Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_963855885.1
Location
OY979649.1:10304712-10326949[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-24 5.1e-21 75.5 0.0 2 89 101 184 100 184 0.93

Sequence Information

Coding Sequence
atgggaaaatgtGACGAAGCCAATGTCGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCtgataattttacattcacCGTGCCCCCGGAGGCTCCCGTCTTCGAGCCTACGCCCGAAGAGTTCCTGGACCCCCTGGCGTACATCAGCAAAATACGACCCATCGCCGAGAAGTCGGGGATCTGCAAGATAAAACCCCCCGCGCATTGGCAACCACCATTCGCAGTGGACGTGGACAGACTACGATTCACTCCGAGGATACAACGACTCAATGAGTTAGAGgCTATAACCCGGGTGAAGCTGAACTTCCTTGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTGCTGAAGATACCCACAGTTGAGAGGAAACCACTGGACTTGTATGCTCTGCACAAAATTGTCAAAGAAGCAGGGGGCTTCGAAGTATGTTCAGCGGAGCGCAAGTGGTCGAAGATCGCGCGGCGCATGGGCCACCCGCAGGGCAAGGGGATCGGCTCCATCCTGAAGAACCACTACGAACGGATGCTGTACCCCTACGACGTGTTCAAGAGCAGCGGCGCGGTCGCTGCGGGGGACAACAAGGAGACGAAGGTGGAAGTGAAATGCGAACAAACGCCAGAAAAAGCGGGGCGAAGGTCGAGCAAGCCGCCGGCGCAGACCCCGCCGCCCGCGCGTCGCTACAAGAGCTCGGAGCCTGAGGCCGCCGAGGGCAGCCACACGGAGGGCGCTCTGCCCTCCACCGACACCGCTGTGCCGGAGAAGAAGACTCCGATAAAGGAGGAACCTGGAGAGACTAGAAGGAGTCCCCGCGAGAACAAATGGATGTCGCAGGCGGGCagctgcggcgcgcgcgcccgcgTGCTGCGCTCCACGCGCCTGCGCGAGCACCGCCTCAGCAACATGACGGTGTCCGtcacgcccgcgccgcccgccgctaCGCCGCTGCACCCCGACGACCCGCTCGCCAAGTACATGTGCCACGTGTGCGGGCGGGGCGACATCGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTCGCCGACGTGCCCAAGGGCGACTGGCGCTGCCCCGTGTGCCTCGCTGAGGAGGTGTCAAAACCAACGGAGGCGTTTGGCTTCGAGCAAGCCAGCAGGGAGTACACGCTGCAGCAGTTCGGGGAGATGGCCGACCAGTTCAAGTCGGATTACTTCAATATGCCGGTACATATGGTGCCGACGTCGACGGTGGAGCGCGAGTTCTGGCGCGTGGTGTCGTCCATCGACGAGGACGTGACGGTGGAGTACGGCGCGGACCTGCACTCCATGGACCACGGCTCCGGGTTCCCGACCAAGTCCAGCGCGCACCTGTACCCCGGCGAGCAGCAGTACGCCGACTCGCACTGGAACCTGAACAACCTGCCCGTGCTCGAGGGCTCCGTGCTGGGGCACATCAATGCTGACATATCCGGCATGAAGATTCCGTGGCTGTACGTGGGCATGTGCTTCGCGACGTTTTGCTGGCACAACGAAGACCACTGGAGCTACTCCATCAACTACCTGCACTGGGGCGAACCCAAGACCTGGTACGGCGTGCCGAGCTCAAAAGCGGAGCAGTTCGAGGCGGCGATGAAAGCCGAAGCGCCCGAGCTGTTCCAGCTGCAGCCGGACCTGCTCCACCAGCTGGTCACCATCATGAACCCCAACGTGCTGATGAAGGCGGGAGTGCCGGTCTACAGgACGGACCAGCACGCCGGCGAGTTCGTGATCACGTTCCCGCGCGCGTATCACGCCGGCTTCAATCAGGGCTACAACTTCGCGGAGGCCGTCAACTTCACACCAGCAGACTGGCTGAAAATGGGCCGCGAATGCATCGCACACTACTCGACACTGCGTCGATACTGCGTGTTCTCGCACGACGAGCTGGTGTGCAAAATGGCACTAGAGGCGGACTCGCTGAGCCTGACCGTGGCGCTGGCCGCCTACCGCGACATGAGGACCATGCTGCACGACGAGAGGAAGCTGAGGAAGTCGCTGCTCGACTGGGGCGTGACGGAGGCGGAGCGTGAGGCGTTCGAACTGCTGCCGGACGACGAGCGCCAGTGCCGCGAGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCGCGTGCACCGCGCAGGTGGCGTGCCTGCGCCACTACGACCAGCTGTGCGACTGTGCGCCGGCGCAGCACAAGCTAAGATACCGCTACACTCTGGACGAGCTGCCCGCGATGCTCAAGAAGCTGAAGCGCAAATCGGAGCTGTTCCGCGAGTGGGCGGAGGCGGTGCAGAACGCGCTCGACCCCGACACGCCCAAGACCTGCGACCTGGACGGCCTGAGGGCGCATCTGAAGAGGGCACACGACCTCAAGATGCACAAGACggagctggtgcgcgcgctAGAGACGGCGATTGAGGACGCGGAGAAGTGCGCCAGCGTGATCCAGCAGCTGGACCTCAACAAgatgcgcacgcgcacgcgccacCACGACCCCAAGTACCGCCTCACCGTGCACGAGCTCACGCTCTTCGCCGCAGAGATCGACGGCCTGGCGTGCGTGCTGCCCGAAGGTTCGGCAGTAAAGGAGGTGCTTCGACAAACAGCGGAGTTCGAAGACAGAGCGACGGATTTACTGAACAGAGACATAGAGGACTGTGACTCTGCGTCAGTCAGGGAACTTGAAGAGGTGGTAGACCTCGGTTCTCGACTTTGCATCGTCCTGCCGCAATTGTCAGCGCTGCAGGCGCGTCTGCAGCAGGAGAAGTTCATAGTGTCAGTGCACACGCACAAGGAAGACTGCAGCACACTAACGCCTGAGGTCATCGACAAATTGCTGACGGAGAGCGAGAGTGTGGTGCCGCATCGGCGCGTCGAGGCCGAGCGCGCGTCGCTGTACAAGCTGAAGCTCCAAGTGGAAGACTGGGAGCGACGCGCGCGCGCCATCCTCACCGACGCGTCGGCTCCGAAGCGGCGCGAGTCCGTGGACAGCGCGACGGAGGAGCACACGACGCTCACGGagctggacgcgctgctggccgAGGGCGACGAGATCGAGGCCGCGCTGCCGTCGCACCACGCGCTGCACACGGCGACCGCGCACGCGAAGGACTGGCTCGCTAAAGTGGAAGAGATGCAGTCAAAAGAGCTGTACCCGTACATGCACAGCGTGGAGGCGCTGTCGCGGCGCGGAGCCAGCATCCCGCTGCCGCTGCTGGAGAAGCAGCAGCTGTCCACCGCGCTGCAGTCCGCCAAGGACTGGCAGAGGGGCGCGGCCGACATGTTCCTCAAGAAGAACTGGCCGTACTCGCTGCTGGAAGCGCTGTCGCCGCGCACGGAGTTCGGCAGCGcgacgcggcggcgcgggcgcggggagGCGCCCTCCCTGGAGGGGGGGCTGCTCAAGCACTTCAGCGAGGACGCCACGCCCACCGAGATCGTGGCCGCCTTCAAGCAGGCCGAGCAGCGGGAACTAGCCGCTATCAAGGAGTTGAGGGCCCGCAACCTGCGCAAGGAGgtgcgcgcgccgcccgcggcCGGCGTCACGTTCTGCGTGTGCCAGAAGCGGCAGTACGGCGTCATGTCGCAGTGCGAGCTGTGCAAGGATTGGTTCCACGCGAGTTGCGTGTCGTCGGCGCGGGAGGAGCCGGACGAGCGCTCGGAGTCCCCGGAGCGCGTGGAGCTGCCCTTCCCGTGCACGGAGAGCAAGTTCCTGTGCCCCGACTGCACGCGCACCAAGCGGCCGCGCCTGCACCGGATACTGGCGCTGTTGGTGTGGCTCCAAAAGCTGCCGGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCGATGGCGTGGCAGGACGCGGCGCGCGCCATGCTCGGCAGCCcgctgctggccgcgctgcCCGCGCACCGGCCCCCGCAGAGCGACAGGAAGGACTCGCACGGACGGTGA
Protein Sequence
MGKCDEANVEVNMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERMLYPYDVFKSSGAVAAGDNKETKVEVKCEQTPEKAGRRSSKPPAQTPPPARRYKSSEPEAAEGSHTEGALPSTDTAVPEKKTPIKEEPGETRRSPRENKWMSQAGSCGARARVLRSTRLREHRLSNMTVSVTPAPPAATPLHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSHWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKSLLDWGVTEAEREAFELLPDDERQCRECKTTCFLSCVTCACTAQVACLRHYDQLCDCAPAQHKLRYRYTLDELPAMLKKLKRKSELFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTVHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDRATDLLNRDIEDCDSASVRELEEVVDLGSRLCIVLPQLSALQARLQQEKFIVSVHTHKEDCSTLTPEVIDKLLTESESVVPHRRVEAERASLYKLKLQVEDWERRARAILTDASAPKRRESVDSATEEHTTLTELDALLAEGDEIEAALPSHHALHTATAHAKDWLAKVEEMQSKELYPYMHSVEALSRRGASIPLPLLEKQQLSTALQSAKDWQRGAADMFLKKNWPYSLLEALSPRTEFGSATRRRGRGEAPSLEGGLLKHFSEDATPTEIVAAFKQAEQRELAAIKELRARNLRKEVRAPPAAGVTFCVCQKRQYGVMSQCELCKDWFHASCVSSAREEPDERSESPERVELPFPCTESKFLCPDCTRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARAMLGSPLLAALPAHRPPQSDRKDSHGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00723750; iTF_00695259; iTF_00021121; iTF_00418753; iTF_00819841; iTF_01124385; iTF_01491657; iTF_01377250; iTF_00647779; iTF_00000964; iTF_00000097; iTF_00197156; iTF_00355908; iTF_00744388; iTF_00790980; iTF_01072228; iTF_01317060