Basic Information

Insect: Perizoma affinitatum
Gene Symbol: -
Assembly: GCA_961405105.1
Location: OY560193.1:4529921-4539624[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0048 0.31 12.0 1.5 3 23 675 696 674 696 0.96

2 24 5 3.2e+02 2.5 1.1 4 23 1065 1086 1063 1086 0.84

3 24 0.079 5.1 8.2 0.6 1 21 1091 1111 1091 1112 0.96

4 24 8.4 5.5e+02 1.8 0.4 1 23 1152 1175 1152 1175 0.90

5 24 0.00037 0.024 15.5 0.6 2 21 1185 1204 1184 1205 0.94

6 24 0.33 21 6.3 0.6 2 23 1213 1235 1212 1235 0.93

7 24 0.24 16 6.7 1.9 3 23 1255 1276 1254 1276 0.93

8 24 0.0021 0.13 13.2 2.1 1 23 1281 1304 1281 1304 0.93

9 24 0.15 9.8 7.3 0.0 1 23 1330 1353 1330 1353 0.90

10 24 0.023 1.5 9.9 3.4 1 23 1358 1380 1358 1380 0.97

11 24 0.011 0.71 10.9 0.2 1 23 1386 1409 1386 1409 0.95

12 24 0.0096 0.62 11.1 0.9 1 23 1422 1444 1422 1444 0.97

13 24 0.00021 0.014 16.3 1.8 1 23 1496 1519 1496 1519 0.97

14 24 0.003 0.19 12.7 1.4 1 23 1579 1602 1579 1602 0.96

15 24 0.0015 0.094 13.7 2.3 2 23 1629 1651 1628 1651 0.95

16 24 0.024 1.5 9.9 0.1 2 23 1657 1679 1656 1679 0.94

17 24 0.0079 0.51 11.4 0.3 1 21 1723 1743 1723 1744 0.95

18 24 0.0015 0.096 13.7 0.6 1 23 1754 1776 1754 1776 0.93

19 24 0.00013 0.0087 16.9 0.3 2 23 1864 1886 1864 1886 0.93

20 24 4e-07 2.6e-05 24.9 1.4 3 23 1893 1913 1892 1913 0.98

21 24 0.026 1.7 9.7 0.6 1 23 1933 1955 1933 1956 0.95

22 24 0.41 27 6.0 0.0 1 23 1977 1999 1977 1999 0.97

23 24 0.035 2.3 9.3 0.6 1 23 2005 2028 2005 2028 0.95

24 24 0.00044 0.029 15.3 0.4 1 23 2036 2059 2036 2059 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0048	0.31	12.0	1.5	3	23	675	696	674	696	0.96
2	24	5	3.2e+02	2.5	1.1	4	23	1065	1086	1063	1086	0.84
3	24	0.079	5.1	8.2	0.6	1	21	1091	1111	1091	1112	0.96
4	24	8.4	5.5e+02	1.8	0.4	1	23	1152	1175	1152	1175	0.90
5	24	0.00037	0.024	15.5	0.6	2	21	1185	1204	1184	1205	0.94
6	24	0.33	21	6.3	0.6	2	23	1213	1235	1212	1235	0.93
7	24	0.24	16	6.7	1.9	3	23	1255	1276	1254	1276	0.93
8	24	0.0021	0.13	13.2	2.1	1	23	1281	1304	1281	1304	0.93
9	24	0.15	9.8	7.3	0.0	1	23	1330	1353	1330	1353	0.90
10	24	0.023	1.5	9.9	3.4	1	23	1358	1380	1358	1380	0.97
11	24	0.011	0.71	10.9	0.2	1	23	1386	1409	1386	1409	0.95
12	24	0.0096	0.62	11.1	0.9	1	23	1422	1444	1422	1444	0.97
13	24	0.00021	0.014	16.3	1.8	1	23	1496	1519	1496	1519	0.97
14	24	0.003	0.19	12.7	1.4	1	23	1579	1602	1579	1602	0.96
15	24	0.0015	0.094	13.7	2.3	2	23	1629	1651	1628	1651	0.95
16	24	0.024	1.5	9.9	0.1	2	23	1657	1679	1656	1679	0.94
17	24	0.0079	0.51	11.4	0.3	1	21	1723	1743	1723	1744	0.95
18	24	0.0015	0.096	13.7	0.6	1	23	1754	1776	1754	1776	0.93
19	24	0.00013	0.0087	16.9	0.3	2	23	1864	1886	1864	1886	0.93
20	24	4e-07	2.6e-05	24.9	1.4	3	23	1893	1913	1892	1913	0.98
21	24	0.026	1.7	9.7	0.6	1	23	1933	1955	1933	1956	0.95
22	24	0.41	27	6.0	0.0	1	23	1977	1999	1977	1999	0.97
23	24	0.035	2.3	9.3	0.6	1	23	2005	2028	2005	2028	0.95
24	24	0.00044	0.029	15.3	0.4	1	23	2036	2059	2036	2059	0.96

