Basic Information

Insect: Xanthorhoe designata
Gene Symbol: -
Assembly: GCA_963582015.1
Location: OY757036.1:9675770-9684608[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0048 0.33 12.1 1.5 3 23 647 668 646 668 0.96

2 23 5 3.5e+02 2.6 1.1 4 23 1024 1045 1022 1045 0.84

3 23 0.078 5.5 8.2 0.6 1 21 1050 1070 1050 1071 0.96

4 23 7.5e-05 0.0052 17.7 0.9 3 21 1145 1163 1145 1164 0.96

5 23 4.9 3.4e+02 2.6 0.5 2 23 1172 1194 1171 1194 0.92

6 23 0.044 3.1 9.0 0.8 3 23 1213 1234 1211 1234 0.92

7 23 0.001 0.071 14.2 1.4 1 23 1239 1262 1239 1262 0.94

8 23 0.15 10 7.4 0.0 1 23 1288 1311 1288 1311 0.90

9 23 0.022 1.6 10.0 3.4 1 23 1316 1338 1316 1338 0.97

10 23 0.0049 0.35 12.0 0.1 1 23 1344 1367 1344 1367 0.95

11 23 0.0064 0.45 11.7 1.6 1 23 1380 1402 1380 1402 0.97

12 23 0.00021 0.015 16.3 1.8 1 23 1454 1477 1454 1477 0.97

13 23 0.003 0.21 12.7 1.4 1 23 1536 1559 1536 1559 0.96

14 23 0.0024 0.17 13.0 1.5 2 23 1591 1613 1590 1613 0.95

15 23 0.42 30 5.9 0.1 2 23 1619 1641 1618 1641 0.92

16 23 0.0078 0.54 11.4 0.3 1 21 1682 1702 1682 1703 0.95

17 23 0.0015 0.1 13.7 0.6 1 23 1713 1735 1713 1735 0.93

18 23 0.00022 0.015 16.3 0.3 2 23 1828 1850 1828 1850 0.93

19 23 3.9e-07 2.8e-05 24.9 1.4 3 23 1857 1877 1856 1877 0.98

20 23 0.0063 0.44 11.7 0.4 1 23 1896 1918 1896 1919 0.95

21 23 0.41 29 6.0 0.0 1 23 1943 1965 1943 1965 0.97

22 23 0.035 2.4 9.3 0.6 1 23 1971 1994 1971 1994 0.95

23 23 0.00044 0.031 15.3 0.4 1 23 2002 2025 2002 2025 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0048	0.33	12.1	1.5	3	23	647	668	646	668	0.96
2	23	5	3.5e+02	2.6	1.1	4	23	1024	1045	1022	1045	0.84
3	23	0.078	5.5	8.2	0.6	1	21	1050	1070	1050	1071	0.96
4	23	7.5e-05	0.0052	17.7	0.9	3	21	1145	1163	1145	1164	0.96
5	23	4.9	3.4e+02	2.6	0.5	2	23	1172	1194	1171	1194	0.92
6	23	0.044	3.1	9.0	0.8	3	23	1213	1234	1211	1234	0.92
7	23	0.001	0.071	14.2	1.4	1	23	1239	1262	1239	1262	0.94
8	23	0.15	10	7.4	0.0	1	23	1288	1311	1288	1311	0.90
9	23	0.022	1.6	10.0	3.4	1	23	1316	1338	1316	1338	0.97
10	23	0.0049	0.35	12.0	0.1	1	23	1344	1367	1344	1367	0.95
11	23	0.0064	0.45	11.7	1.6	1	23	1380	1402	1380	1402	0.97
12	23	0.00021	0.015	16.3	1.8	1	23	1454	1477	1454	1477	0.97
13	23	0.003	0.21	12.7	1.4	1	23	1536	1559	1536	1559	0.96
14	23	0.0024	0.17	13.0	1.5	2	23	1591	1613	1590	1613	0.95
15	23	0.42	30	5.9	0.1	2	23	1619	1641	1618	1641	0.92
16	23	0.0078	0.54	11.4	0.3	1	21	1682	1702	1682	1703	0.95
17	23	0.0015	0.1	13.7	0.6	1	23	1713	1735	1713	1735	0.93
18	23	0.00022	0.015	16.3	0.3	2	23	1828	1850	1828	1850	0.93
19	23	3.9e-07	2.8e-05	24.9	1.4	3	23	1857	1877	1856	1877	0.98
20	23	0.0063	0.44	11.7	0.4	1	23	1896	1918	1896	1919	0.95
21	23	0.41	29	6.0	0.0	1	23	1943	1965	1943	1965	0.97
22	23	0.035	2.4	9.3	0.6	1	23	1971	1994	1971	1994	0.95
23	23	0.00044	0.031	15.3	0.4	1	23	2002	2025	2002	2025	0.96

