Etri004694.1
Basic Information
- Insect
- Epirrhoe tristata
- Gene Symbol
- -
- Assembly
- GCA_951394285.1
- Location
- OX596140.1:3785563-3794008[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0046 0.31 12.1 1.5 3 23 648 669 647 669 0.96 2 24 4.8 3.2e+02 2.6 1.1 4 23 1032 1053 1030 1053 0.84 3 24 0.046 3.1 8.9 0.6 1 21 1058 1078 1058 1079 0.96 4 24 8 5.4e+02 1.8 0.4 1 23 1119 1142 1119 1142 0.90 5 24 0.00042 0.028 15.3 0.8 3 21 1153 1171 1153 1172 0.96 6 24 0.32 21 6.3 0.6 2 23 1180 1202 1179 1202 0.93 7 24 0.02 1.3 10.1 0.7 3 23 1221 1242 1219 1242 0.92 8 24 0.002 0.13 13.2 2.1 1 23 1247 1270 1247 1270 0.93 9 24 0.14 9.6 7.3 0.0 1 23 1296 1319 1296 1319 0.90 10 24 0.021 1.4 9.9 3.4 1 23 1324 1346 1324 1346 0.97 11 24 0.01 0.68 11.0 0.2 1 23 1352 1375 1352 1375 0.95 12 24 0.0089 0.6 11.1 0.8 1 23 1388 1410 1388 1410 0.97 13 24 0.0002 0.014 16.3 1.8 1 23 1463 1486 1463 1486 0.97 14 24 0.004 0.27 12.2 0.9 1 23 1545 1568 1545 1568 0.95 15 24 0.0023 0.16 13.0 1.5 2 23 1599 1621 1598 1621 0.95 16 24 0.41 27 5.9 0.1 2 23 1627 1649 1626 1649 0.92 17 24 0.0075 0.5 11.4 0.3 1 21 1693 1713 1693 1714 0.95 18 24 0.0014 0.094 13.7 0.6 1 23 1724 1746 1724 1746 0.93 19 24 0.00015 0.01 16.7 0.3 2 23 1839 1861 1839 1861 0.93 20 24 3.8e-07 2.5e-05 24.9 1.4 3 23 1868 1888 1867 1888 0.98 21 24 0.0061 0.41 11.7 0.4 1 23 1907 1929 1907 1930 0.95 22 24 0.39 26 6.0 0.0 1 23 1954 1976 1954 1976 0.97 23 24 0.03 2 9.5 0.7 1 23 1982 2005 1982 2005 0.95 24 24 0.00042 0.028 15.3 0.4 1 23 2013 2036 2013 2036 0.96
Sequence Information
- Coding Sequence
- atgaCTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCCCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCACCCATCCTCGCTTCCAAAATAAAGGAATGCGTGTCTGTAGAGATAAACGAAAATGACGACCTGCCGACAAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACTGTATGTTCAAAGACACAAAACAAACTACTGTCTCTCACAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCATATCAAAAGTGAACCATTTTCTGATGAGGCTTATGATGATGGAGTGACTATTGATGGCTCATACCCTGAAGCAGAGAATGCCAGCCTTTCAAGTAAGCTGCAGCCTGAAGGGCCTCCAATCCTGGCTTCATTGGGGCTCACACCAAGGAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCACCGAGTCCATGCAATATTGGATATGGTTCAAGACAGCAATGTCATTGATTCACTGCAAACTGTGGAGGAGAGTGATGTTATACACCACTCCGATCATGAGTCAGAGACTGAAGCTGAGCTCCAACCAGATCTTAATGATACTTTCATTCATTGTAAAAAAGGCTATGCTTGcagaaataaaagtatattaCTCAAAAATCCACAAAAAGACACCTCTTGTGCCAAAGAGTCCTTGAAACTGAAAAAAAGAAAGGCTGAATTTGATAAACACTGCGGTAAACCTAGAAGTGCTTGGCAGTTGCTGTTCACAGATGATCTACTTGATGTTATTGTCTCATCGACAAATGAAAACATACTCAGACTTGGGAAAGGCTTAGAAGGTTGCACCAATGTTGGTGAAATCAAAACTTTAATTGGAATTTTATACTTGAACGGAATAATGAGACCAACTCATCAGAAATGTGATGACCTCTGGAATGAGAAATGCGGAGTCCCAGCTGTTATAAACGCAATGACCAACGAGCGTTTCATATTtctcatacaaaatatttgtttttatagcaAAAAAGATGACGATTGTATAATGCAGTTTGATACCATGAAACGTATTCGCAAAGTGTTCGAAATCTTTGCATTGAACTGCAGAACAACCTTCGACGTGGATAAAGTAGCTGTCGTTGATGAGATCATTGTGCCAGTTTACGGACCTTGCCCGTTTCGATACGATATCGAAAAGAAACCACTGAAACGTGGCATAAAAATGGTATTACTGGTCGATCCGAATAATTTCTATGTCAGTAACATGGATGTTATAATGGATCCGTATTTTTCTGCTGAAGAAATTGTGAAAAGTATCACTCAACATCTGTATGGGACTGGAAAAACTATCATAATGGATAGTTGGTACTTTTCTTACCCATTACTGAACACATTGAAGAGTTACAAACTTTATACAATAGCAGCGTTGCACCCGAAGAGCGATGACATACCTCCTCTATTTCTATCGCACTATAGAAAAAGCTGCACATATATTTCTGGATTTCTTGACAATGAAGTTTCACTCACTTCTCATGTGAACTCACAGACAAAAGCAACAAATATTGTTACAAACCTGTCTCAGTTTTATCGCAAAGGTCATACTGAGCGCACCACATCTGTGTCAGCTTACAAGAAAAACCAATCGGCAGTTCAAGTCCTGGATGTTCTGATGCATTATTATACGACATTGCAACACACAAACGATTGGACAATTTCATTGTTTTGCACTTTACTCAACATTGCTTCGGTTAATGCTCAGGGAGTGGAGAGTGAGAAAGACGAGGAAGAAGAATATGAGGAGGAGGTTAAAACCCCTCAGCCGGTGAAGGTTCCTCATATGCCTGAAGTTTCCATCACGGTGATGCGACCCACGGGGGAGACGCTTCACGCCCGCCAAGGTATCCAACAGATTGCCTCAAAAGACTGCCTCATCTGCGGACGCTCCTATAGATACTCACACAACGCAAGGCGTCACGAACTCACGTCACACAAATTCGATCGCTACACAAATAAGATAAACAACAAAAAGACACACTCTCACATGCAACCCAAACTCAGACCCAACCCCTTCAATCCGAAAGCCCGACTTATGCCCAATCCGATCAGCCATAAAATGCAGTTATTACCTAAGATTATACCAAAAATGATCCCTCAAAAGATTATTACCCCACCTAAACCGATACCTATTAAATCGTCTAAAACACCGCAGAATAACTTGCCATATCCGTTGCGTATCAAAGCTCTCAAAGATTTGCAAATTAAAAAGAAGGAACCTCAGATTTTGAAGACATTACTCACATCGAAACCCGAAGTCTTGGTCTCAGAACCGGAGATTATGAACTCAGGTCCAGAAAGCCCCGAAACCCTGATCTCTGAGCCGGAGATTGCTTCTTTCCAAGTTGAAGCTATTCTTTCGGAACCCAACGATTACGATGAAAATCAAGAAGATGGTGACGTTGAAATGCATAACAATCAGAGCCAGAATTACGATACAGTCGATATGGACTCTGAAAATGAGATAGAAATTGCACGGCAACAGGAAAATGTCGACGATAACGACGACAACCCTGAAGAAGATGATAATAATCAGCAAGATGACGGAAATCAATTCGATGAAGGCGACAAAGCTGGTGAAGTTGAAAGCGAAAAAGATCTCAGTCCCCAAAATGCAGGCCTCGATGAGGAAGGCAACGGAAATATGGATCCTGAAGAAAATGATGAAGCCAAAGATGATGAACGTAATGACGAGGACGAAAATGAGGAAGGGGAAAATGAACTCGATGCCAGCCAAGGGGCTGAGGAAAACGATGAAGATGATGAACCGCCGGTCGGACTAGCGCCGGAAGTTGAGCTCAACGAAGACATGCATCTCAACGAAGATATGCATAACTCCAACACATTCACCAGCGAGTTGAATGAAGACGAAGAGGAACCTGATGAAAGCGCAGAGATCAATGATGCAGTCGACGGTGAACAGAAACCACTCGGCGCTGAGCCAACATACGTCACCAATGCTCAAagagattttattaaaaggtACCGTGACATCATCCTGCAAATTAACACTAAGAGGTGTCTGTGTTGCGATAAAGAATATCCACGCAGAAAAGCTGTTATtcaacatcttcaaaagaatGGGCATAAAGTTCCCAAGCATACATGCTACAACTGTGTTATTACGTTTACTCACATTGGCGCTCTGCTTAGCCACATGAGACAGAGCTCTTGCACCGATCTGTGGAAGATAATCCATGACGAGAACGGTATAACTAGTGAAATGGTTGTTGAAGAACCCAAAAGCAAAATTCAAGCCAAAGACATTTTCAACGCTAAATCTTATGCATGCAGGTTATGCCCAGCTAAATTCCAGTTAAAACAATCTATCATGAAACATGTTTCTGAGTTCCACGAAGATGGACAATCTTCGGTCCCTCTCGGGTGTGTTCATTGCGGAGCCTCGTTCAAGGAAAAATCGTTGTTGAAGAAACACATCCGCAACGGCGATTGTACGGTCTACATCCATTGTGATCTTTGTTCTGAACAGTTCACTAACATGCAAGATTTCAATGATCACGCTTTGTCCGCGCACGCGGAACACTTCGTCAAAAGTGAAAATCAGAGCGTCGATGGACGACTCACAGATTGCTATCTTTGTGGGACGAAGACTACTAGCTACTCCAATCTGCTCAAACATTTCAAAGCGGCGCATGACGAAATCCCGCATCACTGCCAGTTCTGTGGCGTCAAGTTTGAGCAGCCTGTTGATCTAAACAAGCACATGTACCTGGAGCATCCAGGACAAACTCCTGACATGCAAACGTCTGAACCAGACATGTCTTTGGTGAAAGAGGAAGCTGAGGAATACCACTATTCTTGCACAGAGTGCAATGCTATTTTCGAAACCGTCGATGCATGGACTGACCACCAGGTGGCGGAACATAATCAAGTGGCTCACCACTGTGACCAGTGCGAAAAGAAGTTTTTACGGCCCTCAGAGCTAGCAGAACACAAGAACACTCACTTGAGAGTCAAATTCTATCCATGCAGTATTTGCTCCAATTCATACAGCACTCCACAGAAACTATCAGACCACGTCCAGAACGTACATCCTGGTGCAGCATCCCAGATCAATTCTGAGAATGAATTTTTCTGCGAGATTTGTATTCGTGGCTTTAAAAGTCGCCAGGCTTACTCGAATCATATGCGCATCCATGCCAAAGTGCCAACCACTAACAGGAAACCTGCCGAACAACTAAAAGGATTTGATCCACGCATCATCGGGAAACCCATCAAGCAATTCACTATATCCAATGTTGTCCCACCTGGGTTCATCAACTTTAAGCCAAATGCTAACGTTCCTAACGCACCTTATTCATGTGATATTTGTGGCAAAGGTTTCATGcacaagaaaaatatttggaagCACAAAAAAGTGCTGCATGCCGACATAATAAACGATAGAAACGATAGTGAGGAAAACACAATGCATGCCTCTACCGAAGAGGATGAGTATAATGTTGATGAAAATGGATCATTACTGTCAACGCCACAATTtaacagttttaattttaccaATTTCAATAATACAGTACAGCCTCAGGCAGATCCTATGCCTTTTGCATGCGAATTATGTTCTAAACGATTCCCACTTAGAACCAGTCTCTGGAAGCACAAACGGGCTAAGCACGGAATTACGAACCCAAATGCGGGAAACAGCGGGGCTTCTCAAGCGACCAATGATGGCACGCCCGGCGAGAACCCAGCGGGAAGTCGATCGAGCTGTACCATttgtaaaattacttttgCAGACAAAAAATCTTACTATCGCCACAGGAAGAATGTTCACAAATCAGCAACACAGATGTGCAAGATCTGTGGCAAGCCATGGAACTCCACTCAGGAACTGTACGAACATCTGAAAGCAGCTCACGCTCGAGAACTATTAGGGTACAATGATAACCAAAGTACGAGTAAAGTGCAGGATGCATCACAGGATATGGATGGCGATTTCGACAACGAACATGATAGTGGAGATCCTAGCGTCGAATATCAAGCACGGTACCCGTGTGATACCTGTGGCAAACAGTTCGTTGGACTGCTCTCGTTGCAAAATCACCAGTGCATAAACCAAGTACCTACGCAACCACAGACTTTCGACTGTGAGATTTGTCACAAAAGCTATACCTCCATAGCCGCGTTGAAAAGTCATCGCGGCTGGCATCTCCGATCGCCCGATGGCAAGGCGGCCGCCAACAATAGTGGGCTCTGGATGCCTCAGCACAAGGTAACCAGCAAGGTCAGCAAACATGAGGTCGTTGAACCGATCGCGCCTGCTGCCTCGACCTCATCAGTTGTAACTCGACTCAGTTCGAATCCGGCGGCTGCAGCTAAAAGGCGGCTTCCACCAGAAGTGGAGGTAACCGTCGTGAATCCCAATAAAAAGATGCGTTCCGATGATTCCGGCGAAACGGATCAGAACGACGGCTCCGAAGGAAGGTATTGCACAATATGCGACAAAGATTTCACGAAACGCGCAGCGTATCAACGCCACATGGAAGAGGTCCATCAGCCGAATTCCGTGTTTTGCCCGGtctgtgataagagttttacAAGGAAGTCCACTCTGCTTGTGCACATGAAAAAGCACTACGAAGGTGGCGAGGGTAGTTCATCGACAGCGCAGGTGGACGACGATGAAGGCTTTTCCTGTGACCTCTGCGGCGCGCAGTACGATACTGAGAACGCATTGAGGGCTCATCGAATCAGGCATCACGGGGAGGAATCGGGGGaagatgatgacgatgatgatgacggTCAGGTGACGATGCCACAGCCGGGAGAGTTCACTTGCGGTCAATGCGGAGACGGCGTGGCCACGGCGCGTGATCTGATCACGCATCGCGCCATACATTCAACACCTACTAAATTCTTCTGCAACATTTGCAAAGTGTACTTCGTGAGAGCGTTGGATCTGTCTACGCACACTCGAGCGCGACACGCAGACAATGATAAAGTGTTTTTTCCCTGCGCCATGTGTGATCGCTTCTACATGAATAAGAAGAGCTTGCAAAGACATATTGATATGGCCCACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILASKIKECVSVEINENDDLPTNVCRKCVDNVNNWHLFKTVCSKTQNKLLSLTRKDGSLLEEVHIKSEPFSDEAYDDGVTIDGSYPEAENASLSSKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDSNVIDSLQTVEESDVIHHSDHESETEAELQPDLNDTFIHCKKGYACRNKSILLKNPQKDTSCAKESLKLKKRKAEFDKHCGKPRSAWQLLFTDDLLDVIVSSTNENILRLGKGLEGCTNVGEIKTLIGILYLNGIMRPTHQKCDDLWNEKCGVPAVINAMTNERFIFLIQNICFYSKKDDDCIMQFDTMKRIRKVFEIFALNCRTTFDVDKVAVVDEIIVPVYGPCPFRYDIEKKPLKRGIKMVLLVDPNNFYVSNMDVIMDPYFSAEEIVKSITQHLYGTGKTIIMDSWYFSYPLLNTLKSYKLYTIAALHPKSDDIPPLFLSHYRKSCTYISGFLDNEVSLTSHVNSQTKATNIVTNLSQFYRKGHTERTTSVSAYKKNQSAVQVLDVLMHYYTTLQHTNDWTISLFCTLLNIASVNAQGVESEKDEEEEYEEEVKTPQPVKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKTHSHMQPKLRPNPFNPKARLMPNPISHKMQLLPKIIPKMIPQKIITPPKPIPIKSSKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYDENQEDGDVEMHNNQSQNYDTVDMDSENEIEIARQQENVDDNDDNPEEDDNNQQDDGNQFDEGDKAGEVESEKDLSPQNAGLDEEGNGNMDPEENDEAKDDERNDEDENEEGENELDASQGAEENDEDDEPPVGLAPEVELNEDMHLNEDMHNSNTFTSELNEDEEEPDESAEINDAVDGEQKPLGAEPTYVTNAQRDFIKRYRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRQSSCTDLWKIIHDENGITSEMVVEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPLGCVHCGASFKEKSLLKKHIRNGDCTVYIHCDLCSEQFTNMQDFNDHALSAHAEHFVKSENQSVDGRLTDCYLCGTKTTSYSNLLKHFKAAHDEIPHHCQFCGVKFEQPVDLNKHMYLEHPGQTPDMQTSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQNVHPGAASQINSENEFFCEICIRGFKSRQAYSNHMRIHAKVPTTNRKPAEQLKGFDPRIIGKPIKQFTISNVVPPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGSLLSTPQFNSFNFTNFNNTVQPQADPMPFACELCSKRFPLRTSLWKHKRAKHGITNPNAGNSGASQATNDGTPGENPAGSRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPWNSTQELYEHLKAAHARELLGYNDNQSTSKVQDASQDMDGDFDNEHDSGDPSVEYQARYPCDTCGKQFVGLLSLQNHQCINQVPTQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVEPIAPAASTSSVVTRLSSNPAAAAKRRLPPEVEVTVVNPNKKMRSDDSGETDQNDGSEGRYCTICDKDFTKRAAYQRHMEEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSTAQVDDDEGFSCDLCGAQYDTENALRAHRIRHHGEESGEDDDDDDDGQVTMPQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSTHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663313;
- 90% Identity
- iTF_00267412;
- 80% Identity
- -