Sequence Information

Coding Sequence: atgaCTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTCCCTACCACCAGTTCGGATGACTTGGAACCTTCCATCCTCGCTTCAAAAATAAAGGATTGTGTGTCTGTACAGATAAACGAAAATGACGATCTGCCGACGAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACTGTATGTACAAAGACACAAAACAAACTACTGTCTCTCATAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCAAATCAAAAGTGAACCATTCTTTGATGAGGCTTATGATGATGGAGTGGTTATTGATGGCTCATACCCTGAAGCTGAGAATGCGAGTTTTTCCAGCAAGCTACAGCCGGAAGGGCCCCCAATCCTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGAGATGTGTGGATCCACGAATGGATTGGCATCGAGTCCATGCAATATTGGATTTGGTTCAAGAGAGCAATATCATTGATTCACTCCAATCCGTTGAAGAGAGTGATGTTATACACCACTCAGATCACGATTCAGACACAGAGGCTGAGCTCCAACCAGACTTAGATGATACTTTCATTGATTGCAAAAAAGGATATGCTTGTAGAAATCAAAATACCTTATACAAAAATCCTCAACGAGTGATCTCGGGAACAAAGGATgcaataaaactgaaaaaacgGAAAGTCAATGTTCATATACACTGTGGTAAACCAAAAAACGCTTGGCAGCTTCTCTTCACCGACGACTTACTCGACCTCATTGTCTCATCAACAAATGAAAACATAGTCGCACAACACATAGGCCATGAAGGCTGCACCAATGTTGGCGAAATCAAAACTCTAATTGGAATTTTGTACTTGAACGGTATAATGAGGCCAACTCATCACAAATGCAGTGACCTCTGGGACAAAGACTGCGGCGTCCCGTCCGTTATAAACGCAATGACAAATAAACGCTTCAactttcttttacaaaacatctGTTTCTATAACCAAGTTGATGATGATAGTATTATGCAGTTCGATACAATGAAACGAATCCGCAAATTGTTTGAGATCTTCGCTATGAACTGTAGAACAACCTTCGACGTCGATAGTACCGCGGTCGTTGATGAGATTATTGTGCCAGTTTACGGACCTTGCCCGTTTCGATACGATATCGATAAGAAACCACTGAAACGTGGAATAAAAATGGTTTTGCTGGTCGATCCGAATAATTTCTATGTCAGCAATCTGGACGTGATAACCGACCCGTATTTCGGAGCTGAGGAGATAGTCAAAAAGCTCACTCAACACATGTATGGTACTGGGAAAACTATTATAATGGACAGTTGGTACTTTACCTCTGAACTGATGAAGACGCTCAGAAATGAACAGCTTTATACGATAGCGGCATTACATCCTAAGAGCGACGGAATACCCCCGCTTTTCCTATCGCAGTACAGAAAAAGTTGTACATACATTTCTGGATTCGTTGATTGCGAAGTATCGCTGACGTCTCACGTTAACTCACAGTTGAAAGCGACCAACGTCGTCACGAACGTGCCACAGTTTTATCGGAAAGGTCACACAAACCGCACTACATCCGTATCAGCTTACAAAAAGAATCAGTCAGCTGTTGAAGTCCTGGATGTTCTGATGCATTATTATACAACGTTGCAACACACAAACGATTGGACACTTTCATTGTTCTTTACATTGCTCAATATTGCTTCGGTTAATGCTCAGGTCATATGGAGCTCGCAGAATACTACAGTTACTCCCAGGCGTTTATTCATCAGATATTTGGGGTTAGGTCTGTTGGAGGATGAGGGCCTGGAAAGTGAGAAGGAGGAAGAAGATGAATATGAAGAGGAGAAAATCCCCCAGCCCGTGAAGGTTCCGCACATGCCGGAAGTGTCCATCACCGTGATGCGGCCCACTGGTGAGACGCTCCAATCCCGACAAGGTATCCAACAGATAGCATCCAAGGACTGCCTTATCTGCGGCCGATCCTACAGATACTCGCACAACGCACGCAGACACGAACTCACCTCACACCAATTTGACCGctacaccaacaaaataaataacaaaaaaacgcaTAAACCCAAACTGAGACCTAATCCTTTCAATCCGAAAGCGAGACTTATGCCAAATCCTGTTAGCCATAAAATGCAACTAATGCCCAAAGCTATGCCGAAATTGATGCCGCAATTCTCTCAAATGAGTGCTCAACTCAACAAGAAAATTATAACTCCACCGAGACCAATACCCATTAAAACTTTAAAGACACCGCAGAACAATTTGCCGTATCCTTTGCGTATCAAAGCTCTCAAAGATTTGCAGATAAAGAAAAAGGAACCACAAATTTTGAAAACCTTACTCACATCTAAACCAGAGGTCCTGGTGTCCGAGCCTGAGATTATGAACTCTGGGCCGGAGAGTCCTGAAACTCTGATCTCTGAACCTGAAATCGCATCCTTCCAAGTTGAGACTATTCTTTCGGAGCCCAACGACTACGATGAACATCAAGAAGAAGGGGATTCAGAAATGCATAATAATCAGAGCCAAAACTATGACACCGTTGATATGGACTCTGAAAATGAAATAGAAATTGCACGACAGCAAGAAAATGTGGGTGAGAACGAAGAACATCATGAAGAAGATGACAATATCCAGCATAACGACGAAAATAACTCTGAAGAGGCAGACAAAGTGGAAGAAAATGGAAGTGAAAAAGATCTCAGTCCCCAAGGAGCTCTTGGTGAAGAACAAAGTGCAAATATGGATGTTGACGAAAATGATGATGCCAAAGGCGAAGAACTTAACAATGAAGAAGAAGAGGAAGGAAATGAGGAAGCTGATAATGAGGATCTAGAGACCAGTCAGGGGCCGGAGGAAAATGAGGACAGTGAAGATCATTCGCTTGTCGGACTAACACCGCAAGTTGAGTTGAACGAAGACCTGCACAACTCAAACACTTTCAATAGCGAAATGAATGATGAAGAAGAACCAGACGAAAGCGCTGACCTCAACGATACTGCGGACGGTGATGTTGCTGACAAGGATATCGATCCCGAAAAAACGTTGGTCACCAACGTTCAAAAAGACTTCATCAAAAGATATCGTGACATAATCCTACAGATAAACACCAAGAGATGTCTCTGTTGCGATAAAGAGTATCCACGCAGAAAAGCTGTAATACAACATCTTCAGAAAAATGGACACAAAGTTCCAAAACATACTTGCTATAACTGCGTCGTTACTTTCACCCATATTGGCGCTCTACTCAGCCACATGAGGCAAAACTCTTGCACCGATCTGTGGAAGATTATTTACGACGAAAATGGAATCACCAGCGACATGATTATCGAGGAGCCTAAGAGCAAGATACAAGCCAAAGATATTTTCAATGCGAAATCTTATGCTTGCAGATTGTGCCCGGCCAAATTCCAGCTAAAGCAATCTATCATGAAGCATGTTTCTGAGTTTCATGAAGATGGCCAGTTCGCGGTACCTCTCAGCTGCGTCCACTGCGGAGCCTCGTACAAAGATAAAACCTTGCTCAAAAAACATATTCGCAATGGTGATTGCACTGTTTATATCCACTGTGATTTATGTTCGGAGCAATTTACCAACATGCAAGACTTCAACGATCATGCATTGTCAGCTCACGCTGAGCACTTTGTCAAAACTGAAAACCAGACCGTCTCTGATGGACGACTCTCTGACTGCTATCTTTGTGGGACAAAGACTAGCAGTTATACGCATCTTCTCAAACACTTCAAAGCGGTGCACGATGAAATACCGCATCACTGCCAGTTTTGCGGCGTCAAATTTGAGCAACCCGTCGATCTAAACAAACACATGTACCTGGAACATCCTGGTCAAACTCCGGACTTGCAGGTTGCGGAACCAGACATGTCCCTCGTCAAAGAAGAAGCTGAGGAATATCACTACTCTTGCACCGAGTGTAATGCAATATTTGAGACTGTAGACGCATGGACTGATCACCAAGTAGCGGAACATAACCAAGTGGCGCACCATTGCGACCAATGTGAAAAGAAATTCTTGCGGCCTTCAGAACTCGCAGAACACAAGAACACTCACCTAAGAGTGAAGTTTTATCCTTGCAGCATCTGCTCAAACTCATACAGCACCCCACAAAAATTGTCGGACCACGTCCAAAACCTACATCCCGGGGTAGCTTCCCAGGTCAATCCAGAAAACGAATTTTTCTGCGATATCTGTATTCGAGGTTTCAAAAGTCGTCAGGCGTATTCGAATCATATGCGCATTCACGCGAAAGTGCCGACCACTAATAGAAAGCCCGGTGAACCTAAGGGATTCGACCCGCGCATCATTGGGAAACCCATCAAACAAATAACAGTGTCCAATGTCGTTCAACCTGGTTTCATTAATTTCAAGCCAAATGCGAATGTTCCTAATGCACCGTATTCGTGTGATATTTGTGGCAAAGGCTTCAtgcataagaaaaatatttggaaaCACAAAAAAGTGTTGCACGCCGACATAATAAACGACAGGAACGACAGCGAAGACAATACGATGCATGCCTCCACCGAAGAAGACGAATATAACGTTGATGAAAATGGTGCACTACTTTCAACACCACAATTCAacagttttaattttacaaatttctCTAATAATGTTGTTCAGCCGCAGCAAGATCCGATGCCTTTCTCTTGCGAATTATGTTCCAAGCGATTCCCGCTTAGGACTAGTCTGTGGAAGCACAAACGCGCTAAGCACGGAATCACGAACGCAAATCCCGGAGGTAGTGGCGAGGCTCAAGCAGCCCCCACCGAAGGGCATGGTGGCGGTCGATCGAGCTGTACCATTTGCAAAATAACATTCACTGACAAAAAATCTTACTATCGCCACAGAAAGAACGTTCATAAATCAGCGACGCAAATGTGCAAGATATGTGGCAAGCCACTGAATTCCACTCAGGAACTGTACGAACATCTAAAAGCAGCTCACGCCAGAGAGTTGCTCGGTTACAATGCCAATCAGAGTACCAGTAAAGCTCAGGATGTGTCACAGGACATGGACGGCGAACTTGACAACGAACAAGATTTAGTAGATCCTAGTGTCGATTACCAAGCACGGTATCCGTGCGATACTTGCGGCAAACAGTTTGTGGGACTGCTCTCTTTGCAGAATCATCAGTGCATAAATCAAGCACCTTCGCAACCACAGACATTCGACTGTGAAATCTGTCACAAAAGTTACACTTCCATCGCCGCGTTGAAGAGTCATCGCGGTTGGCATCTTCGTTCGCCCGATGGAAAGGCGGCCGCTAACAATAGCGGTCTTTGGATGCCTCAGCACAAAGTAACTAGCAAGGTCAGCAAACATGAAGTCTTAGAACCCGTCACGCCTGTGGTGCCTCGACAACAATCGACTCCTGCGGCTGCGGCGAAAAGAAGATTGCCTCCCGAAGTGGAAGTGACCGTCGTGAACCCGAACAAAAAGATGCGCTCGGATGATTCGGTGGAGATGGACCAGCAAGGTGAAATTGTCGAAGGGAGGTACTGTACGATATGTGACAAAGAGTTCACTAAACGCGCCGCGTATCAACGCCACATGGACGAGGTACATCAGCCCAATTCGGTTTTTTGTCCAGTCTGCGATAAGAGTTTCACAAGGAAATCTACTTTGCTCGTGCACATGAAGAAGCATTACGAAGGCGGCGGAGAGGGTAGTTCTTCAACGGCTCAGATGGACGACGAGGAAAGCTTTTCGTGTGACCTCTGCGACGCGCAATACGATACAGAGAACGCTCTGAGGGCGCATAAGATCAGGCACCACGGCGAAGAATCGGGTGATTCGGAGGATGACGGTCAAGTGACCATCCCACAGCCTGGAGAGTTCACATGTGGGCAGTGCGGAGATGGCGTCGCCACCGCGCGCGATCTTATCACGCATCGAGCCATACATTCAACACCTACGAAATTCTTCTGTAACATATGCAAGGTTTACTTCGTGAGAGCATTGGACCTATCGTCGCACACACGCGCACGGCACGCTGATAATGAGAAAGTGTTCTTCCCGTGTGCGATGTGCGATCGATTCTATATGAACAAGAAGAGTTTGCAACGGCACATCGACATGGCACACTGA
