196 0.93

7 24 0.021 1.4 10.1 0.7 3 23 1215 1236 1213 1236 0.92

8 24 0.0021 0.14 13.2 2.1 1 23 1241 1264 1241 1264 0.93

9 24 0.16 10 7.4 0.0 1 23 1290 1313 1290 1313 0.90

10 24 0.023 1.6 9.9 3.4 1 23 1318 1340 1318 1340 0.97

11 24 0.0028 0.19 12.8 0.2 1 23 1346 1369 1346 1369 0.98

12 24 0.0097 0.65 11.1 0.8 1 23 1382 1404 1382 1404 0.97

13 24 0.00022 0.015 16.3 1.8 1 23 1457 1480 1457 1480 0.97

14 24 0.0043 0.29 12.2 0.9 1 23 1539 1562 1539 1562 0.95

15 24 0.0025 0.17 13.0 1.5 2 23 1593 1615 1592 1615 0.95

16 24 0.44 30 5.9 0.1 2 23 1621 1643 1620 1643 0.92

17 24 0.0081 0.54 11.4 0.3 1 21 1687 1707 1687 1708 0.95

18 24 0.0015 0.1 13.7 0.6 1 23 1718 1740 1718 1740 0.93

19 24 0.00016 0.011 16.7 0.3 2 23 1833 1855 1833 1855 0.93

20 24 4.1e-07 2.8e-05 24.9 1.4 3 23 1862 1882 1861 1882 0.98

21 24 0.0066 0.44 11.7 0.4 1 23 1901 1923 1901 1924 0.95

22 24 0.42 29 6.0 0.0 1 23 1948 1970 1948 1970 0.97

23 24 0.033 2.2 9.5 0.7 1 23 1976 1999 1976 1999 0.95

24 24 0.00045 0.031 15.3 0.4 1 23 2007 2030 2007 2030 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0049	0.33	12.1	1.5	3	23	648	669	647	669	0.96
2	24	5.2	3.5e+02	2.6	1.1	4	23	1026	1047	1024	1047	0.84
3	24	0.05	3.3	8.9	0.6	1	21	1052	1072	1052	1073	0.96
4	24	8.7	5.8e+02	1.9	0.4	1	23	1113	1136	1113	1136	0.90
5	24	0.001	0.07	14.2	0.9	3	21	1147	1165	1147	1166	0.96
6	24	0.34	23	6.3	0.6	2	23	1174	1196	1173	1196	0.93
7	24	0.021	1.4	10.1	0.7	3	23	1215	1236	1213	1236	0.92
8	24	0.0021	0.14	13.2	2.1	1	23	1241	1264	1241	1264	0.93
9	24	0.16	10	7.4	0.0	1	23	1290	1313	1290	1313	0.90
10	24	0.023	1.6	9.9	3.4	1	23	1318	1340	1318	1340	0.97
11	24	0.0028	0.19	12.8	0.2	1	23	1346	1369	1346	1369	0.98
12	24	0.0097	0.65	11.1	0.8	1	23	1382	1404	1382	1404	0.97
13	24	0.00022	0.015	16.3	1.8	1	23	1457	1480	1457	1480	0.97
14	24	0.0043	0.29	12.2	0.9	1	23	1539	1562	1539	1562	0.95
15	24	0.0025	0.17	13.0	1.5	2	23	1593	1615	1592	1615	0.95
16	24	0.44	30	5.9	0.1	2	23	1621	1643	1620	1643	0.92
17	24	0.0081	0.54	11.4	0.3	1	21	1687	1707	1687	1708	0.95
18	24	0.0015	0.1	13.7	0.6	1	23	1718	1740	1718	1740	0.93
19	24	0.00016	0.011	16.7	0.3	2	23	1833	1855	1833	1855	0.93
20	24	4.1e-07	2.8e-05	24.9	1.4	3	23	1862	1882	1861	1882	0.98
21	24	0.0066	0.44	11.7	0.4	1	23	1901	1923	1901	1924	0.95
22	24	0.42	29	6.0	0.0	1	23	1948	1970	1948	1970	0.97
23	24	0.033	2.2	9.5	0.7	1	23	1976	1999	1976	1999	0.95
24	24	0.00045	0.031	15.3	0.4	1	23	2007	2030	2007	2030	0.96

