Basic Information

Insect: Cosmorhoe ocellata
Gene Symbol: -
Assembly: GCA_963675405.1
Location: OY776248.1:8457618-8466476[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0055 0.38 12.0 1.5 3 23 738 759 737 759 0.96

2 24 5.7 4e+02 2.5 1.1 4 23 1122 1143 1120 1143 0.84

3 24 0.09 6.3 8.2 0.6 1 21 1148 1168 1148 1169 0.96

4 24 9.7 6.7e+02 1.8 0.4 1 23 1209 1232 1209 1232 0.90

5 24 0.00056 0.039 15.1 0.3 3 21 1243 1261 1241 1262 0.94

6 24 2.4 1.6e+02 3.7 0.7 2 23 1270 1292 1269 1292 0.88

7 24 0.59 41 5.6 1.0 3 23 1311 1332 1309 1332 0.92

8 24 0.00093 0.064 14.4 2.6 1 23 1337 1360 1337 1360 0.96

9 24 0.17 12 7.3 0.0 1 23 1386 1409 1386 1409 0.90

10 24 0.026 1.8 9.9 3.4 1 23 1414 1436 1414 1436 0.97

11 24 0.012 0.84 10.9 0.2 1 23 1442 1465 1442 1465 0.95

12 24 0.011 0.74 11.1 0.8 1 23 1478 1500 1478 1500 0.97

13 24 0.00024 0.017 16.3 1.8 1 23 1552 1575 1552 1575 0.97

14 24 0.0034 0.24 12.6 1.4 1 23 1635 1658 1635 1658 0.96

15 24 0.0013 0.089 14.0 2.0 2 23 1687 1709 1686 1709 0.95

16 24 0.027 1.9 9.8 0.1 2 23 1715 1737 1714 1737 0.94

17 24 0.009 0.62 11.3 0.3 1 21 1781 1801 1781 1802 0.95

18 24 0.0017 0.12 13.6 0.6 1 23 1812 1834 1812 1834 0.93

19 24 0.00025 0.017 16.2 0.3 2 23 1928 1950 1928 1950 0.93

20 24 4.6e-07 3.2e-05 24.8 1.4 3 23 1957 1977 1956 1977 0.98

21 24 0.0073 0.51 11.6 0.4 1 23 1997 2019 1997 2020 0.95

22 24 0.47 33 5.9 0.0 1 23 2041 2063 2041 2063 0.97

23 24 0.04 2.8 9.3 0.6 1 23 2069 2092 2069 2092 0.95

24 24 0.00051 0.035 15.3 0.4 1 23 2100 2123 2100 2123 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0055	0.38	12.0	1.5	3	23	738	759	737	759	0.96
2	24	5.7	4e+02	2.5	1.1	4	23	1122	1143	1120	1143	0.84
3	24	0.09	6.3	8.2	0.6	1	21	1148	1168	1148	1169	0.96
4	24	9.7	6.7e+02	1.8	0.4	1	23	1209	1232	1209	1232	0.90
5	24	0.00056	0.039	15.1	0.3	3	21	1243	1261	1241	1262	0.94
6	24	2.4	1.6e+02	3.7	0.7	2	23	1270	1292	1269	1292	0.88
7	24	0.59	41	5.6	1.0	3	23	1311	1332	1309	1332	0.92
8	24	0.00093	0.064	14.4	2.6	1	23	1337	1360	1337	1360	0.96
9	24	0.17	12	7.3	0.0	1	23	1386	1409	1386	1409	0.90
10	24	0.026	1.8	9.9	3.4	1	23	1414	1436	1414	1436	0.97
11	24	0.012	0.84	10.9	0.2	1	23	1442	1465	1442	1465	0.95
12	24	0.011	0.74	11.1	0.8	1	23	1478	1500	1478	1500	0.97
13	24	0.00024	0.017	16.3	1.8	1	23	1552	1575	1552	1575	0.97
14	24	0.0034	0.24	12.6	1.4	1	23	1635	1658	1635	1658	0.96
15	24	0.0013	0.089	14.0	2.0	2	23	1687	1709	1686	1709	0.95
16	24	0.027	1.9	9.8	0.1	2	23	1715	1737	1714	1737	0.94
17	24	0.009	0.62	11.3	0.3	1	21	1781	1801	1781	1802	0.95
18	24	0.0017	0.12	13.6	0.6	1	23	1812	1834	1812	1834	0.93
19	24	0.00025	0.017	16.2	0.3	2	23	1928	1950	1928	1950	0.93
20	24	4.6e-07	3.2e-05	24.8	1.4	3	23	1957	1977	1956	1977	0.98
21	24	0.0073	0.51	11.6	0.4	1	23	1997	2019	1997	2020	0.95
22	24	0.47	33	5.9	0.0	1	23	2041	2063	2041	2063	0.97
23	24	0.04	2.8	9.3	0.6	1	23	2069	2092	2069	2092	0.95
24	24	0.00051	0.035	15.3	0.4	1	23	2100	2123	2100	2123	0.96