Sequence Information

Coding Sequence: aTGACTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCCCGAGGCGAGTTACTGCCGATTTTCCCTACCACCAGTTCGGATGACATGGAACCACCCATCCTCGCTTCTAAAATAAAGGAATGCGTGTCTGTGGAGATAAACGAAAATGACGACCTGCCAACAAATGTCTGCAGGAAATGCGTGGACAATGTCAACAACTGGCATTTATTCAAGACTGTATGTtcaaaaacacaaaacaaactACTGTCTTTCACAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCATATCAAAAGTGAACCATTTTCTGATGAAGCTTATGATGATGGTGTGGTTATTGATGGCTCATATCCTGAAGCTGAGAATGCCAGCCTTTCAAGCAAGCTGCAGCCTGAAGGGCCCCCAATCCTGGCTTCATTGGGGCTCACACCGAGGAGTGATAAGAAATGTGTGGATCCACGAATGGATTGGCACCGAGTCCATGCAATATTGGACATGGTTCAAGCCAGCGATGTCATTGATTCTCTGCAAAATGTGGAAGAGAGTGATGTTTTACACCATTCCGATCATGAGTCAGACATTGAAGCTGACCTCCAACCAGACCTCGATGATGCATTCATTAATTGTAAAAATGGCTATTTTTGTAagaatgaaaatgttttatttaaaaatccaaAAAAAGACAGCTACGGTCTCAAAGATACTATGAAACTGAAAAAAAGGAACGCCGAGATTGTGCACTGTGGCAAACCTAAAAACGCTTGGCAGTTACTGTTCACTGATGATCTACTCGATCTTATTGTCTCATCGACAAATGAGAATATACTCAGACTTGGCAAGACCATCGAAGGGTGCACCAATGTTGGTGAAATCAAAACTCTTATCGGAATCTTGTACTTGAATGGAATAATGAGGCCAACTCATCAGAAGTGCAGTGATCTGTGGAACTATAAATGCGGCGTCCCGGCTGTTATAAATGCAATGACAAATGAGCGTTTCAAATTTCTCATACAAAATATTCGTTTCTATAGTCAACAAGACGCTGATTGCATAATGCAGTTTGATACCATGAAACGCATTCGCAAAGTATTCGAAATCTTCGCATTGAACTGCAGAACAACCTTCGACGTGGAAAAAGTAGCTGTCGTTGATGAGATCATTGTGCCGGTATATGGACCTTGCCCGTTTCGATACGATATCGGAAAGAAACCACTGAAACGTGGAATAAAAATGATATTACTGGTAGATCCGAATAATTTCTACGTGAGCAACATGGATGTGATTGTGGATCCATATTTCGGAGCTGAGGATATTGTGATAAATATCACTCAACATTTGTACGGGACTGGGAAAACGATTATAATGGATAGTTGGTTCTTTTCTTATCCGTTATTGAAGACACTGAAGAGTTATAAACTTTATACGTTAGCGGCATTGCACCCAAAGAGCGACGACGTACCACCTCTATTCCTATCGAATTACAGAAAAAGTTGTACATATATTTCTGGGTTTCTCGACAATGAAGTCTCGCTCACTTCTCACGTGAACTCACGGTCAAAAGCAACGAACATTGTTACCAACTTGCCGCAATTCTATCGTAAAGGTCACACCACTCGCACTACCTCTGTCTcagcttacaaaaaaaatcaatcagCTGTTCAAGTCCTGGATGTCGTGATGCACTATTATACTACCATGCAACATACAAACGATTGGACAATTTCATTGTTTTGCACATTGCTTAATATCGCCTCAGTCAATGCTCAGGGAGTGGAGAGTGAGAAAGATGAGGAAGAAGAATATGAAGAGGAGGTGAAAACCCCTCAGCCGGTGAAAGTTCCTCATATGCCTGAAGTTTCCATCACTGTGATGCGACCTACTGGTGAGACACTTCATGCCCGCCAAGGTATCCAACAGATCGCCTCCAAAGACTGCCTCATCTGCGGACGCTCTTACAGATACTCACATAATGCAAGGCGACACGAACTCACGTCACACAAATTCGACCGCTACACAAACAagataaacaacaaaaaaacacactCCCACATGCAACCTAAACTCAGACCCAACCCTTTCAACCCGAAAGCGCGACTCATGCCCAATCCGATCAGCCATAAAATGCAGTTGTTACCTAAGATTATACCAAAAATGATTCCTCAAAAGATTATTACCCCACCTAGACCGATACCTATTAAATCATCTAAAACACCGCAGAATAACTTGCCATATCCGTTGCGTATCAAAGCTCTCAAAGATTTgcaaataaaaaagaaagaacCTCAGATTTTGAAGACGTTGCTCACATCTAAACCTGAAGTCTTAGTGTCAGAACCGGAGATTATGAACTCTGGTCCAGAAAGTCCTGAAACCCTGATATCTGAACCAGAGATTGCTTCTTTCCAAGTTGAAACTATACTTTCGGAACCCAACGATTACGATGAAAATCAAGATGATGCTGATGTCGACATGCATAACAATCAGAGCCAAAATTACGACACCGTCGATATGGACTCTGAAAATGAAATAGAAATTGCACGACAACAGGAGAATATTGATGATAACGAAGATAACCACGACGAAGATGACAATCAACAAGATGACGGGAATAACTTTGATGAAGTTGACAAAGCGGGTGAAAATGAAAGTGAGAAAGACCTTAGTCCCCAAAACGCAGGCGTCGATGAAGAAGGCAACAGAGATGCTGACGAAAATGACGAAGCCAAAGATGATGAACAGAATAATGACGATGAAGAAGGAAATGAGGAAGTGGAGAATGAACTCAATGCTACACAGGCGGCtgatgaaaatgatgatgatgatgatccgcCTGTAATAGCGCCAGAAGTCGAGCTCAACGAAGATATGCACAATAACTCTAATACTTTCACTAGCGAGTTAAATGAGGACGAAGACGAACCTGACGAAAGCGCTGACCTCAATGACACAGCCGATGGTGAACAGAAAGCACTTGGCGCTGAAACAACATACGTCACCAATGCTCAAAGAGACTTCATCAAGAGGTATCGTGACATAATCCTACAGATTAACACTAAGAGATGCCTGTGTTGCGATAAAGAGTATCCACGCAGAAAAGCTGTTATCCAACATCTCCAGAAAAACGGGCACAAAGTTCCGAAGCATACATGCTACAATTGTGTTGTTACTTTCACCCACATTGGCGCTCTACTTAGCCACATGAGACAGAGCTCTTGCACCGATCTGTGGAAGATTATTTATGACGAGAACGGTATAACCAGTGAAATGGTCGTTGAAGAACCCAAGAGCAAAATTCAAGCCAAAGACATTTTCAACGCTAAATCTTACGCATGCAGGCTATGTACTGCTAAATTCCAGCTAAAACAATCAATAATGAAACACGTTTCTGAGTTCCATGAAGATGGCCAGTCTTCAGTGCCCTTAGGCTGCGTTCATTGCGGAGCCTCTTTCAAAGATAAGTCTTTGTTGAAGAAACATATCCGAAACGGCGAGTGCACAGTTTACATCCATTGTGATCTTTGTTCTGAACAATTTACCCTCATGCAAGAGTTCAATGATCATGCGTTGTCCGTTCACGCTGAGCACTTTGTCAAAAATGAAAACCAAGCCGTTGACGGACGACTCACAGACTGCTATCTTTGTGGGACGAAAACTACTAGCTACTATAATCTTCTAAAACATTTCAAAGCGGTGCACGATGAAATCCCACATCAATGCCAGTTCTGTAATGTCAAGTTTGAGCAGCCTGTTGATCTTAACAAGCACATGTATCTCGAACATCCAGGGCAAACTCCTGATATGCAATCGTCTGAGCCAGACATGTCTTTAGTGAAAGAAGAAGCTGAGGAATACCACTATTCTTGCACAGAGTGCAATGCGATATTCGAAACTGTCGATGCATGGACAGACCACCAAGTGGCTGAACATAATCAAGTGGCTCATCACTGCGACCAGTGCGAAAAGAAGTTCTTGCGGCCTTCAGAGCTAGCAGAGCACAAGAACACTCACTTGAGAGTAAAATTCTATCCATGCAGCATTTGCCCTAATTCATACAGTACCCCACAGAAACTATCAGATCACGTCCAGAACGTACATCCTGGCGCAGCATCTCAGGTCAACTCTGACAATGACTTTTTTTGCGAGATTTGTATTCGTCGTTTCAAAAGTCGCCAGGCTTATTCGAATCATATGCGCATTCATGCCAAAGTGCCGACCACTAACAGAAAACCTGGTGAACCTAAAGGATTTGATCCACGAATCATTGGTAAACCCATCAAGCAGTTCACTATTTCCAATGTTGTTCCACCTGGATTCATCAACTTCAAGCCAAATGCTAATGTTCCTAATGCTCCTTATTCATGTGATATTTGTGGCAAAGGTTTCATGCACAAGAAAAATATTTGGAAGCACAAAAAAGTATTGCATGCCGATATAATAAACGACAGAAACGATAGTGAGGAAAACACAATGCATGCCTCTACTGAAGAAGATGAGTATAATGTTGATGAAAATGGTTCAATACTGTCGACGCCACAATTTaacagttttaattttacaaatttcAATAATACGATACAGCCTCAGGCAGATCCGATGCCTTTTTCATGTGAATTATGTTCCAAACGATTCCCACTTAGAACCAGTCTCTGGAAGCACAAACGCGCTAAACACGGAATCACAAATGCAAATCCCAGCGGAAGTAGCGCGGGTTCCCAGGCCGCAAGTGACGGGACGCCCAGCGAGAACCCAGCCGGGAGTCGCTCCAGCTGTACTATTTGCAAAATAACTTTTGCTGACAAAAAGTCTTACTATCGTCACAGGAAGAATGTCCACAAATCGGCAACTCAAATGTGCAAGATTTGTGGCAAGCCATGGAACTCCACTCAAGAACTGTACGAACATTTGAAAGCAGCTCACGCTCGAGAACTATTAGGGTATAATGACAACCAAAGTACGAGTAAAATGCAGGAACCAGATGTGGATGATTTCGACAACGAACCGGATAGTGGAGACCCTAGCGTTGAATATCAAGCACGATACCCGTGCGATACCTGTGGCAAACAGTTTGTGGGACTGCTTTCGTTACAAAATCACCAGTGCATCAACCAAGTACCTTCACAGCCTCAGACATTTGATTGTGAGATTTGCCACAAAAGCTACACATCCATAGCCGCGTTAAAAAGCCATCGCGGCTGGCATCTTCGATCGCCCGACGGCAAGGCGGCCGCCAACAATAGCGGGCTCTGGATGCCTCAGCACAAGGTAACCAGCAAGATCAGCAAACATGAGGTCGTGGAATCGATCGCGCCTGCTGCGTCGACGTCATCAGTTGTAACACGACTTAGTTCGAATCCGGCGGCTGCAGCCAAAAGAAGGCTTCCCCCTGAAGTTGAAGTGACCGTCGTGAATCCTAACAAAAAGATGCGCTCGGACGATTCCGGCGAGACAGATCAGAACGACGGCTCTGAAGGAAGGTATTGCACAATATGCGACAAAGATTTCACGAAACGCGCAGCGTATCAACGCCACATGGACGAAGTCCATCAGCCAAATTCCGTGTTTTGTCCGGTCTGTGATAAGAGTTTTACAAGGAAATCCACTTTGCTCGTGCACATGAAGAAGCACTACGAGGGTGGCGAGGGTAGTTCCTCAACAGCGCAGGTTGACGAAGATGAAGGCTTTTCATGTGACCTTTGCGGAGCGCAGTACGATACAGAGAACGCATTGAGAGCGCATCGAATCAGGCATCATGGGGAGGAGTCTGGGGATGATGAGGACGAAGAAGATGATGGCCAGGTTCCTATTGCACAGCCTGGGGAGTTCACTTGCGGCCAGTGCGGAGACGGTGTGGCTACAGCCCGTGATCTAATCACGCATCGCGCCATACATTCAACACCTACCAAATTCTTCTGCAACATTTGCAAAGTGTACTTCGTGAGAGCGTTGGATTTATCTTCACACACCCGAGCGCGACACGCGGATAATGAGAAAGTGTTTTTTCCATGCGCCATGTGTGATCGCTTTTACATGAATAAAAAGAGCTTGCAACGACACATTGATATGGCCCACTGA
