Hvit012204.2
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- -
- Assembly
- GCA_951804965.1
- Location
- OX638093.1:16557888-16566810[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0053 0.41 12.0 1.5 3 23 674 695 673 695 0.96 2 24 5.5 4.3e+02 2.5 1.1 4 23 1066 1087 1064 1087 0.84 3 24 0.087 6.8 8.2 0.6 1 21 1092 1112 1092 1113 0.96 4 24 9.3 7.3e+02 1.8 0.4 1 23 1153 1176 1153 1176 0.90 5 24 0.0013 0.1 14.0 0.7 3 21 1187 1205 1187 1206 0.96 6 24 0.4 32 6.1 0.6 3 23 1215 1236 1213 1236 0.93 7 24 0.83 65 5.1 0.6 3 23 1255 1276 1254 1276 0.93 8 24 0.0023 0.18 13.2 2.1 1 23 1281 1304 1281 1304 0.93 9 24 0.17 13 7.3 0.0 1 23 1330 1353 1330 1353 0.90 10 24 0.025 1.9 9.9 3.4 1 23 1358 1380 1358 1380 0.97 11 24 0.03 2.3 9.7 0.1 1 23 1386 1409 1386 1409 0.95 12 24 0.0053 0.42 12.0 0.8 1 23 1422 1444 1422 1444 0.97 13 24 0.00023 0.018 16.3 1.8 1 23 1496 1519 1496 1519 0.97 14 24 0.0021 0.17 13.3 1.5 1 23 1577 1600 1577 1600 0.96 15 24 0.0027 0.21 13.0 1.5 2 23 1629 1651 1628 1651 0.95 16 24 0.026 2 9.9 0.1 2 23 1657 1679 1656 1679 0.94 17 24 0.0087 0.68 11.4 0.3 1 21 1723 1743 1723 1744 0.95 18 24 0.0016 0.13 13.7 0.6 1 23 1754 1776 1754 1776 0.93 19 24 0.00014 0.011 17.0 0.4 2 23 1864 1886 1863 1886 0.93 20 24 4.4e-07 3.4e-05 24.9 1.4 3 23 1893 1913 1892 1913 0.98 21 24 0.0041 0.32 12.4 0.3 1 23 1931 1953 1931 1954 0.95 22 24 0.45 35 6.0 0.0 1 23 1975 1997 1975 1997 0.97 23 24 0.039 3 9.3 0.6 1 23 2003 2026 2003 2026 0.95 24 24 0.00049 0.038 15.3 0.4 1 23 2034 2057 2034 2057 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTCCCTACCACCAGTTCGGATGACTTGGAACCTCCCATCCTCGCCTCAAGAATAAAGGATTGTGTGTCTGTACAGATAAACGAAAATGACGAGCTGCCGACAAATGTCTGCAGGAAATGCGTGGATAATGTCAACAACTGGCATTTATTCAAGACAGTATGTGCAAAGGCACAAAACAAACTACTGTCTCTCATTAGAAAGGATGGAAGCCTACTAGAAGAGGTGCATATCAAAAGTGAACCCTTCTCTGATGAGGCTTATGATGATGGAGTGGTTATTGATGGCTCATACCCTGAAGTTGAGCAGGCTGGTGCTTCGAGTAAGCTCCAGCCAGAAGGTCCACCAATCTTGGCCTCATTAGGCCTCACACCGAGGAGTGACAagAACTGTGTGGATCCTCGAATGGATTGGCTCCGAGTCCATGCAATATTGGATATGATTCAAGAGAGCAATGTTATTGATTCACTCCAATCCATTGAAGAGACTGATATCTTGCATCAATCCGATCATGAGTCTGACACAGAGGCTGAGCTTGTACAAGATCTAGATGATGTTTACATTGATATTAAAAAGGGATATTCCTGTAGAAATAAAAGTGTTCTATTAAAAAATCCTCTCAAAAGCTTAAAATCAAGAGATgctaaaaaactgaaaaaaagaaaactcaATAGCCATACACACTGCGGTTTACCCAAGAATGCTTGGCAGCTTCTCTTTACGGATGATCTCCTCGATATTGTTGTCTCAGCGACAAACGAAAATATTCGCCGACATGGGAAAAGCTTCGAAAGTTCCACAAATGTTGGTGAAATCAAATCTCTAATTGGAATTTTATACTTGAATGGTATAATGAGGCCAACTCATCAGAAATGCAGTGACCTCTGGGACAAAGACTGCGGCGTCCCGTCCGTTATGAACGCAATGACATACGATCGTTTCAACTTTCTTTTACAAAACATCTGTTTCTATAGCCAAGATGATGACGACAGCATAATGCAGTTTGATTCGATGAAGCGAATCCGCAAGGTGTTTGAAATCTTCGCCATGAACTGCAGACTAACCTTCGACGTGGAGAGTACCGCCGTCGTTGATGAGATCATCGTCCCAGTTTACGGACCTTGCCCGTTTCGCTACGATATCGATAAGAAACCCCTGAAACGTGGTATTAAAATGGTGTTGTTAGTCGATCCGAGTAATTTCTATGTGAGTAATCTGGACGTTATAACTGATCCTTACTTCGGACCTGAGGAAATTGTTAAACAGATCACTCAGCATTTGTATGGAACTGGGAAAACGATCATAATGGACAGCTGGTACTTTTCCTCCTCCCTGATGGAATCACTGAAAAATTACCAGCTATATACCATAGCTGCGTTGCATCCGAAGTGCAATGATATACCTCCACTATTTTTGTCACATCACAGGAAAAACTGTTCCTTCATTTCTGGATTCATGGATGGTGAAATCTCTGTGACGTCACACGTGAACAAGCAGTCAAAAGCGTCCACTATTGTGTCAAATGAACCAAAATATAATAGGAAGAGCCATACAAAACGCACATCAGTGTCAACTTATAAGAAGAACCAGTCAGCAGTAGAAGTTCTGGATGTCCTGATGCATTATTACACAACATTGCAAAACACAAACGATTGGACTCTTTCATTGTTCTTTACATTGCTTAATATTGCTTCTGTTAATGCTCAAGTTATATGGAGTTCACGGAATAGATCGGTCATTCTAAGGCGTTCATTCATCAGAGACTTGGGGCTAGGTTTGTTAGATGATAAAGGGGTTGAAAGTGAAAAGGATGAGGAAGATgaatatgatgatgaagagaaaATCTCCCAGCCAGTAAAGGTCCCTCATATGCCTGAGGTGTCGATCACCGTGATGCGGCCTACGGGTGAGACGCTGCAATCCCGCCAAGGTATCCAACAGATTGCTTCAAAGGACTGCCTCATCTGCGGCCGCTCTTACAGATACTCCCACAACGCAAGACGACACGAACTCACCTCGCACAAATTCGACCGCTACACcaacaaaataaacaacaaaaaatcacATTCTCGCATGCAACCCAAACTTAGACCAAACCCTTTCAACCCGAAAGCGCGACTTATGCCCAATCCGATCAGCCACAAAATGCAATTGTTACCCAAAATAATGCCCAAATTAATACCCCAATTCAATGCACAATACAATCATTCTCAAATGAACAAAAGAATTATTACTCCACCTAAACCTATACCCATTAAATCATCAAAGACACAGCAGAACAATTTGCCTTATCCTTTGCGCATCAAAGCACTTAAAGATTTGCAAATAAAGAAAAAGGAGCCGcagattttaaaaactttattaacatcTAAACCTGAGGTTCTAGTGTCAGAACCAGAGATTATGAACTCTGGACCTGAGAGTCCTGAGACACTAATATCTGAACCCGAAATTGCATCATTTCAAGTCGAGGCCATTCTTTCGGAGCCTAATGACTATGAAGAAAATCAAGAAGACGAAGAAGGAGATGCAGGAATGCATAATAATCAGAGCCAAAATTATGACACCGTCGATATGGATTCTGAAAATGAAATAGAAATAGCTCGACAACAGGAAAATATGGGTGACCATGAAGAAAATCACGAAGATGACAAGAATCCGCATGATGAAAACAATTTTGACGAAACCGACAAAGTGGGAGAAAATGAGAGTGAAAAAGATCTTAGTCCCCAAGAAGCAGCTCATGGAGAAGGAGACAATGGAAACATGGATATTGACGAAAACGAAGAAGCCAAAGACGATGAACATAATAATGTAGGGGAAGAAGGAAATGAGGAAGCTGAGAACGATGAACTGGATGCAAGTCAAGGGGTTGATGGGAATGATGACGACGAGCCTCGCTCGCCAATCGGACTGACGCCACAGGTTGAATTGAACGAAGATATACACAATTCTAATACATTCAACAGCGAGATGAACGACGAAGAACCAGATGAAAGTGCTGATATCAACGATACTGTCGATGGTGATGCCGAAGCTCTCGATTCTCAGAAAACTTACGTAACCGACTCTCAAAGAGATTTCATCAAGCGATATCGCGATATCATACAACAGATTAACACCAAGAGATGCCTTTGTTGTGATAAAGAGTATCCGCGCAGGAAAGCCGTTATACAACATTTACAGAAAAATGGGCACAAAGTTCCCAAACATACGTGCTATAATTGCGTCGTTACTTTCACCCATATTGGTGCTCTACTCAGCCACATGAGGCAAAACTCTTGTACCGACTTGTGGAAGATTATCTATGACGAGAACGGTATCACCAGCGACATGATCATTGAGGAACCTAAGAGCAAAATACAGGCCAAAGATATTTTTAATGCAAAATCTTATGCCTGTAGATTGTGCCCTGCTAAATTCCAGCTGAAGCAATCTATTATGAAGCATGTTTCTGAGTTCCACGAGGATGGACAGTCTTCAGTTCCTCTCGGGTGCGTCCACTGCGGCGCTTCCTACAAAGATAAAACTTTGCTTAAGAAACATATCCGTAACGGCGAATGTACAGTGTATGTCCATTGCGATTTATGTTCGGAACAATTCACTAACATGCAAGACTTTAACGATCACGCTTTGTCTGTTCACGCTGAGCACTTTGTTAAAACTGAAAATCAGACGATCGATGGTCGACTCTCTGACTGCTATCTTTGTGGAACGAAGACTGGTAGCTATACAAACCTTCTTAAACATTTTAAGGCGATGCACGATCAAATAATACATCACTGCCAGTTTTGTGGTGTTAAATTTGAACAGCCTGTCGATCTAAACAAACACATGTACCTGGAGCATCCTGGCCAAACTCCTGACATGAATGTTACTGAACCAGACATGTCCCTCGTCAAAGAAGAAGCAGAGGAATATCATTACTCTTGCACCGAGTGTAATGCTATATTTGAAACTGTGGACGCATGGACTGATCACCAAGTAGCTGAGCATAACCAAGTGGCGCACCATTGTGACCAATGTGAAAAGAAATTCTTGCGGCCCTCAGAACTAGCAGAGCACAAAAACACTCACTTGAGAGTTAAGTTTTATCCTTGCAGTATTTGCTCTAACTCGTATGCCACTCCGCAAAAGTTGGCCGATCACGTTCAAAACTCTCATCCCGGTGCAGCATCTCAGGTCAACGCAGAAAACGAATTTTTCTGCGATATCTGCATTCGAGCTTTCAAAAGTCGTCAGGCCTACTCTAATCATATGCGCATTCATGCAAAAGTACCAACCACAAACAGAAAGCCTGGGGAACCGAAAGGATTCGATCCCCGCATTATTGGGAAACCCATAAAGCAATTTACAATGTCGAATGTCGTCCAACCTGGATTCATCAACTTCAAGCCAAATGCAAATGTTCCTAACGCTCCTTATTCGTGTGATATATGCGGTAAAGGGTTCAtgcataagaaaaatatttggaaacataaaaaagttttgcATGCCGATATAATAAACGATAGAAATGACAGTGAGGAAAACACCATGCACGCTTCCACCGAAGAAGATGAATATAACATCGATGAAAACGGCGCATTACTTTCAACGCCGCAATTcaacagttttaattttaccaATTTGACTAATAATGTGTTGCAGCCAGATCCTATGCCATTCTCTTGCGAGCTATGCTCTAAGAGATTCCCGCTCAAAACTAGTCTGTGGAAACATAAGCGTGCTAAGCACGGAATTACTAATGCAAATCCAAGCGGAAATATGGAAGCTCAATCGCAGGTAGCCCCCAGTGAAGGGCAAGGTGGAGGTCGATCTAGCTGCACcatttgcaaaataacatttgctgacaaaaaatcttattaTCGCCACAGAAAGAATGTTCACAAATCAGCTACGCAAATGTGCAAGATATGCGGTAAGCCATTGAATTCTACTCAGGAGTTGTATGAACATCTGAAAGCAGCTCACGCTAGAGAGTTGCTCGGGTACAATGCTAATCAGAGTACAAGTAAAGCACAGGAAATGTCACAAGAAATGGAACCTGATTACGACAACGAACTAGATACTGCAGATCCCAGTGTCGATTATCAAGCAAGGTATCCTTGCGATACGTGTGGCAAGCAATTTGTGGGATTGCTATCTTTGCAGAACCATCAGTGTATAAATCAAGCACCTTCGCAACCCCAGACTTTCGATTGTGAAATCTGTCACAAGAGCTACACTTCGATCGCCGCGCTGAAGAGTCATCGAGGGTGGCATCTACGATCCCCTGATGGTAAGGCAGCCGCTAACAATAGTGGTCTCTGGATGCCACAGCACAAAGTTACCAGCAAAGTTAGCAAACATGAAGTTGTAGAACCAGTCGCTCCAGTGGTAGCTCGAAGTCAGTCGTCTCCTGCGACCGTTGCGAAAAGGAGATTACCTCCCGAAGTGGAAGTAACCGTCGTGAATCCAAACAAAAAGATGCGTTCAGATGACTCCGTCGAGCTAGACCAGCAAGGCGATGGTCTGGAGGGGAAGTACTGTACGATATGTGACAAAGAGTTCACAAAACGCGCCGCATATCAACGCCATATGGACGAGGTACATCAGCCAAATTCGGTGTTTTGTCCAGTGTGCGATAAGAGTTTTACGCGAAAATCGACTCTGCTGGTGCACATGAAAAAACACTACGAAGGTGGGGAAGGTTGTTCGACAGCACAAGTGGATGATGAAGAAGGTTTTTCGTGCGATGTCTGCGGTGCGCAATACGATACTGAGAACGCTTTGAGGGCGCATAGGATAAGGCACCACGGAGAAGAGTCAGGGGAATCAGAGGATGATGGACAAGTGCCTATCGCGCAGCCTGGGGAATTCACATGCGGGCAGTGCGGCGACGGTGTCGCCACAGCGCGCGATCTAATCACGCACCGCGCCATACATTCAACGCCAACGAAATTCTTCTGTAATATTTGCAAGGTGTACTTTGTGAGAGCATTGGATCTGTCCTCGCATACGCGAGCGCGACATGCAGACAATGAGAAAGTATTCTTCCCGTGTGCCATGTGCGATCGCTTTTACATGAATAAGAAAAGTTTACAACGACACATCGACATGGCTCACTGA
