Basic Information

Insect: Xanthorhoe spadicearia
Gene Symbol: -
Assembly: GCA_947086425.1
Location: OX352197.1:8424900-8434296[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0045 0.25 12.1 1.5 3 23 648 669 647 669 0.96

2 24 4.7 2.7e+02 2.6 1.1 4 23 1022 1043 1020 1043 0.84

3 24 0.073 4.2 8.2 0.6 1 21 1048 1068 1048 1069 0.96

4 24 7.8 4.5e+02 1.9 0.4 1 23 1109 1132 1109 1132 0.90

5 24 0.00028 0.016 15.9 0.9 3 21 1143 1161 1143 1162 0.96

6 24 4.6 2.6e+02 2.6 0.5 2 23 1170 1192 1169 1192 0.92

7 24 0.042 2.4 9.0 0.8 3 23 1211 1232 1209 1232 0.92

8 24 0.0089 0.51 11.1 2.8 1 23 1237 1260 1237 1260 0.93

9 24 0.14 8 7.4 0.0 1 23 1286 1309 1286 1309 0.90

10 24 0.021 1.2 10.0 3.4 1 23 1314 1336 1314 1336 0.97

11 24 0.0046 0.26 12.0 0.1 1 23 1342 1365 1342 1365 0.95

12 24 0.006 0.34 11.7 1.6 1 23 1378 1400 1378 1400 0.97

13 24 0.0002 0.011 16.3 1.8 1 23 1452 1475 1452 1475 0.97

14 24 0.0039 0.22 12.2 0.9 1 23 1534 1557 1534 1557 0.95

15 24 0.0023 0.13 13.0 1.5 2 23 1588 1610 1587 1610 0.95

16 24 0.4 23 5.9 0.1 2 23 1616 1638 1615 1638 0.92

17 24 0.0073 0.42 11.4 0.3 1 21 1679 1699 1679 1700 0.95

18 24 0.0014 0.078 13.7 0.6 1 23 1710 1732 1710 1732 0.93

19 24 0.0002 0.012 16.3 0.3 2 23 1825 1847 1825 1847 0.93

20 24 3.7e-07 2.1e-05 24.9 1.4 3 23 1854 1874 1853 1874 0.98

21 24 0.0059 0.34 11.7 0.4 1 23 1891 1913 1891 1914 0.95

22 24 0.38 22 6.0 0.0 1 23 1937 1959 1937 1959 0.97

23 24 0.033 1.9 9.3 0.6 1 23 1965 1988 1965 1988 0.95

24 24 0.00041 0.023 15.3 0.4 1 23 1996 2019 1996 2019 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0045	0.25	12.1	1.5	3	23	648	669	647	669	0.96
2	24	4.7	2.7e+02	2.6	1.1	4	23	1022	1043	1020	1043	0.84
3	24	0.073	4.2	8.2	0.6	1	21	1048	1068	1048	1069	0.96
4	24	7.8	4.5e+02	1.9	0.4	1	23	1109	1132	1109	1132	0.90
5	24	0.00028	0.016	15.9	0.9	3	21	1143	1161	1143	1162	0.96
6	24	4.6	2.6e+02	2.6	0.5	2	23	1170	1192	1169	1192	0.92
7	24	0.042	2.4	9.0	0.8	3	23	1211	1232	1209	1232	0.92
8	24	0.0089	0.51	11.1	2.8	1	23	1237	1260	1237	1260	0.93
9	24	0.14	8	7.4	0.0	1	23	1286	1309	1286	1309	0.90
10	24	0.021	1.2	10.0	3.4	1	23	1314	1336	1314	1336	0.97
11	24	0.0046	0.26	12.0	0.1	1	23	1342	1365	1342	1365	0.95
12	24	0.006	0.34	11.7	1.6	1	23	1378	1400	1378	1400	0.97
13	24	0.0002	0.011	16.3	1.8	1	23	1452	1475	1452	1475	0.97
14	24	0.0039	0.22	12.2	0.9	1	23	1534	1557	1534	1557	0.95
15	24	0.0023	0.13	13.0	1.5	2	23	1588	1610	1587	1610	0.95
16	24	0.4	23	5.9	0.1	2	23	1616	1638	1615	1638	0.92
17	24	0.0073	0.42	11.4	0.3	1	21	1679	1699	1679	1700	0.95
18	24	0.0014	0.078	13.7	0.6	1	23	1710	1732	1710	1732	0.93
19	24	0.0002	0.012	16.3	0.3	2	23	1825	1847	1825	1847	0.93
20	24	3.7e-07	2.1e-05	24.9	1.4	3	23	1854	1874	1853	1874	0.98
21	24	0.0059	0.34	11.7	0.4	1	23	1891	1913	1891	1914	0.95
22	24	0.38	22	6.0	0.0	1	23	1937	1959	1937	1959	0.97
23	24	0.033	1.9	9.3	0.6	1	23	1965	1988	1965	1988	0.95
24	24	0.00041	0.023	15.3	0.4	1	23	1996	2019	1996	2019	0.96