Protein Sequence: MTVNYDRVCRLCLSSRGELLPIFPTTSSDDMEPPILASKIKECVSVEINENDDLPTNVCRKCVDNVNNWHLFKTVCSKTQNKLLSFTRKDGSLLEEVHIKSEPFSDEAYDDGVVIDGSYPEAENASLSSKLQPEGPPILASLGLTPRSDKKCVDPRMDWHRVHAILDMVQASDVIDSLQNVEESDVLHHSDHESDIEADLQPDLDDAFINCKNGYFCKNENVLFKNPKKDSYGLKDTMKLKKRNAEIVHCGKPKNAWQLLFTDDLLDLIVSSTNENILRLGKTIEGCTNVGEIKTLIGILYLNGIMRPTHQKCSDLWNYKCGVPAVINAMTNERFKFLIQNIRFYSQQDADCIMQFDTMKRIRKVFEIFALNCRTTFDVEKVAVVDEIIVPVYGPCPFRYDIGKKPLKRGIKMILLVDPNNFYVSNMDVIVDPYFGAEDIVINITQHLYGTGKTIIMDSWFFSYPLLKTLKSYKLYTLAALHPKSDDVPPLFLSNYRKSCTYISGFLDNEVSLTSHVNSRSKATNIVTNLPQFYRKGHTTRTTSVSAYKKNQSAVQVLDVVMHYYTTMQHTNDWTISLFCTLLNIASVNAQGVESEKDEEEEYEEEVKTPQPVKVPHMPEVSITVMRPTGETLHARQGIQQIASKDCLICGRSYRYSHNARRHELTSHKFDRYTNKINNKKTHSHMQPKLRPNPFNPKARLMPNPISHKMQLLPKIIPKMIPQKIITPPRPIPIKSSKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYDENQDDADVDMHNNQSQNYDTVDMDSENEIEIARQQENIDDNEDNHDEDDNQQDDGNNFDEVDKAGENESEKDLSPQNAGVDEEGNRDADENDEAKDDEQNNDDEEGNEEVENELNATQAADENDDDDDPPVIAPEVELNEDMHNNSNTFTSELNEDEDEPDESADLNDTADGEQKALGAETTYVTNAQRDFIKRYRDIILQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRQSSCTDLWKIIYDENGITSEMVVEEPKSKIQAKDIFNAKSYACRLCTAKFQLKQSIMKHVSEFHEDGQSSVPLGCVHCGASFKDKSLLKKHIRNGECTVYIHCDLCSEQFTLMQEFNDHALSVHAEHFVKNENQAVDGRLTDCYLCGTKTTSYYNLLKHFKAVHDEIPHQCQFCNVKFEQPVDLNKHMYLEHPGQTPDMQSSEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICPNSYSTPQKLSDHVQNVHPGAASQVNSDNDFFCEICIRRFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFDPRIIGKPIKQFTISNVVPPGFINFKPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDEYNVDENGSILSTPQFNSFNFTNFNNTIQPQADPMPFSCELCSKRFPLRTSLWKHKRAKHGITNANPSGSSAGSQAASDGTPSENPAGSRSSCTICKITFADKKSYYRHRKNVHKSATQMCKICGKPWNSTQELYEHLKAAHARELLGYNDNQSTSKMQEPDVDDFDNEPDSGDPSVEYQARYPCDTCGKQFVGLLSLQNHQCINQVPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVVESIAPAASTSSVVTRLSSNPAAAAKRRLPPEVEVTVVNPNKKMRSDDSGETDQNDGSEGRYCTICDKDFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSTAQVDEDEGFSCDLCGAQYDTENALRAHRIRHHGEESGDDEDEEDDGQVPIAQPGEFTCGQCGDGVATARDLITHRAIHSTPTKFFCNICKVYFVRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00663313;
90% Identity: iTF_00267412;
80% Identity: -