Basic Information

Gene Symbol
Kdm5
Assembly
GCA_037043105.1
Location
CM073301.1:508709-526853[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-24 3.8e-21 75.7 0.0 2 89 101 184 100 184 0.93

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACATTCACCGTGCCCCCCGAGGCTCCAGTCTTCGAGCCTACGCCTGAAGAGTTCCTAGATCCTTTGGCGTATATCAGCAAAATAAGGCCCATCGCTGAGAAGTCGGGGATATGCAAGATAAAACCACCCGCCCATTGGCAGCCACCGTTCGCAGTAGACGTGGATCGACTGCGTTTCACACCCAGAATACAAAGGCTTAATGAATTAGAGGCTATCACAAGAGTTAAGCTGAATTTCCTCGATCAGATTATCAAGTTCTGGGAGCTTCAGGGTTCCGTTCTCAAGATACCCACAGTTGAACGGAAACCCTTAGATTTGTACGCCTTGCACAAAATCGTTAAAGAAGCTGGTGGTTTCGAAGTATGCTCATCGGAACGGAAATGGTCAAAGATAGCTCGACGGATGGGCCACCCCCAGGGCAAGGGCATCGGATCAATATTAAAGAATCACTACGAGCGCATCCTCTACCCGTATGATGTGTTCAAGAACAGCGGAGCCGTCAGCTGCGCTGGTGACAACAAAGAGACGAAGATCGAAGTGAAAGGCGAACAGACGCCGGAGAAGGCGGGACGGAGGTCGAGCAAGCCCCCGGCGGCGACGCCGCCCCCCGCGCGCCGCTTCAAGAGCTCGGAGCCCGAGGCGGCCGAGGGCAGCCACACGGAGGGCGCGCTGCCCGCCGGCGACGACAAGAAGACCCCCATCAAGGAGGAGCCCGGCGAGACCCGTCGAAGTCCGCGCGAGAACAAGTGGATGTCGGCGGCGGGCAGCTGCGGCGCGCGCGCCCGCGTGCTGCGCTCCACGCGCCTGCGCGAGCACCGCCTCAGCAACATGACCGTGTCCGTcacgcccgcgccgccgccgctgcACCCCGACGACCCCCTCGCGAAGTACATGTGCCACGTGTGCGGGCGCGGCGACATCGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTGGCCGACGTGCCCAAGGGCGACTGGCGCTGCCCCGTGTGCCTCGCCGAGGAGGTGTCCAAGCCGACGGAGGCGTTCGGATTCGAGCAAGCGTCCCGGGAGTACACGCTGCAGCAGTTCGGGGAGATGGCCGATCAGTTTAAATCTGATTACTTCAACATGCCAGTACATATGGTGCCCACGTCGACGGTGGAGCGCGAGTTCTGGCGCGTGGTGTGCTCCATCGACGAGGACGTAACGGTGGAGTACGGCGCCGACCTGCACTCCATGGACCATGGATCCGGATTCCCGACAAAATCCAGTGCACATCTCTATCCCGGTGAACAACAGTACGCGGAATCTAGCTGGAACTTGAACAATTTGCCAGTTCTAGAAGGTTCTGTGCTCGGTCACATCAATGCTGATATATCGGGCATGAAGGTCCCATGGTTGTACGTGGGCATGTGCTTCGCGACGTTCTGCTGGCACAACGAAGACCACTGGAGCTACTCCATCAACTACTTGCACTGGGGCGAACCCAAGACATGGTATGGAGTACCCAGCTCGAAAGCTGAGCAGTTTGAAGCAGCGATGAAGGCTGAGGCACCAGAGCTGTTCCAGTTACAGCCAGATCTGTTGCACCAGCTGGTCACTATCATGAATCCAAATGTCCTCATGAAGGCAGGCGTGCCTGTGTACAGGACGGACCAGCACGCGGGCGAGTTCGTGATCACGTTCCCGCGCGCCTACCACGCGGGCTTCAACCAGGGGTACAACTTCGCCGAGGCGGTCAACTTCACGCCCGCCGATTGGCTTAAAATGGGTCGCGAGTGCATCGCGCACTACTCCACACTGCGGCGATACTGCGTTTTCTCGCACGACGAGCTCGTCTGTAAGATGGCTCTGGAAGCGGACTCGCTCAGCCTCACCGTGGCGTTGGCGGCCTACAGGGATATGAGGACTATGCTGCACGATGAGAGAAAATTGAGGAAATCCCTACTCGATTGGGGCGTCACAGAGGCCGAGCGCGAGGCGTTCGAGCTGCTGCCGGACGACGAGCGACAGTGCCACGAGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCACGTGCACGCCGCACGTCGCGTGTCTGCGCCACCACGACCGCCTGTGTGCGTGCGCACCCGCCGCGCACAAGCTGAGatatCGTTACACTCTCGACGAGCTCCCTGCTATGTTGGAGAAGTTAAAACGCAAGTCAGAGCAGTTCCGCGAGTGGGCGGAGGCCGTCCAGAATGCTCTAGATCCAGACACGCCCAAGACTTGCGATCTGGATGGATTGAGGGCACATCTCAAAAGGGCGCACGATTTGAAGATGCACAAGACCGAGCTGGTGCGCGCGCTGGAGACGGCCATCGAGGACGCGGAGAAGTGCGCGTCCGTGATCCAGCAGCTCGACCTCAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTACCGCCTCTCCATACACGAGCTTACGCTCTTCGCGGCCGAGATCGACGGACTCGCCTGCGTGCTGCCCGAGGGTTCAGCTGTTAAAGAAGTATTACGACAAACCGCGGAATTCGAGGATCGCGCTACTGAGCTGCTGAGTAAGGAGCTCGATGAGTGCGATGCGGCTTCTGTCAGGGAGCTGGAGGAAGTGGTAGATCTCGGGTCTCGTCTCTGCATCGTACTGCCGCAGCTATCGGCGCTGCAAGCACGTCTGCAACAGGAAAAGTTCGTATTGTCCGTGCACACGCACCGCGAGGACTGCTCCACACTCTCGCCCGAACTCATCGACAAGCTGCTGGCTGAGGCCGAGACGGTGGTGCCGCATAGGCGTGTTGAGGCAGAGCGGGCGGCGTTATATAAACTCAAATTACAAGTAGAAGACTGGGAACGTCGCGCACGCGCAGTCCTAATAGACACAAATACACCTAAGAACAGAGAGTCGTTCAGCGATTCGGACGAGCATACCACCCTCGCAGAACTAGACGCATTGCTGGCGGAGGGCGATGAGATCGAGGCCGCCTTGCCGTCCTACCACGCTCTGCACACGGCGACCACGCACGCGAGGGATTGGCTCGCGAAAGTGGAGGAGATGCAGTCCAAGGAGCTGTACCCGTACATGCACAGCGTGGAGGCGCTGTCTCGTCGCGGCGCACAGATCCCGCTGGCGCTGCTGGAGAAGAAACATCTCGCCGCCGCGCTCACCTCCGCACAAGACTGGCAGAGAGGCGCCGCAGACATGTTCCTCAAGAAGAACTGGCAGTGTTCTCTACTGGAAGCGCTGGCTCCGCGCGGTGAAGCGGGGGAGGGCGCGGAGGCAGGCGAGGGAGGCGCGGGGCGCAAACGAGCGCGCGGGGAGCCCCCGGCCGAGGCCGCGCTGCTGCGGCACTTCAGCGAGGACGCCACGCCCACGGAGATCGTGGCCGCCTTCAAGCAGGCCGAGCAGCGCGAGCTGGCCGCCGTCAAGGAGCTAAGAGCCCGCAATATGCGCAAGGAGGTACGAGCTCCACCAACGGCTGGAGTGACGTTCTGTATTTGTCAGAAGCGACAGTATGGAATCATGAATCAGTGCGAATTATGCAAGGACTGGTTCCATGCATCATGCGTGGCGTCCGCTCGTGACGACACAGAGGAGCGCGAGGAATCTCCGGAAAGGATAGAGCTGCCGTTCCCCTGCACCGAGACTAAATTCCTCTGTCCGGACTGCACACGCACGAAGCGACCGCGCTTACATCGGATACTGGCTCTACTGGTGTGGCTGCAGAAGCTGCCCGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACGCGGCGCGCGCGCTGCTGGCCGGCCCGCTGCTGGCCGCGCTGCCCGCGCGCCGCGCGCACGACGCGCCGCGCGAGCGCAAGGACTCGCACGCCAGGTCGTCCGCGAGCGTGGAGCACGCCTACAGCGCCACGCCGCGCGCGCTGGGCGCCGGCGCCCGCGTGCCGCCCGGTCTGCTGCAGAAGCTGGAGGACCTCATGCTCGAGGGAGATCTGCTCGAGGTGCGGCTGTCGGAGCAGGCGTGCGTGTGGAGCGCGGTgtgggcggcgcgcgcggcggaggggcggcgcggcgcgcgcgtgcTGGACGCGGGCCGCCGCAagcgcgcgccgcccgcgcagCGCCACGCCGCGCTCAAGCGGACGCGCCCCGCCAGCGCCGCCAAGACCGCCATGAAGCGGGGCTCCGCCACCACCACCAACTACTTGAATAGGAAGCAGGGCGTATCTTCGGGCTCCGGTCTCATGATGCGCAAGCACTACATGGCGAGACAGGAGCGACGCAAGCGAGCCATCCCCGCGCACCACCACGCGAGGCAGGCGAGAATAGCGGCGCAGGcgcgcgcggcgcgcggcgcggtgCGGCGCAGCAGCTCGTCGTCGCGCTCGTCCgccgacgacgacgacgactgCGCCGCCGCCGCCTGTCTGCGGCCCACAGGCAAGGTCGACTGGGTGCAGTGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTGGGCCTCAACCGCGGCGCGCTGCGGGAGGACGACGAGTACGTGTGCGGCTCGTGCGCCGACGCCAAGCCGCGCGCCGAGCGCCACTGA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSSERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKNSGAVSCAGDNKETKIEVKGEQTPEKAGRRSSKPPAATPPPARRFKSSEPEAAEGSHTEGALPAGDDKKTPIKEEPGETRRSPRENKWMSAAGSCGARARVLRSTRLREHRLSNMTVSVTPAPPPLHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVCSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKSLLDWGVTEAEREAFELLPDDERQCHECKTTCFLSCVTCTCTPHVACLRHHDRLCACAPAAHKLRYRYTLDELPAMLEKLKRKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDRATELLSKELDECDAASVRELEEVVDLGSRLCIVLPQLSALQARLQQEKFVLSVHTHREDCSTLSPELIDKLLAEAETVVPHRRVEAERAALYKLKLQVEDWERRARAVLIDTNTPKNRESFSDSDEHTTLAELDALLAEGDEIEAALPSYHALHTATTHARDWLAKVEEMQSKELYPYMHSVEALSRRGAQIPLALLEKKHLAAALTSAQDWQRGAADMFLKKNWQCSLLEALAPRGEAGEGAEAGEGGAGRKRARGEPPAEAALLRHFSEDATPTEIVAAFKQAEQRELAAVKELRARNMRKEVRAPPTAGVTFCICQKRQYGIMNQCELCKDWFHASCVASARDDTEEREESPERIELPFPCTETKFLCPDCTRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLAGPLLAALPARRAHDAPRERKDSHARSSASVEHAYSATPRALGAGARVPPGLLQKLEDLMLEGDLLEVRLSEQACVWSAVWAARAAEGRRGARVLDAGRRKRAPPAQRHAALKRTRPASAAKTAMKRGSATTTNYLNRKQGVSSGSGLMMRKHYMARQERRKRAIPAHHHARQARIAAQARAARGAVRRSSSSSRSSADDDDDCAAAACLRPTGKVDWVQCDGGCDQWFHMHCVGLNRGALREDDEYVCGSCADAKPRAERH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_01078856;
80% Identity
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