Sequence Information

Coding Sequence: ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCCCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCACCCATCCTTGCTTCTAAAATAAAGGAATGCGTGTCTGTGGAGATAAACGAAAATGACGATCTGCCGACAAATGCCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACTGTATGTTCAAAGACACAAAACAAACTACTGTCTCTCACAAGAAAGGATGGCAGCCTACTAGAAGAGGTGCATATCAAGAGTGAACCATTTTCTGATGAAGCTTATGATGATGGTGTGGTTATTGATGGCTCATATCCTGAAGCTGAGAATGCCAGCCTATCAAGTAAACTGCAGCCTGAAGGGCCTCCAATCCTGGCTTCATTGGGACTCACACCAAGAAGCGATAAGAAATGTGTGGATCCACGAATGGATTGGCACCGAGTCCATGCAATATTGGATATGGTTCAAGACAGCGATGTCATTGATTCACTGCAAAATGTTGAGGAGACTGATGTTTTACACCATTCCGATCATGAATCAGACATAGAAGCTGACCTCCAGACAGACCTAGATGATGCATTTATACATTGTAAAAAAGGCTATGCTTGTAAAAATAAAACCATATTGTTCAAAAGTCCACAAAAATACAGCTTCGGTGTCAAAGATACTATAAAACTGAAAAAGAGAAAAGCTGAGATTGATAAGCACTGTGGTAAACCTAAAAATGCTTGGCAGTTACTGTTCACTGATGATCTACTCGATGTCATTGTCTCATCAACAAATGAGAATATACTCAGACTTGGCAAAGGCATCGAAGGGTGCACCAATGTTGGTGAAATCAAAACTCTTATCGGAATTTTGTACTTGAATGGAATAATGAGGCCAACTCATCAGAAGTGCAGTGATCTTTGGAACTATAAATGCGGCGTCCCGGCCGTTATAAAAGCAATGAGAAATGAGCGTTTCGAATTTCTCATACAAAATATTCGTTTTTATAGTCAGCAAGACGACGATTGCATAATGCAGTTTGATACCATGAAACGCATTCGGAAAGTATTCGAAATCTTCGCATTGAACTGCAGAACAACCTTCGACGTGGAAAAAGTAGCTGTCGTTGATGAGATCATTGTCCCAGTTTATGGACCTTGCCCGTTTCGATACGACATCTTAAAGAAACCATTGAAACGTGGTATAAAAATGATATTACTGGTAGATCCGAATAATTTCTACGTAAGCAACATGGATGTGATTATGGATCCGTATTTTGGAGCTGAGGAAATTGTAAAAAACATCACTCAACATTTGTATGGGACTGGGAAAACTATCATAATGGATAGTTGGTTCTTTTCTTATCCTCTACTAAAGACACTGATGAGTTATAAGCTTTATACAATAGCAGCATTGCATCCAAAGAGCGATGACATACCACCTCTATTCCTATCGAACTACAGAAAAAATTGTACATACATTTCTGGGTTTCTGGACAGTGAAGTATCGCTTACTTCTCACGTGAACTCAGAGTCGAAAACAACAAATGTAGTTACAAACTTGCCACAATTCTATCGTAAGGGTCACACCACCCGCACCACATCTGTCTCAGCTTACAAGAAAAACCAATCAGCTGTTCAAGTCTTAGATGTTCTGATGCACTATTACACGACCATGCAACATACAAACGATTGGACAATTTCATTGTTTTGTACATTGCTTAACATTGCCTCGGTCAATGCTCAGGGAATGGAGAGTGAGAAAGATGAGGAAGAAGAATATGAAGAGGAGGCGAAAACCCCTCGGCCAGTGAAAGTTCCTCACATGCCTGAAGTTTCCATCACCGTGATGCGTCCTACCGGAGAGACCCTTCATGCACGCCAAGGTATCCAACAGATAGCCTCCAAAGACTGCCTCATTTGCGGTCGATCTTATAGATACTCACACAATGCAAGGCGACACGAACTCACGTCACACAAATTCGACCGCTACACAAATAAGATAAACAACAAAAAAACACACTCCCATATGCAACCTAAACTTAGACCCAACCCTTTCAACCCGAAAGCGCGACTCATGCCCAATCCGATCAGCCATAAAATGCAGTTGTTACCTAAGATAATGCCAAAAATGATCCCTCAAAAGATTATTACCCCACCTAAACCGATTCCTATTAAAACATCTAAAACACCGCAGAATAACTTACCATATCCGTTGCGTATCAAAGCTCTTAAAGATTTGCAAATTAAAAAGAAAGAACCTCAGATTTTGAAGACGTTGCTCACATCTAAGCCTGAAGTCTTGGTGTCAGAACCGGAGATCATGAACTCTGGTCCAGAAAGTCCTGAAACCTTGATATCTGAACCAGAGATTGCTTCTTTCCAAGTTGAAGCTATACTTTCGGAACCCAATGATTACGATGAAAATCAAGATGATGCTGATGTCGACATGCATAACAATCAGAGCCAAAATTACGACACCGTCGATATGGACTCTGAAAATGAAATAGAAATTGCACGACAACAAGAAAATATTGATAACGATGATAATCACGACGAAGACGACAACCAGCAAGATGACGGGAATAACATTGATGAAGTCGACAAAGCGGGTGAAAATGAAAGTGAGAAAGATCTAAGTCCCCAAAACGCAGGTCTCGACGAAGAAGGCAACGGAGACGCTGACGAAAATGACGAAGCCAAAGATGATGAACCTAATAATGAAGATGAAGAAGGAAATGAGGATGGGGAAAATGAGCTAGACGCAACACAAGTCGCTGATGAAAATGATGATGATGATCCGCCTGTTGGAATAGCGCCTGAAGTCGAACTCAACGAAGATATGCACAATAACTCAAATACTTTCACCAGCGAGTTAAATGAGGATGAAGACGAACCTGACGAAAGCGCTGAACTCAATGACACCGTCGATGGCGAACAGAAAGGCGGTGAAACAACATACGTTACAAACGCTCAAAGAGACTTCATCAAGAGGTATCGTGACATAATCCTACAGATTAATACCAAGAGATGCCTGTGTTGCGATAAAGAGTATCCTCGCAGAAAAGCTGTAATACAACATCTCCAGAAAAACGGACACAAAGTTCCGAAGCATACGTGCTATAATTGTGTTGTTACTTTCACCCATATTGGCGCTCTACTAAGCCACATGAGACAGAGCTCTTGCACCGATCTGTGGAAGATTATCTATGATGAGAATGGTATAACCAGTGAAATGGTGGTTGAAGAACCTAAGAGCAAAATTCAAGCCAAAGACATTTTCAACGCTAAATCTTACGCTTGCAGGTTATGTCCTGCTAAATTCCAGCTAAAACAATCTATAATGAAACATGTTTCTGAGTTCCATGAAGATGGCCAGTCTTCTGTGCCCTTAGGCTGCGTTCATTGCGGAGCCTCTTTCAAAGATAAAACTTTGTTGAAGAAACATATCCGCAACGGCGAGTGCACGGTTTACATCCATTGTGATCTTTGTTCTGAACAATTCACCCTCATGCAAGAGTTCAATGATCATGCGTTGTCTGTTCACGCTGAGCACTTTGTCAAAAATGAAAACCAGGTCGTTGACGGACGACTCACAGACTGTTATCTTTGTGGGACAAAGACTACTAGCTACTATAATTTGCTGAAACATTTCAAAGCGGTGCACGATGCAATCCCACATCACTGCCAGTTCTGTAATGTCAAGTTTGAGCAGCCTGTTGACTTAAACAAGCACATGTATCTCGAGCATCCAGGGCAAACTCCTGATATGCAATCATCCGAGCCAGACATGTCTTTAGTGAAGGAAGAAGCTGAGGAATACCATTATTCTTGCACAGAGTGCAATGCGATATTCGAAACTGTCGATGCGTGGACTGACCACCAAGTGGCTGAACATAATCAAGTGGCTCATCACTGCGACCAGTGCGAAAAGAAGTTCCTTCGGCCTTCAGAACTCGCTGAGCATAAGAACACCCACTTGAGAGTCAAATTCTATCCATGCAGCATTTGCCCTAACTCATACAGTACCCCACAGAAACTATCAGATCACGTTCAGAACGTACATCCTGGCGCAGCATCTCAGGTCAGCTCCGACAATGACTTTTTCTGCGAGATTTGTATTCGTCGCTTCAAAAGTCGCCAGGCTTATTCGAATCATATGCGCATTCATGCCAAAGTGCCGACCACTAATAGAAAACCTGGTGAACCCAAAGGATTTGATCCACGTATCATTGGGAAACCCATCAAGCAATTCACTATTTCTAATGCCGTTCCTCCTGGATTCATCAACTTTAAGCCAAATGCTAATGTTCCTAATGCTCCTTATTCGTGTGATATTTGCGGCAAAGGTTTCATGCACAAGAAAAATATTTGGAAGCACAAAAAAGTGTTGCATGCCGATATAATAAACGACAGGAACGATAGTGAGGAAAACACAATGCATGCCTCTACTGAAGAAGATGAGTACAATGTTGATGAAAATGGTTCAATACTGTCGACGCCACAATTTAACAGTTTTAATTTTACAAATTTCAATAATACAGTACAGCCTCAGGCAGATCCGATGCCTTTTGCATGTGAATTATGTTCCAAACGATTCCCACTTAGAACCAGTCTCTGGAAGCACAAACGCGCTAAGCACGGCATCACAAATGCAAATCCAAGCGGAAGTAGCGGAGGTTCTCAGGCTGCCAGCGACGGAATGTCCGAGAACCCTGCGGGAAGTCGCTCCAGCTGTACCATCTGCAAAATTACTTTTGCTGACAAAAAGTCTTACTATCGTCACAGGAAGAATGTACACAAATCGGCAACACAAATGTGCAAGATTTGTGGCAAACCATGGAACTCCACTCAGGAACTGTACGAACATCTGAAAGCAGCTCACGCTCGAGAACTACTAGGATATAATGAGAACCAAAGTACGAGTAAAATGCAAGAACAAGATGTTGATGATTTTGACAACGAACCTGATAGTGGAGACCCTAGCGTTGAATATCAAGCACGATACCCGTGCGATACCTGTGGCAAACAATTTGTGGGACTTCTTTCGTTACAAAATCACCAGTGCATTAACCAAGTACCAACACAGCCTCAGACCTTTGACTGTGAGATTTGCCACAAAAGCTACACATCCATAGCCGCGTTGAAAAGCCATCGTGGCTGGCATCTTCGATCGCCCGACGGCAAGGCGGCCGCTAACAACAGCGGCCTCTGGATGCCTCAGCACAAGGTAACCAGCAAGATCAGCAAACATGAGGTCGTGGAATCAATCGCGCCTGCTGCGTCCACGTCATCAGTTGTAACACGACTTAGTTCGAACCCGGCGGCTGCAGCCAAAAGGAGGCTTCCACCTGAAGTTGAAGTGACTGTCGTGAATCCCAACAAAAAGATGCGCTCGGATGATTCCGGCGAGACGGATCAGAACGACGGCTCCGAAGGAAGGTACTGCACAATATGCGACAAAGATTTCACGAAACGCGCAGCGTATCAACGCCACATGGACGAAGTCCATCAGCCAAATTCCGTGTTTTGTCCGGTCTGTGATAAGAGTTTTACAAGGAAATCTACTTTGCTTGTGCACATGAAGAAGCACTACGAAGGCGAGGGTTCCTCAACAGCGCAGGTTGACGATGATGAAGGTTTTTCCTGTGACCTTTGCGGAGCGCAGTACGATACAGAGAACGCATTGAGAGCGCATCGAATCAGGCATCACGGGGAGGAATCTGGCGATGATGAAGATGAAGATGATGGCCAGGTCCCCATCGCCCAGCCTGGTGAGTTCACTTGCGGCCAGTGCGGGGACGGCGTGGCTACAGCCCGTGATCTAATCACGCATCGCGCCATACATTCAACACCTACCAAATTCTTCTGCAACATTTGCAAAGTGTACTTCGTGAGAGCGTTGGACTTGTCTTCACACACCCGAGCGCGACACGCGGACAATGAGAAAGTGTTTTTTCCATGCGCCATGTGTGATCGCTTTTACATGAATAAAAAGAGCTTGCAACGACACATAGATATGGCCCACTGA