Sequence Information

Coding Sequence: ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCTCCCATCCTCGCTTCGAAAATAAAGGATTGTGTGTCTGTAGAGATAAACGAAAATGACGATCTGCCGACGAACGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTTAAGACTGTATGTGAAAAGGCACAAAACAAACTACTGTCTATCACAAGAAAGGATGGAAGCCTACTAGAAGAGATGCACATCAAAAGTGAGCCTTTCTTTGATGAAGCTTATGATGATGGAGTGGTTATTGATGGCTCATACCCAGAACTTGAGaATGCCAGCTTATCAAATAAACTGCAGCCGGAAGGTCCTCCGATTCTGGCATCATTGGGACTTACACCAAGGAGTGATAAGAAATGTGTGGATCCTCGAATGGATTGGCACCGAGTTCATGCAATATTGGATTTAGTTCAAGAGAGTGATGCCATAGATTCGCTGCAAACCATTGAAGAGAGTGATATTTTACACCACTCCGATCACGATTCAGATACAGAGGCCGAACTCCAACCAGACCTagatgatatttttattgattgtgAAAATGGCTATGCTtgtagaaataaaaacaatttttccaAAGATCCTCTTAAAGTCAGGTCCGGAACCAAAAGTGATATAAAACCGAAAAAACGGTCATTAAAGGCTCATAAGAATTGCGGTAAACCCAGGAGCGCTTGGCAGTTATTGTTTACAGATGATATACTCGATCTCATTGTCTCTTCAACAAATGCGAATATCCTGAGTCTTGGCAAGGGTTTAGAAAGGAGCACCCATGTCGCTGAAATCAAGTCTCTATTCGGAATTTTGTATTTGAACGGTATAATGAGGCCAACTCATCAGAAATGCAGTGACCTCTGGGACAAGAAATGTGGCGTCCCGTCCGTTATAAGCGCAATGACTAACCAACGATTCAATTTTCTTTTACAAAACCTCCGCTTCTATAACCACAATGATGACAGCAGCATGATGCAGTTCGATACTATGAAACGTATTCGCAAAGTGTTCGAAATCTTTGCGTTGAACTGCCGAACAACATTCGATATTGAGAGTACCGCCGTTATCGATGAGATCATCGTACCGGTTTACGGACCCTGCCCGTTCAGATACAACATCGAAAAGAAACCACTGAAACATGGTATGAAATTGGTGTTGCTAGTTGATCCGAACAATTTCTATGTAAGCAATTTGGACGTGATCACCGATCCGTATTTCGGAGCTGACgagattgtaaaaaaaatgactcAACATCTATTCGGCACTGGCAAGACAATCATGATGGATAGCTGGTACTATTCACCTCAGTTGCTGCATATGCTGAAGATGTATCATCTTTATACAATAGCCGCGGTGAATCCGAAGAGTGATGAGATACCACCACTGTTTCTCTCGCAGTACAGAAAAAACTGTACGTACATCACTGGTTTCGTGGACGAAGAGATTTCGCTGGTGTCACACGTGAACTCTCAGTCAAAAGCGACGAACATTATCACGAACATGCCTCAGTTTTATCGCAAAGGCACCAAAAAACGCACTACATCGGTGTCAGCTTATAAGAAGAATCAACCGGCAGTGCAAGTGTTGGACGTCCTTATGAATTATTATACGACGATGCAGCATACAAATGATTGGACGCTCTCATTGCTTTTTACATTACTGAATATTGCTTCGGTGAATGCTCAAGTTATATGGAGCACCCGAAATAATTGTGTCACTGCAAGGCGTTCGTTTATCAGAGATTTGGGACTAGGTCTGTTGGAAGATGAATTGCTACTGGTTATTGATACCATTCGCGAACCAGAGGCTAAAAGTTATATTGGACTTGTATCAGGGCCGAGGTACTACAAATGTAGGCGAAGGTGTAAGATCTGTATTCGTTCTAGCCCTAAAAGAGACAGACGGACCAAGCAGTACTGCGTCAAGTGTGAAGAGTTCATTTGTAGAGAGCATTCTGGAGTGGAAAGCGAGAAGGATGAAGAAGATGAATACGAAGATGAAGTAAAAGCCCCTCAACCGGTGAAGGTACCGCACATGCCTGAGGTTTCCATCACCGTGATGCGGCCGACCGGAGAGACGCTGCACGCGCGCCAAGGTATCCAACAGATCGCATCTAAGGACTGCCTCATCTGTGGACGCTCCTACAGATACTCACACAACGCGAGGCGACACGAACTCACATCACACAAATTCGATCGCTACaccaacaaaataaacaacaaaaaatcaCACTCGCGAATGCAACCTAAACTCAGGCCCAACCCTTTCAACCCGAAAGCGCGACTCATGCCCAATCCGATCAGCCATAAAATGCAATTAATACCCAAACTCATGCCAAAAATGATGGCGCAAAAAATTATTACCCCACCTAAACCAATACCTATCAAGTCATCAAAAACATCACATAATAATTTACCGTATCCGCTGCGAATAAAAGCCCTCAAAgatttgcaaataaaaaaaaaggaacCGCAGATTTTGAAAACATTACTCACATCTAAGCCAGAAGTACTGGTGTCGGAACCGGAGATCATGAACTCGGGCCCCGAAAGTCCTGAAACTCTAATATCCGAACCTGAAATTGCGTCATTCCAAGTTGAAGCGATACTGGATGAACCTAACGACTATGATGAAAACCAAGATGAAGCAGGAGACGCAGAAATGCATAATAATCAGAGTCAAAATTATGACACCGTTGATATGGACTCTGAAAATGAAATAGAAATTGCGCGACAGCAAGAAAACCCCGATGAGAATGTCGACGACAACGAGGAAAATCAtgatgaagaagaaaacaatCAGAACGATGACGATGTCGGCGAAGAAGGTGATAAAGTGGTAGAAAATGAAAGTGAAAAAGACCTCAGTCCCCAAGGAGCAAGTCTCGGTGATGACGGTAATGATAATATAGATGATGACGTAAATGACGAAAGCAAAGACGGTGAACGTAATAATGAAGAGGAAGATGAAGGAAATGATGAAGCTGAGAATGAGCTTGATGCTAGTCAGACCGAAGAAAATGACGACGATGAAGATCCGCCGGTCGGACTAGCGCCGGAAGTCGAGCTGAACGAAGACATGCACAACTCCAACACGTTCAATAGCGAGCTGAACGACGATGAAGAAGAACCAGACGAAAGTGCCGATCTCAATGATACTCCAGACCTTGAACCCAAAGCACTCGATGCTGATAAAACGTTAGTCACCACCGCACAAAAAGACTTCATAAAAAGGTTTCGCGATATAATCCTACAGATCAACACAAAGAGGTGCCTGTGTTGCGATAAAGAGTATCCTCGCAGAAAAGCTGTTATTCAACATCTGCAGAAAAATGGACACAAAGTACCGAAACACACTTGCTACAATTGTGTTGTTACTTTTACCCACATCGGAGCGCTACTCAGTCACATGAGACAAAACTCTTGCACGGATCTATGGAAAATTATTTACGACGATAACGGTATCACGGCTGACATGGTCGTCGAGGAACCCAAGGGCAAAATTCAAGCCAAAGATATTTTCAATGCTAAATCTTACGCATGTAGATTGTGTCCTGCTAAATTCCAGCTAAAACAATCTATTATGAAGCATGTTTCAGAGTTTCACGAAGATGGTCAGTCCGCAGTTCCTCTCGCTTGCGTCCACTGTGGAGCCTCTTACAAAGACAAAACTTTGCTCAAAAAACATATCCGGAACGGCGATTGTACGGTTTACATACATTGTGACTTATGTTCTGAACAATTTAACAACATGCAAGACTTCAACGACCACGCATTGTTCGTACACACTGAGCACTTTGTCAAGACTGAAACTCAAAGCGTTGATGGACGACTCACAGATTGCTATCTTTGTGGAACGAAGACGAGCAAATATACGGATCTGCTTAAACATTTCAAAGCTATGCACGATGAACACATACATAACTGCCAGTTTTGTGGTGTTAAGTTTGAGCAAGCCGTCGATCTTAATAAACACATGTGCATGGAGCACCCTGGCCAAACTCCTGGTATGCACGGCACAGAACCGGACATGTCCCTCGTCAAAGAAGAAGCTGAGGAGTATCACTATTCTTGCACTGAGTGTAATGCTATTTTCGAAACTGTAGACGCGTGGACTGACCACCAAGTAGCCGAACATAACCAAGTCGCGCATCATTGCGACCAGTGTGAAAAGAAATTCTTGCGACCCTCCGAGCTCGCAGAACACAAAAACACGCACTTGAGAGTCAAATTCTATCCTTGCAGCATATGCTCAAATTCATACAGCACTCCTCAAAAGTTGTCCGATCATGTCCAAAACGTTCATCCTGGAGCGGCATCTCAGGTCAATCCAGAAAATGAATTTTTCTGTGAGATTTGCATTCGAGGTTTCAAAAGCCGACAAGCGTACTCGAACCACATGCGTATTCATGCAAAAGTCCCGACCACCAATAGAAAGCCTGGTGAACCTAAAGGATTCGACCCTCGCATCATTGGAAAACCCATCAAACAATTCACAATATCGAATGCGGTCCCTCCTGGTTTCATTAACTTCAAGCCAAATGCAAATGTTCCTAATGCTCCTTATTCGTGTGATATTTGCGGTAAAGGTTTCATGCACAAGAAAAATATTTGGAAACACAAGAAAGTTTTGCATGCTGACATAATAAACGATAGAAATGATAGTGAAGAGAACACGATGCACGCCTCGACCGAGGAAGACGAATATAATATTGATGAAAACGGTTCATTACTTTCAACACCACAGTTTAACAGTTTTAATTTTACCAATTTCACTAATAATGCAGTGCAGCCTCAGCCAGATCCTATGCCGTTCTCATGTGAATTGTGTTCCAAGAGATTTCCGCTTAGGACTAGTCTGTGGAAGCACAAACGTGCTAAGCATGGAATCACTAATGCAAATCCCGCCGGCAACAGCGAAGCTCAGTTACAAATCGCCCCCACCGAAAGCCAAGGCGGTGGCCGATCGAGCTGTACTATTTGTAAAATTTCATTCTCTGATAAAAAATCTTACTATCGCCATAGAAAGAATGTTCACAAATCAGCGACGCAAATGTGTAAGATTTGTGGCAAGCCCCTGAATTCTACTCAGGAACTGTATGAACATCTAAAAGCAGCCCACGCTAGAGAGTTGCTAGGGTACAATGCCAACCAAAGTACGAGTAAAGTGCAGGATGTATCGCAAGATATGGACGGCGAATTTGATAACGATCAAGAAGTGGCCGACCCTAGTATCGATTATCAAGCACGTTATCCGTGCGACACTTGTGGAAAACAGTTTGTGGGACTTCTCTCATTGCAAAATCACCAATGTATAAATCAAGTACCTTCGCAACCGCAAACTTTCGACTGTGAGATTTGCCACAAAAGCTACACCTCTATCGCGGCATTAAAGAGCCATCGCGGCTGGCATCTTCGATCGCCCGATGGCAAGGCAGCCGCTAACAACAGCGGTCTATGGATGCCCCAGCATAAAGTCACTAGCAAGGTCAGCAAACATGAAGTCATAGAATCGGCTACACCTTCGGCGTCTACCTCTTCAGTTGTGACACGACTCCATTCCACTCCCGCGGCAGTGGCCAAACGGAGATTACCACCGGAAGTCGAAGTCACTGTTGTGAATCCGAACAAAAAGATGCGTTCAGACGATTCTGTTGAGATGGATCAGCAGAGCGATACCGCTGAAGGAAGGTACTGTACCATATGCGACAAAGATTTTACGAAACGCGCCGCATATCAACGCCACATGGACGAGGTCCATCAGCCGAACTCAGTGTTCTGTCCTGTCTGTGATAAGAGTTTTACAAGGAAATCTACTCTGCTCGTGCACATGAAGAAGCATTACGAAGGTGGCGGAGAGGGCAGTTCCTCGACGGCACAAGTAGAAGATGATGAAGGCTTCTCGTGTGATCTCTGCGGCGCGCAGTACGACACTGAGAACGCACTGAGGGCTCATCGAATCAGGCATCACGGGGAGGAGTCAGGGGAATCGGAGGATGACGGCCAAGTGCCAATGTCACAGCCTGGGGAGTTCACGTGCGGTCAATGCGGAGACGGTGTTGCCACTGCACGCGACCTGATCACGCATCGCGCTATACATTCAACACCAACTAAATTCTTCTGCAACATTTGCAAAGTTTATTTCGTGAGGGCACTGGATCTCTCCTCGCACACGCGCGCGCGACACGCTGACAATGAGAAAGTGTTCTTCCCATGCGCCATGTGTGATCGTTTCTACATGAACAAAAAGAGTTTGCAACGTCACATCGACATGGCCCACTGA