Sequence Information

Coding Sequence: ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCCCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCACCCATCCTCGCTTCCAAAATAAAGGAATGCGTGTCTGTAGAGATAAACGAAAATGACGACCTGCCGACAAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACTGTATGTTCAAAGACACAAAACAAACTACTGTCTCTTACAAGAAAAGATGGAAGCCTACTAGAAGAGGTGCATATCAAAAGTGAACCATTTTCTGATGAGGCTTATGATGATGGAGTGATTATTGATGGCTCATACCCTGAAGCTGAGAATGCCAGCCTTTCAAGTAAGCTGCAGCCTGAAGGGCCCCCAATCCTGGCTTCACTGGGGCTCACACCGAGGAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCACCGAGTCCATGCAATATTGGATATGGTTCAAGACAGCAATGTCATTGATTCACTGCAAACTGTGGAGGAGAGTGATGTTATACACCACTCCGATCATGAGTCAGACACTGAAGCCGAGCTCCAGCCAGATCTAGATGATGTTTTCATACATTGTAAAAAAGGCTATGCttgtagaaataaaaatatattactcAAAAATCCACAAAAAGACACCTCCAGTGCCAAAGAGACTCTTAAACTGAAAAAAAGAAAAGCTGAATTTAATAAGCACTGCGGTAAACCTAGAAGTGCTTGGCAGTTGCTGTTCACAGATGATCTACTTGATGTTATTGTCTCATCAACAAATGAGAACATACTCAGGCTTGGCAAAGGCTTAGAAGGTTGCACCAATGTTGGTGAAATCAAAACTTTCATTGGAATTTTGTACTTGAACGGAATAATGAGACCAACTCATCAGAAATGTGGTGACCTCTGGAACGAGAAATGCGGAGTCCCAGCTGTTATAAACGCAATGAAAAACGAGCGATTTATATTTcttatacaaaatatttgtttttatagccAAAAAGATGACGATTGCATTATGCAGTTTGATACGATGAAACGTATTCGCAAAGTGTTCGAAATCTTTGCATTGAACTGCAGAACAACCTTCGACGTGGATAAAGTAGCTGTTGTTGATGAGATCATTGTGCCAGTTTATGGACCTTGCCCCTTTCGATACGATATCGAAAAGAAACCACTGAAGGGTGGCATAAAAATGGTATTACTGGTCGATCCAAACAATTTCTACGTCAGTAACATGGATGTTATTATGGATCCGTATTTCTCTGCTGAAGAAATTGTGAAAAATATCACTCAACATTTGTATGGGACTGGAAAAACTATCATAATGGATAGTTGGTACTTTTCTTACCCATTACTGAAGACATTGAAGAGTTACAAACTTTATACAATAGCGGCGTTGCACCCGAAGAGCGATGACATACCTTCTCTATTTCTATCGCACTACAGAAAAAGCTGCACATATATTTCTGGATTTCTTGACGATGAAGTTTCACTCACTTCTCATGTGAACTCACAGACAAAGGCAACGAATGTTGTTACAAATCTGCCACAGTTTTATCGGAAGGGTCATACTGAGCGCACCACATCTGTTTCGGCTTACAAGAAAAACCAATCGGCAGTTCAAGTCCTGGATGTCCTGATGCATTATTATACGACGTTGCAACACACAAACGATTGGACAATTTCATTGTTTTGTACCTTACTCAACATTGCTTCTGTCAATGCTCAGGGAGTGGAGAGTGAGAAAGACGAGGAAGAAGATTATGAGGAGGAGGTAAAAACCCCTAAACCGGTGAAGGTCCCTCATATGCCTGAAGTTTCCATCACCGTGATGCGACCTACGGGAGAGACGCTTCACGCCCGCCAAGGTATCCAACAGATAGCCTCAAAAGACTGCCTCATCTGCGGACGCTCTTATAGATACTCGCACAACGCAAGGCGTCACGAACTCACGTCACACAAATTCGACCGCTACACAAATAAGATAAACAACAAAAAGACACACTCTCACATGCAACCCAAACTCAGACCCAACCCTTTCAATCCGAAAGCGCGACTTATGCCCAATCCGATCAGCCATAAAATGCAGTTGTTACCTAAGATTATACCAAAAATGATCCCCCAAAAGATTATTACCCCACCTAAACCGATACCTATTAAATCATCAAAAATACCGCAGAATAACTTGCCATATCCGTTGCGTATCAAAGCTCTTAAAGATTTGcaaattaaaaagaaagaacCTCAGATTTTGAAGACATTACTCACATCGAAACCTGAAGTCTTGGTCTCAGAACCGGAGATTATGAACTCTGGTCCAGAAAGCCCCGAAACTCTGATATCTGAGCCAGAGATTGCTTCTTTCCAAGTGGAAGCTATTCTATCGGAACCCAACGATTACGATGAAAATCAAGAAGATGGTGACGTGGAAATGCATAACAATCAGAGCCAAAATTACGACACAGTAGATATGGACTCTGAAAATGAAATAGAAATTGCGCGTCAACAGGAAAATGTCGACGGTAACGACGAAAACCCCGAAGAAGATGACAATAATCAGCAAGATCACGGAAATCAATTCGATGAAGGCGACAAAGCTGGTGAAATTGAAAGTGAAAAAGATCTCAGTCCCCAAAATGCAGGCCTTGAGGAAGGCAACGGAAATATCGATCCTGAAGAAAATGACGAAGCCAAAGATGATGAACGTAATGATGAGGACGGAAATGAGGAAGGGGAAAATGAACTCGATGCCAGCCAAGTGGCTGAGGaaaatgatgacgatgatgaaccGCCGGTCGGACTAGCACCGGAAGTTGAGCTCAACGAAGATATGCATAATAACTCCAACACATTCACCAGCGAGATGAATGAAGACGAAGAGGAACCTGACGAAAGCGCAGAGATCAATGACACAGTCGACGGTGAACAGAAACCACTCGGCGCTCAGCCAACATACGTCACTAACGCTCAAAGAGATTTTATTAAAAGGTATCGTGACATAATCCTACAGATTAACACTAAGAGGTGTCTGTGTTGCGATAAAGAATATCCACGCAGAAAAGCTGTTATTCAACATCTTCAAAAGAATGGGCATAAAGTTCCAAAGCATACTTGCTACAACTGTGTTATAACTTTTACTCACATTGGCGCTCTGCTTAGTCATATGAGACAGAGCTCTTGCACCGATCTCTGGAAGATTATCCATGACGAGAATGGTATAACGAGTGAGATGGTCATTGAAGAACCCAAGAGCAAAATTCAAGCCAAAGATATTTTCAACGCTAAATCTTATGCTTGCAGATTATGCCCAGCTAAATTCCAGCTAAAACAATCTATTATGAAACATGTATCTGAATTCCACGAGGATGGCCAATCTTCGGTCCCTCTCGGGTGCGTTCATTGCGGAATCTCGTTCAAGGAAAAAACGTTGTTGAAGAAACATATCCGCAACGGCGATTGTACGGTGTACATCCATTGTGATCTTTGTTCTGAACAATTCACCAACATGCAAGATTTCAATGATCACGCTTTGTCCGCGCACGCTGAGCACTTCGTCAAAAGTGAAAATCAGAGCGTCGATGGACGACTCACAGATTGCTATCTTTGTGGGACGAAGACTACTAGCTACTCGAATCTGCTCAAACATTTCAAAGCGGCGCATGATGAAATCCCGCATCACTGCCAGTTCTGTGGCGTCAAGTTTGAGCAGCCTGTTGATCTAAACAAACACATGTACCTGGAGCATCCAGGACAAACTCCTGATATGCAAACTTCCGAACCAGACATGTCTTTGGTGAAAGAAGAAGCTGAGGAATACCACTATTCTTGCACAGAGTGCAATGCTATTTTCGAAACTGTCGATGCATGGACTGACCACCAGGTGGCGGAACATAATCAAGTGGCTCACCACTGTGACCAGTGCGAAAAGAAGTTTTTGCGGCCCTCAGAGCTAGCAGAGCACAAAAACACTCACTTGAGAGTCAAATTCTATCCATGCAGCATCTGCTCCAATTCATACAGCACTCCACAGAAACTGTCAGACCACGTCCAGACCGTACATCCTGGTGCAGCATCCCAGATTAATTCTGAGAATGAGTTTTTCTGCGAGATTTGTATTCGTGGCTTCAAAAGTCGCCAGGCTTACTCGAATCATATGCGTATTCATGCCAGAGTGCCAACGACTAACAGGAAACCTGCTGAACAACTTAAAGGATTTGATCCACGTATTATCGGGAAACCCATCAAGCAATTCACAATATCCAATGTTGTCCCACCTGGGTTCATCAACTTTAAGCCAAATGCTAACGTTCCTAACGCACCTTACTCATGTGATATTTGCGGCAAAGGTTTCATgcacaagaaaaatatttggaaGCACAAAAAAGTGCTGCATGCCGATATAATAAACGATAGAAACGATAGTGAGGAAAACACAATGCATGCCTCTACCGAAGAGGATGAGTATAATGTTGATGAAAATGGCTCATTACTGTCAACGCCACAATTTAACAGTTTTAATTTTACCAATTTCAATAATACAGTACAGCCTCAGGCAGATCCTATGCCTTTTGCATGCGAATTATGTTCTAAGCGATTCCCACTTAGAACCAGTCTCTGGAAGCACAAACGGGCTAAGCACGGAATTACGAATTCAAATGCGGGAAACAGCGGGCCTTCTCAAGCGACCAATGATGGCATGCCCAGCGAGAACACAGCCGGAAGTCGATCTAGCTGTACCATTTGTAAAATTACTTTTGCTGACAAAAAATCTTACTATCGCCACAGGAAGAACGTTCACAAATCAGCAACACAGATGTGCAAAATTTGTGGCAAGCCATGGAACTCTACTCAGGAACTGTACGAACATCTGAAAGCAGCTCACGCTAGAGAACTGCTAGGGTACAATGATAACCAAAGTACTAGTAAAGTGCAGGATACATCACAGGATATGGATGGCGATTTCGACAACGAACATGATAGTGGAGATCCTAGCGTTGAATATCAAGCACGATACCCGTGCGATACCTGTGGCAAACAGTTTGTTGGACTGCTCTCGTTGCAAAATCACCAGTGCATAAATCAAGTATCTACGCAACCACAGACTTTCGACTGTGAAATTTGCCACAAAAGCTATACTTCCATAGCCGCGTTAAAAAGTCATCGCGGCTGGCATCTCCGATCACCCGATGGCAAGGCGGCCGCCAACAATAGTGGGCTCTGGATGCCTCAGCACAAAGTAACCAGCAAGATCAGCAAACATGAGGTCATTGAACAGATCGCGCCAGCTGCCTCGACCTCATCAGTTGTAACTCGACTCAGTTCGAATCCGGCGGCTGCAGCTAAAAGAAGGCTTCCACCAGAAGTAGAGGTAACCGTCGTGAATCCCAATAAAAAGATGCGTTCCGATGATTCCGGCGAAACGGATCAGAACGACGGCTCCGAAGGAAGGTATTGCACCATATGCGACAAAGATTTTACGAAACGCGCAGCGTATCAACGTCACATGGAAGAGGTTCATCAGCCGAATTCCGTGTTTTGCCCGGTCTGTGATAAAAGTTTTACAAGAAAGTCCACTTTGCTTGTGCACATGAAAAAGCACTACGAAGGTGGCGAGGGTAGTTCCTCGACAGCGCAGGCCGACGACGATGAAGGCTTTTCCTGTGACCTCTGCGGTGCGCAGTACGATACTGAGAACGCATTGAGGGCACATCGAATCAGGCATCACGGAGAGGAATCAGGGgaagatgatgacgatgacgatgACGGTCAGGTGACGATGCCGCAGCCGGGCGAGTTCACTTGCGGTCAGTGCGGAGACGGCGTGGCTACGGCGCGTGATCTGATCACGCATCGTGCCATACATTCAACACCCACCAAATTCTTCTGCAACATTTGCAAAGTTTACTTCGTGAGAGCGTTGGATCTGTCCACACACACTCGAGCGCGACACGCGGACAATGATAAAGTGTTTTTTCCCTGCGCTATGTGTGATCGCTTCTACATGAATAAGAAGAGCTTGCAAAGGCACATTGACATGGCCCATTGA
Protein Sequence: MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILASKIKECVSVEINENDDLPTNVCRKCVDNVNNWHLFKTVCSKTQNKLLSLTRKDGSLLEEVHIKSEPFSDEAYDDGVIIDGSYPEAENASLSSKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDSNVIDSLQTVEESDVIHHSDHESDTEAELQPDLDDVFIHCKKGYACRNKNILLKNPQKDTSSAKETLKLKKRKAEFNKHCGKPRSAWQLLFTDDLLDVIVSSTNENILRLGKGLEGCTNVGEIKTFIGILYLNGIMRPTHQKCGDLWNEKCGVPAVINAMKNERFIFLIQNICFYSQKDDDCIMQFDTMKRIRKVFEIFALNCRTTFDVDKVAVVDEIIVPVYGPCPFRYDIEKKPLKGGIKMVLLVDPNNFYVSNMDVIMDPYFSAEEIVKNITQHLYGTGKTIIMDSWYFSYPLLKTLKSYKLYTIAALHPKSDDIPSLFLSHYRKSCTYISGFLDDEVSLTSHVNSQTKATNVVTNLPQFYRKGHTERTTSVSAYKKNQSAVQVLDVLMHYYTTLQHTNDWTISLFCTLLNIASVNAQGVESEKDEEEDYEEEVKTPKPVKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKTHSHMQPKLRPNPFNPKARLMPNPISHKMQLLPKIIPKMIPQKIITPPKPIPIKSSKIPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYDENQEDGDVEMHNNQSQNYDTVDMDSENEIEIARQQENVDGNDENPEEDDNNQQDHGNQFDEGDKAGEIESEKDLSPQNAGLEEGNGNIDPEENDEAKDDERNDEDGNEEGENELDASQVAEENDDDDEPPVGLAPEVELNEDMHNNSNTFTSEMNEDEEEPDESAEINDTVDGEQKPLGAQPTYVTNAQRDFIKRYRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRQSSCTDLWKIIHDENGITSEMVIEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPLGCVHCGISFKEKTLLKKHIRNGDCTVYIHCDLCSEQFTNMQDFNDHALSAHAEHFVKSENQSVDGRLTDCYLCGTKTTSYSNLLKHFKAAHDEIPHHCQFCGVKFEQPVDLNKHMYLEHPGQTPDMQTSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQTVHPGAASQINSENEFFCEICIRGFKSRQAYSNHMRIHARVPTTNRKPAEQLKGFDPRIIGKPIKQFTISNVVPPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGSLLSTPQFNSFNFTNFNNTVQPQADPMPFACELCSKRFPLRTSLWKHKRAKHGITNSNAGNSGPSQATNDGMPSENTAGSRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPWNSTQELYEHLKAAHARELLGYNDNQSTSKVQDTSQDMDGDFDNEHDSGDPSVEYQARYPCDTCGKQFVGLLSLQNHQCINQVSTQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIEQIAPAASTSSVVTRLSSNPAAAAKRRLPPEVEVTVVNPNKKMRSDDSGETDQNDGSEGRYCTICDKDFTKRAAYQRHMEEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSTAQADDDEGFSCDLCGAQYDTENALRAHRIRHHGEESGEDDDDDDDGQVTMPQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSTHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIDMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663313;
90% Identity: iTF_00267412;
80% Identity: -