Protein Sequence: MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILASKIKECVSVEINENDDLPTNACRKCVDNVNNWHLFKTVCSKTQNKLLSLTRKDGSLLEEVHIKSEPFSDEAYDDGVVIDGSYPEAENASLSSKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQDSDVIDSLQNVEETDVLHHSDHESDIEADLQTDLDDAFIHCKKGYACKNKTILFKSPQKYSFGVKDTIKLKKRKAEIDKHCGKPKNAWQLLFTDDLLDVIVSSTNENILRLGKGIEGCTNVGEIKTLIGILYLNGIMRPTHQKCSDLWNYKCGVPAVIKAMRNERFEFLIQNIRFYSQQDDDCIMQFDTMKRIRKVFEIFALNCRTTFDVEKVAVVDEIIVPVYGPCPFRYDILKKPLKRGIKMILLVDPNNFYVSNMDVIMDPYFGAEEIVKNITQHLYGTGKTIIMDSWFFSYPLLKTLMSYKLYTIAALHPKSDDIPPLFLSNYRKNCTYISGFLDSEVSLTSHVNSESKTTNVVTNLPQFYRKGHTTRTTSVSAYKKNQSAVQVLDVLMHYYTTMQHTNDWTISLFCTLLNIASVNAQGMESEKDEEEEYEEEAKTPRPVKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKTHSHMQPKLRPNPFNPKARLMPNPISHKMQLLPKIMPKMIPQKIITPPKPIPIKTSKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYDENQDDADVDMHNNQSQNYDTVDMDSENEIEIARQQENIDNDDNHDEDDNQQDDGNNIDEVDKAGENESEKDLSPQNAGLDEEGNGDADENDEAKDDEPNNEDEEGNEDGENELDATQVADENDDDDPPVGIAPEVELNEDMHNNSNTFTSELNEDEDEPDESAELNDTVDGEQKGGETTYVTNAQRDFIKRYRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQSSCTDLWKIIYDENGITSEMVVEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPLGCVHCGASFKDKTLLKKHIRNGECTVYIHCDLCSEQFTLMQEFNDHALSVHAEHFVKNENQVVDGRLTDCYLCGTKTTSYYNLLKHFKAVHDAIPHHCQFCNVKFEQPVDLNKHMYLEHPGQTPDMQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICPNSYSTPQKLSDHVQNVHPGAASQVSSDNDFFCEICIRRFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTISNAVPPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGSILSTPQFNSFNFTNFNNTVQPQADPMPFACELCSKRFPLRTSLWKHKRAKHGITNANPSGSSGGSQAASDGMSENPAGSRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPWNSTQELYEHLKAAHARELLGYNENQSTSKMQEQDVDDFDNEPDSGDPSVEYQARYPCDTCGKQFVGLLSLQNHQCINQVPTQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVESIAPAASTSSVVTRLSSNPAAAAKRRLPPEVEVTVVNPNKKMRSDDSGETDQNDGSEGRYCTICDKDFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGEGSSTAQVDDDEGFSCDLCGAQYDTENALRAHRIRHHGEESGDDEDEDDGQVPIAQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663313;
90% Identity: iTF_00267412;
80% Identity: -