Protein Sequence: MTVNYDRVCRLCLSSRGELLPIFPTTSSDDLEPSILASKIKDCVSVQINENDDLPTNVCRKCVDNVNNWHLFKTVCTKTQNKLLSLIRKDGSLLEEVQIKSEPFFDEAYDDGVVIDGSYPEAENASFSSKLQPEGPPILASLGLTPRSDKRCVDPRMDWHRVHAILDLVQESNIIDSLQSVEESDVIHHSDHDSDTEAELQPDLDDTFIDCKKGYACRNQNTLYKNPQRVISGTKDAIKLKKRKVNVHIHCGKPKNAWQLLFTDDLLDLIVSSTNENIVAQHIGHEGCTNVGEIKTLIGILYLNGIMRPTHHKCSDLWDKDCGVPSVINAMTNKRFNFLLQNICFYNQVDDDSIMQFDTMKRIRKLFEIFAMNCRTTFDVDSTAVVDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDPNNFYVSNLDVITDPYFGAEEIVKKLTQHMYGTGKTIIMDSWYFTSELMKTLRNEQLYTIAALHPKSDGIPPLFLSQYRKSCTYISGFVDCEVSLTSHVNSQLKATNVVTNVPQFYRKGHTNRTTSVSAYKKNQSAVEVLDVLMHYYTTLQHTNDWTLSLFFTLLNIASVNAQVIWSSQNTTVTPRRLFIRYLGLGLLEDEGLESEKEEEDEYEEEKIPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELTSHQFDRYTNKINNKKTHKPKLRPNPFNPKARLMPNPVSHKMQLMPKAMPKLMPQFSQMSAQLNKKIITPPRPIPIKTLKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYDEHQEEGDSEMHNNQSQNYDTVDMDSENEIEIARQQENVGENEEHHEEDDNIQHNDENNSEEADKVEENGSEKDLSPQGALGEEQSANMDVDENDDAKGEELNNEEEEEGNEEADNEDLETSQGPEENEDSEDHSLVGLTPQVELNEDLHNSNTFNSEMNDEEEPDESADLNDTADGDVADKDIDPEKTLVTNVQKDFIKRYRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDENGITSDMIIEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQFAVPLSCVHCGASYKDKTLLKKHIRNGDCTVYIHCDLCSEQFTNMQDFNDHALSAHAEHFVKTENQTVSDGRLSDCYLCGTKTSSYTHLLKHFKAVHDEIPHHCQFCGVKFEQPVDLNKHMYLEHPGQTPDLQVAEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQNLHPGVASQVNPENEFFCDICIRGFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQITVSNVVQPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEDNTMHASTEEDEYNVDENGALLSTPQFNSFNFTNFSNNVVQPQQDPMPFSCELCSKRFPLRTSLWKHKRAKHGITNANPGGSGEAQAAPTEGHGGGRSSCTICKITFTDKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKAQDVSQDMDGELDNEQDLVDPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQAPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVLEPVTPVVPRQQSTPAAAAKRRLPPEVEVTVVNPNKKMRSDDSVEMDQQGEIVEGRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGGEGSSSTAQMDDEESFSCDLCDAQYDTENALRAHKIRHHGEESGDSEDDGQVTIPQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663313;
90% Identity: iTF_01171653;
80% Identity: -