- Protein Sequence
- MTVNYDRVCRLCLSSRGELLPIFPTTSSDDLEPPILASRIKDCVSVQINENDELPTNVCRKCVDNVNNWHLFKTVCAKAQNKLLSLIRKDGSLLEEVHIKSEPFSDEAYDDGVVIDGSYPEVEQAGASSKLQPEGPPILASLGLTPRSDKNCVDPRMDWLRVHAILDMIQESNVIDSLQSIEETDILHQSDHESDTEAELVQDLDDVYIDIKKGYSCRNKSVLLKNPLKSLKSRDAKKLKKRKLNSHTHCGLPKNAWQLLFTDDLLDIVVSATNENIRRHGKSFESSTNVGEIKSLIGILYLNGIMRPTHQKCSDLWDKDCGVPSVMNAMTYDRFNFLLQNICFYSQDDDDSIMQFDSMKRIRKVFEIFAMNCRLTFDVESTAVVDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDPSNFYVSNLDVITDPYFGPEEIVKQITQHLYGTGKTIIMDSWYFSSSLMESLKNYQLYTIAALHPKCNDIPPLFLSHHRKNCSFISGFMDGEISVTSHVNKQSKASTIVSNEPKYNRKSHTKRTSVSTYKKNQSAVEVLDVLMHYYTTLQNTNDWTLSLFFTLLNIASVNAQVIWSSRNRSVILRRSFIRDLGLGLLDDKGVESEKDEEDEYDDEEKISQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKSHSRMQPKLRPNPFNPKARLMPNPISHKMQLLPKIMPKLIPQFNAQYNHSQMNKRIITPPKPIPIKSSKTQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVEAILSEPNDYEENQEDEEGDAGMHNNQSQNYDTVDMDSENEIEIARQQENMGDHEENHEDDKNPHDENNFDETDKVGENESEKDLSPQEAAHGEGDNGNMDIDENEEAKDDEHNNVGEEGNEEAENDELDASQGVDGNDDDEPRSPIGLTPQVELNEDIHNSNTFNSEMNDEEPDESADINDTVDGDAEALDSQKTYVTDSQRDFIKRYRDIIQQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQNSCTDLWKIIYDENGITSDMIIEEPKSKIQAKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPLGCVHCGASYKDKTLLKKHIRNGECTVYVHCDLCSEQFTNMQDFNDHALSVHAEHFVKTENQTIDGRLSDCYLCGTKTGSYTNLLKHFKAMHDQIIHHCQFCGVKFEQPVDLNKHMYLEHPGQTPDMNVTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYATPQKLADHVQNSHPGAASQVNAENEFFCDICIRAFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTMSNVVQPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNIDENGALLSTPQFNSFNFTNLTNNVLQPDPMPFSCELCSKRFPLKTSLWKHKRAKHGITNANPSGNMEAQSQVAPSEGQGGGRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHARELLGYNANQSTSKAQEMSQEMEPDYDNELDTADPSVDYQARYPCDTCGKQFVGLLSLQNHQCINQAPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVEPVAPVVARSQSSPATVAKRRLPPEVEVTVVNPNKKMRSDDSVELDQQGDGLEGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGCSTAQVDDEEGFSCDVCGAQYDTENALRAHRIRHHGEESGESEDDGQVPIAQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00663313;
- 90% Identity
- -
- 80% Identity
- -