Protein Sequence: MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILASKIKDCVSVEINENDDLPTNVCRKCVDNVNNWHLFKTVCEKAQNKLLSITRKDGSLLEEMHIKSEPFFDEAYDDGVVIDGSYPELENASLSNKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDLVQESDAIDSLQTIEESDILHHSDHDSDTEAELQPDLDDIFIDCENGYACRNKNNFSKDPLKVRSGTKSDIKPKKRSLKAHKNCGKPRSAWQLLFTDDILDLIVSSTNANILSLGKGLERSTHVAEIKSLFGILYLNGIMRPTHQKCSDLWDKKCGVPSVISAMTNQRFNFLLQNLRFYNHNDDSSMMQFDTMKRIRKVFEIFALNCRTTFDIESTAVIDEIIVPVYGPCPFRYNIEKKPLKHGMKLVLLVDPNNFYVSNLDVITDPYFGADEIVKKMTQHLFGTGKTIMMDSWYYSPQLLHMLKMYHLYTIAAVNPKSDEIPPLFLSQYRKNCTYITGFVDEEISLVSHVNSQSKATNIITNMPQFYRKGTKKRTTSVSAYKKNQPAVQVLDVLMNYYTTMQHTNDWTLSLLFTLLNIASVNAQVIWSTRNNCVTARRSFIRDLGLGLLEDELLLVIDTIREPEAKSYIGLVSGPRYYKCRRRCKICIRSSPKRDRRTKQYCVKCEEFICREHSGVESEKDEEDEYEDEVKAPQPVKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKSHSRMQPKLRPNPFNPKARLMPNPISHKMQLIPKLMPKMMAQKIITPPKPIPIKSSKTSHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILDEPNDYDENQDEAGDAEMHNNQSQNYDTVDMDSENEIEIARQQENPDENVDDNEENHDEEENNQNDDDVGEEGDKVVENESEKDLSPQGASLGDDGNDNIDDDVNDESKDGERNNEEEDEGNDEAENELDASQTEENDDDEDPPVGLAPEVELNEDMHNSNTFNSELNDDEEEPDESADLNDTPDLEPKALDADKTLVTTAQKDFIKRFRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDDNGITADMVVEEPKGKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSAVPLACVHCGASYKDKTLLKKHIRNGDCTVYIHCDLCSEQFNNMQDFNDHALFVHTEHFVKTETQSVDGRLTDCYLCGTKTSKYTDLLKHFKAMHDEHIHNCQFCGVKFEQAVDLNKHMCMEHPGQTPGMHGTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQNVHPGAASQVNPENEFFCEICIRGFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTISNAVPPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNIDENGSLLSTPQFNSFNFTNFTNNAVQPQPDPMPFSCELCSKRFPLRTSLWKHKRAKHGITNANPAGNSEAQLQIAPTESQGGGRSSCTICKISFSDKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKVQDVSQDMDGEFDNDQEVADPSIDYQARYPCDTCGKQFVGLLSLQNHQCINQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVIESATPSASTSSVVTRLHSTPAAVAKRRLPPEVEVTVVNPNKKMRSDDSVEMDQQSDTAEGRYCTICDKDFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSSTAQVEDDEGFSCDLCGAQYDTENALRAHRIRHHGEESGESEDDGQVPMSQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663313;
90% Identity: -
80% Identity: -