; iTF_00112294; iTF_01312023; iTF_00926373; iTF_00032688; iTF_00895703; iTF_00994149; iTF_01166370; iTF_01090467; iTF_00806471; iTF_00462153; iTF_01501866; iTF_01172111; iTF_00318672; iTF_00077269; iTF_00026623; iTF_00282048; iTF_01332325; iTF_00781606; iTF_00780050; iTF_00775844; iTF_00775046; iTF_00774293; iTF_00782422; iTF_00887206; iTF_01062534; iTF_00186919; iTF_00677319; iTF_00888973; iTF_00785800; iTF_00935464; iTF_01147208; iTF_01331208; iTF_01333509; iTF_01334536; iTF_01532808; iTF_00076233; iTF_00408178; iTF_00859241; iTF_01082217; iTF_01487497; iTF_01561801; iTF_00421130; iTF_00896554; iTF_00925514; iTF_00457794; iTF_01506949; iTF_01507846; iTF_00824488; iTF_01078856; iTF_01020971; iTF_01506123; iTF_00954189; iTF_00801583; iTF_01017519; iTF_00204913; iTF_00786548; iTF_00843285; iTF_00953302; iTF_01079674; iTF_01018363; iTF_01151006; iTF_01080512; iTF_00984810; iTF_00621003; iTF_00722817; iTF_00247824; iTF_00246965; iTF_00159615; iTF_00457031; iTF_00709963; iTF_00907659; iTF_00809836; iTF_00273391; iTF_00808881; iTF_00274228; iTF_00840108; iTF_01526796; iTF_01525710; iTF_00037557; iTF_00121175; iTF_00757918; iTF_01440768; iTF_00826605; iTF_01202253; iTF_01204648; iTF_01206313; iTF_01205485; iTF_01203823; iTF_01203026; iTF_00878649; iTF_00642125; iTF_00236430; iTF_00235656; iTF_00428782; iTF_00427875; iTF_01358670; iTF_00213199; iTF_00419567; iTF_00687695; iTF_00957743; iTF_00171536; iTF_00237246; iTF_00913392; iTF_01140720; iTF_01149357; iTF_01140016; iTF_01142194; iTF_01138746; iTF_01147888; iTF_00818929; iTF_01500881; iTF_00844097; iTF_01336606; iTF_00194962; iTF_00205842; iTF_00275026; iTF_01282002; iTF_00074259; iTF_00156979; iTF_01192403; iTF_01220435; iTF_01429715; iTF_00155092; iTF_00156035; iTF_00432916; iTF_00825364; iTF_01259860; iTF_00072501; iTF_00124949; iTF_00827766; iTF_00858326; iTF_00928438; iTF_01302070; iTF_00011722; iTF_00012715; iTF_00301880; iTF_00071193; iTF_00206777; iTF_00780825; iTF_01339737; iTF_00114714; iTF_00404474; iTF_01362874; iTF_00123131; iTF_00142875; iTF_00683105; iTF_00674091; iTF_00043260; iTF_00850373; iTF_00040574; iTF_00204155; iTF_01495565; iTF_01115496; iTF_01494101; iTF_00249497; iTF_01494843; iTF_01141434; iTF_01402527; iTF_00685211; iTF_01145083; iTF_01148615; iTF_01338267; iTF_01116949; iTF_01118038; iTF_01064412; iTF_00207645; iTF_00403549; iTF_00288642; iTF_00164104; iTF_01247862; iTF_00934519; iTF_01217276; iTF_00425149; iTF_00875933; iTF_00875084; iTF_00874232; iTF_00947677; iTF_01061661; iTF_00035422; iTF_00284308; iTF_00034488; iTF_00341118; iTF_00358302; iTF_00357199; iTF_01193395; iTF_00667134; iTF_00745406; iTF_00842430; iTF_00959949; iTF_01034315; iTF_00461337; iTF_00959193; iTF_01033502; iTF_01279967; iTF_00622592; iTF_01531744;
90% Identity
-
80% Identity
-