Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029286595.1
Location
JAGSMS010000023.1:594703-625378[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.1e-24 9.3e-21 74.2 0.0 2 89 101 184 100 184 0.93
2 2 7.3 1.7e+04 -3.5 0.0 45 66 1302 1326 1290 1342 0.66

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTCACCTTCACCGTACCTCCGGAGGCACCTGTCTTCGAGCCAACGCCTGAAGAGTTCCTGGACCCACTGGCGTACATTAGTAAAATAAGGCCAATCGCTGAGAAGTCGGGGATTTGTAAGATAAAACCCCCCGCACACTGGCAGCCACCGTTTGCTGTGGATGTGGATAGACTACGGTTCACACCTAGGATACAGCGGTTAAATGAGTTGGAGGCAATAACTCGCGTGAAGCTGAACTTCTTGGACCAGATTATTAAGTTCTGGGAGCTGCAGGGCTCCGTCCTCAAGATACCAACCGTCGAACGGAAGCACTTGGACCTATATGCGCTGCATAAAATTGTCAGAGAAGCAGGTGGTTTTGAAGTGTGCTCAGCGGAGCGCAAATGGTCCAAGATCGCGAGGCGCATGGGCCACCCGCAGGGGAAAGGCATCGGCTCCATCCTAAAGAGCCACTACGAACGTATCCTGTATCCGTACGACGTGTTCAAGAGCAGCGGCGCTGTGGGAGATGGCAAAGAAACTGAGATCAAGATCAAGGTCAAGATCGAACAGACTCCGGAGAAGGCGACGGTGGGCCGTAGTCGGTCGGCGAGCAAGTGCCCAGCGGGCGCGGCCGCGACCCCCCCGTCCACGCCAGCCCCCGCGCCGGCCTCCACGCCCGCGCGCCGCTACAAGAGCTCGGAGCCCGAGCCCGCAGCCGAGGGCAGCCACACCGAGGGCGCGCTGCCCGGCGCCGACGCGGACCGCAAGCTGCGCACCCCTGTCAAGGAGGAGAGCGCCGAGACCAGGCGGAGCCCCCGCGAGAACAAGTGGATGTCCGGAGCGGGCAGCTGCGGCGTGGTGCGGTCGCGGCGGCTGCGCGAGCACCGGCTCAGCAACATGACGGTGTCCGTgacgcccgcgcccgcgccgccgccgcccgccgcgcacAACCCCGACGACCCGCTCGCCAAGTACATGTGCCACGTGTGCGGGCGCGGCGACGTGGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCCTATCACACGTTCTGCCTCGTGCCCCCGCTGGCCGACGTGCCCAAAGGCGACTGGCGGTGCCCCGTTTGCCTCGCCGAGGCGGTGTCGAAGCCAGCCGAAGCGTTCGGCTTCGAACAGGCGTCTCGTGAATACACTTTGCAGCAGTTTGGTGAAATGGCCGATCAATTCAAGTCCGATTACTTCAACATGCCCGTTCACATGGTACCAACGTCAACGGTGGAGCGCGAGTTCTGGCGCGTTGTGTCCTCGATCGATGAAGACGTTACAGTGGAGTACGGAGCAGACCTGCATTCGATGGACCATGGATCCGGCTTCCCTACAAAAATGAGTGCACATCTGTATCCCGGCGAGCAGCAGTACGCCGAATCGAGCTGGAATCTCAACAACCTGCCTGTGCTCGAAGGCTCCGTGCTAGGACATATCAATGCGGACATATCCGGGATGAAGGTGCCTTGGCTATACGTCGGCATGTGCTTCGCGACATTCTGCTGGCACAACGAGGACCATTGGAGCTACTCCATCAACTACCTGCACTGGGGCGAACCGAAGACATGGTACGGCGTACCCGGCACCAAAGCGGAGCAGTTCGAAGCGGCCATGAAATCCGAAGCACCGGAACTATTCCAGTTGCAACCGGACCTGCTGCATCAACTAGTGACCATTATGAACCCCAACATACTGATGAAGGCCGGAGTGCCCGTTTATAGGACCGACCAACACGCGGGCGAGTTTGTGATCACGTTCCCGCGCGCGTATCACGCCGGCTTCAATCAGGGATACAACTTCGCGGAGGCGGTCAACTTTACACCGGCCGATTGGCTGAAGATGGGCCGCGAGTGCATCGCTCACTACTCCACGCTGCGCCGCTACTGCGTGTTCTCGCACGACGAGCTCGTGTGCAAGATGGCGCTGGAGGCCGACACGCTGAGCCTCACCGTGGCGCTGGCCGCGTACAGAGACATGCGGACGATGCTGCACGACGAGCGGAAGCTCAGGAAGGGCCTGCTGGACTGGGGCGTGACGGAGGCCGAGCGGGAGGCGTTCGAGCTGCTGCCGGACGACGAGCGCCAGTGCCAGCTGTGCAAGACCACGTGCTTCCTGTCGTGCGTGACCTGCGCCTGCGCGCCGCACGTGGCCTGCCTGCGCCACTACGCGCGCCTGTGCGCCTGCGCGCCCGCCGCGCACCGCCTGCGATATCGTTATACGTTGGACGAGCTACCGGCTATGTTGGATAAGTTAAAGAAAAAGTCTGAACTGTTCCGCGAGTGGGCCGAGGCCGTTCAGAACGCATTGGATCCCGATACGCCGAAGACCTGCGACTTGGACGGGCTGCGTGCACATTTGCGACGGGCTCACGAGCTTAAGATGCACAAAACGGAGTTAGTCCGAGCCCTGGAAATAGCGATAGAGGACGCCGAGAAGTGCGCGTCAGTGATCCAGCAGTTGGATCTCAACAAGATGCGGACCCGGACCCGTCACCACGACCCCAAGTACCGGCTGACTATCCACGAGCTGACCCTGTTCGCGGCGGAGATCGACGGCCTGGCCTGCGTGCTACCCGAAGGTTCAGCAGTAAAAGAAGTATTGAGACAGACAGAGGAGTTTGAAGATCGCGCAACTGACTTGCTCAGTAAGGACTTGGAAGAAGTAGACACGGCGTCCGTTAGGGAGTTAGAGGAGGTTGTCGAGCTGGGCTCGCGTCTATGCATCGTGTTGCCGCAACTGAGTGCCCTGCAGGCGAGGCTGCAGCAGGCCCGCTGGCTGGACGAAGTTCGTACGCTACGTGAAGACTGCGCTGCGCTAACGCCGCCGGTGTTGGAGCGATTGTTGAAGGACGCTGATTCGGTGTTGCCGCATCGGAAGGTCGAGCAGGAGAGGGCTGCGTTATATAAGCTTAGAGCCCAAGTCGAAGAATGGGAGCAGCGAGCCCAGGCGGTGCTCATCGACAGCCGAGGGGAAGAAACGACCGAGGCTCCGCACACGAGCCTGGCCGAGCTGGACGCGCTGCTGGCGGCCGGCGACGACATCGAGGCGGCGCTGCCCTCGCACCACGCGCTGCACCAGGCCGCGGCGCACACGCGCGACTGGCTCGCGAAGGTCGAAGAGATGCAGTCAAAAGATCTGTATCCATACATGCATAGTGTAGAAAATCTCGTGAAACGCGGGCAGCAAATACCTTTGTCTCTATTCGAAAAGGACCAGCTGGCAGCTGCTTTACAATCTGCGAGGGAGTGGAAAAGGGGAGCAGCTGATATGTTTCTTAAAAAGAATTGGCCGTACAGCCTACTGGAGGCGCTGTCGCCGCGCTCGGAGCAGGCGGCGGCCGCCGGGGGAGCTGGGGGTGCAGCGCGGCGGCGGGGGGCGCGGGACGGCGCGGCGGAGGCGGGGGCGGGGGCCTTCCTGCAGCACTTCAGCGAGGACGCCACGCCCACCGAGATAGTGGCCGCCTTTAAACAGGCGGAGCACCGGGAGCTCGCCGCTATAAAGGAGCTAAGagCTCGTAACATGCGTAAAGAGGTTCGAAGCGCTCCAACGGCCGGACTATCGTTCTGCCTGTGTCAAAAGCGACAGTACGGTGTGATGTCACAATGCGAACTCTGCAAGGATTGGTTCCATGCTTCGTGTGTAGCATCGGCACAAGAGGAACGCGACGACTCGCCAGATCGAGTGGAGCTGCCCTACCCGGTCACAGAGCAGAAGTTCCTGTGCCCGGACTGCATGCGGACCAAACGTCCGAGGCTCCATCGCATACTAGCTCTGTTGGTTTGGCTGCAGAAGTTACCAGTACGGCTAGCAGAGGGTGAAGCTTTACAATGTGTTACGGAACGGGCCATGGCGTGGCAGGATTCTGCCAGAGCTTTGCTGGCAGCGTTACCACACCATCAGCAACAGCCAGAGCATAGGAAGGATAGCATTTCACATGCTTCCAGgTCGTCCGCGAGTGTGGAGCACGCGTACAGTGCCACGCCGAGGTCACCAATCACGAGAGTTACACCTGGATTATTACAAAAGTTAGAAGATCTTATGCTGGAAGGAGATTTACTAGAGGTCCGTCTGGAGGAGCAAGCGCAAGTGTGGAGCGCAGTGGCGACAGTGCGCAGCGCCGAGGGCCGGCGCAGCGGACGTGTGCTAGACGCCGGCCGGCGTAAGCGGCCGCAGCGCGCGCCGCGCCCGCACCGCCAGCTCAAGCGCACGCGTCCGCACCACGGACCCAGCGCAACCAAGACGACAGTGAAACGAGGCTCTGCGACAACgaccaattatttaaataggaaGCAGggGATGTCGTCGGGGTCAGGGCTGATGATGAGGAAGCACTACATGGCGCGGCAGGAGCGGCGTAAACGTGGTCTCGCTGCTTCGACACGTGGGAAACATCCCCGGCAGTCCAGAATTAATCAATCGCGCGGCGCGAGCTCAAGCGCTGCGGGCGGCGGGGGTGCGAGCGGCAGTGCGGGTGCGGGCGGAGGAGCGGCTGCGTGCGCGGGCAGCGGGACGGGCGCCCGACGCGCCGCGGCCGCTCGCCGCAGCAGCTCCTCTTCCTCCGACTCCGCCTCTTCCGACGAGGACTGCGCCGCCGACAACTGTCTGCGGCCCACCGGCAAAGTGGACTGGGTGCAGTGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTGGGGCTGAGTCGCGCCGCGCTCAGGGAAGACGACGACTACGTTTGCGGCGCCTGCGCCAGGGAGCGCCACTGA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKHLDLYALHKIVREAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKSSGAVGDGKETEIKIKVKIEQTPEKATVGRSRSASKCPAGAAATPPSTPAPAPASTPARRYKSSEPEPAAEGSHTEGALPGADADRKLRTPVKEESAETRRSPRENKWMSGAGSCGVVRSRRLREHRLSNMTVSVTPAPAPPPPAAHNPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEAVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKMSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGTKAEQFEAAMKSEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADTLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCQLCKTTCFLSCVTCACAPHVACLRHYARLCACAPAAHRLRYRYTLDELPAMLDKLKKKSELFREWAEAVQNALDPDTPKTCDLDGLRAHLRRAHELKMHKTELVRALEIAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTEEFEDRATDLLSKDLEEVDTASVRELEEVVELGSRLCIVLPQLSALQARLQQARWLDEVRTLREDCAALTPPVLERLLKDADSVLPHRKVEQERAALYKLRAQVEEWEQRAQAVLIDSRGEETTEAPHTSLAELDALLAAGDDIEAALPSHHALHQAAAHTRDWLAKVEEMQSKDLYPYMHSVENLVKRGQQIPLSLFEKDQLAAALQSAREWKRGAADMFLKKNWPYSLLEALSPRSEQAAAAGGAGGAARRRGARDGAAEAGAGAFLQHFSEDATPTEIVAAFKQAEHRELAAIKELRARNMRKEVRSAPTAGLSFCLCQKRQYGVMSQCELCKDWFHASCVASAQEERDDSPDRVELPYPVTEQKFLCPDCMRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDSARALLAALPHHQQQPEHRKDSISHASRSSASVEHAYSATPRSPITRVTPGLLQKLEDLMLEGDLLEVRLEEQAQVWSAVATVRSAEGRRSGRVLDAGRRKRPQRAPRPHRQLKRTRPHHGPSATKTTVKRGSATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLAASTRGKHPRQSRINQSRGASSSAAGGGGASGSAGAGGGAAACAGSGTGARRAAAARRSSSSSSDSASSDEDCAADNCLRPTGKVDWVQCDGGCDQWFHMHCVGLSRAALREDDDYVCGACARERH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
-
80% Identity
-