Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029101505.1
Location
JAPJRL010000008.1:9817168-9854835[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.5e-09 1.2e-05 26.3 0.0 43 89 3 46 1 46 0.88
2 2 3.6 9.4e+03 -2.2 0.0 13 56 935 976 923 993 0.70

Sequence Information

Coding Sequence
ATGAGTTTAAGTGGCTTCGAAGTGTGCTCATCGGAGAGGAAATGGTCGAAGATCGCCCGTCGGATGGGCCACCCCCAGGGCAAGGGGATCGGGTCCATCCTCAAGAACCACTACGAGCGGATGCTGTACCCCTACGACGTGTTCAAGAATAGCGGGGCGGTGGGCGCAGCTGCGGATACTAAAGAAACTAAGGTGGAAGTTAAGAGCGAGCAAACGCCCGAAAAAGGTGGTCGTCGGTCGAGCAAGACTCCGGCGCAGACCCCGCCCCCCACTCGCCGGTATAAAAGCTCGGAGCCCGAGGCAGCCGAGGGCAGTCATACAGAAGGCGCCCTACCCTCAACTGACCACGCCATAATTGACAAGAAGACCCCTATCAAGGAGGAGCCCGGGGAGACCAGACGGAGCCCTCGTGAGAACAAGTGGATGTCGCAAGCAGGCAGCTGCGGCGCTCGTGCCCGCGTGCTCCGCTCGACGCGGCTGCGCGAGCACCGCCTCAGCAACATGACAGTGTCGGTGACCCCAGCGCCGCCGCCGCTGCATCCCGACGATCCTCTGGCCAAGTACATGTGCCACGTGTGCGGTCGCGGCGATATCGAGGAGCAGATGCTACTGTGCGACGGCTGCGACGACTCCTACCACACCTTCTGCCTGGTGCCACCGCTGGCCGACGTGCCCAAGGGCGACTGGCGGTGCCCTGTGTGCCTCGCCGAAGAGGTTTCGAAACCGGCGGAGGCTTTCGGCTTCGAGCAGGCGAGTCGCGAGTACACGCTGCAGCAGTTTGGCGAGATGGCCGACCAGTTCAAGTCGGATTACTTCAATATGCCGGTACATATGGTGCCAACGTCGACGGTAGAGCGCGAGTTCTGGCGTGTGGTGTCCTCCATCGACGAGGACGTGACGGTGGAATATGGAGCTGACTTGCATTCCATGGATCATGGATCAGGATTTCCAACAAAATCCAGTGCACATTTGTATCCTGGAGAGCAGCAGTATGCAGATTCCAACTGGAATCTCAACAACCTTCCCGTCCTGGAAGGCTCAGTGTTGGGGCACATCAATGCCGACATATCTGGAATGAAGATACCATGGCTGTACGTGGGCATGTGCTTCGCGACCTTCTGTTGGCACAACGAAGACCACTGGAGTTACTCCATTAATTACCTACATTGGGGGGAGCCCAAAACCTGGTACGGCGTACCGAGTTCAAAAGCTGAACAGTTCGAAGCTGCAATGAAGGCTGAAGCCCCGGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCATCAGTTGGTGACCATCATGAACCCCAACGTGCTCATGAAGGCTGGAGTTCCTGTATATAGGACTGACCAGCACGCTGGCGAGTTCGTGATAACATTCCCCCGGGCATATCACGCGGGCTTCAACCAGGGGTACAACTTTGCAGAGGCCGTCAACTTCACTCCGGCCGACTGGTTGAAAATGGGTCGCGAATGCATCGCCCACTACTCCACGCTGCGGCGGTATTGCGTGTTCTCCCACGACGAGCTCGTGTGTAAGATGGCGCTGGAGGCCGACTCGCTCAGCCTGACCGTGGCGCTGGCGGCCTACAGGGACATGAGGACCATGCTGCACGACGAAAGGAAACTGAGGAAAACACTTCTGGACTGGGGTGTGACGGAAGCGGAGCGGGAGGCTTTCGAGCTGCTTCCCGATGACGAGCGGCAGTGCCACGAGTGCAAGACCACGTGCTTCCTGTCGTGCGTGACGTGTGCGTGCACGACGCAGGTGGCGTGTCTGCGGCACTACGACCGGCTGTGTGCGTGCGCGCCCGCAGCGCACCGCCTGAGGTATCGCTACACTTTAGACGAGCTGCCGGCTATGTTGGAGAAATTGAAACGGAAATCGGAGCAGTTCCGCGAGTGGGCTGAGGCCGTGCAGAACGCACTGGACCCCGACACGCCTAAGACCTGTGACCTGGACGGCTTGCGAGCGCATCTCAAGAGGGCCCACGATCTCAAGATGCACAAAACGGAGCTGGTCCGCGCGTTGGAGACGGCCATCGAGGACGCAGAGAAGTGCGCCAGCGTCATCCAGCAGCTGGACCTGAACAAGATGCGCACTCGCACCCGACACCACGACCCCAAGTACCGCCTCACCATACACGAGCTGACGCTGTTCGCGGCCGAGATCGACGGCCTGGCCTGCGTACTTCCCGAAGGTTCTGCTGTAAAAGAAGTGCTGCGACAAACGGCCGAGTTTGAAGATCGGGCGACTGACCTGCTGAGCAAGGAGTTGGAGGATTGCGACGCTGGGTCGGTCAGGGAATTGGAGGAAGTGGTAGAGCTGGGGTCCCGGCTGTGCATCGTGTTGCCGCAGCTGTCGGCGCTGCAGGCTCGGCTGCAGCAGGAGAGGTTCATAGTGTCAGTGCACTCGCACCGGGAGGACTGCAGTACGCTCACCCCCGACCTCATAGAGCGGCTGCTGGCCGACAGCGAAGCCGTGGTGCCGCACCGCCGCGTGGAGGCCGAGAGGGCCGCCCTCTACAAGTTGAAACTGCAAGTGGAGGACTGGGAGCGTCGGGCGCGTGCGGTGCTGCTCGAAACCGCCGCCCCCAAGGGCAAGGAGCCGGCGGGCAGCGCGGCCGAGGAGCACACCACGCTGACCGAGCTGGACGCGCTGCTCGCCGAGGGGGACGAGATCGAGGCGGCGCTGCCCTCGCACCACGCGCTGCACACCGCCACCGCACACGCCAAGGATTGGCTCACCAAGGTTGAAGAGATGCAGTCCAAGGAGCTGTACCCCTACATGCATAGCGTGGAGGCGCTCTCACGACGCGGAGCCAGCATACCCTTACCCCTGCTTGAGAAGCAGCAGCTGGCGACGGCATTACTCTCCGCCAAGGACTGGCAGAAAGGGGCTGCAGACATGTTCCTCAAAAAGAACTGGCCGTATTCGCTTCTGGAGGCGCTCTCGCCGCGGACGGAGTGTGGAAGCGCGAGCCGGCGGCGTGGCCGGGGCGAAGCACCCTCGCTGGAGGCCGGCCTGCTGAAGCACTTCAGCGAAGATGCCACCCCCACAGAGATCGTGGCCGCGTTCAAACAGGCCGAGCAGAGGGAGCTGGCTGCTATCAAGGAATTGAGGACGCGTAACATGCGTAAGGAGGTGCGTGCGCCGCCCGCTGCCGGCGTCACGTTTTGCGTGTGCCAGAAGCGGCAGTACGGCGTCATGACGCAGTGCGAGCTCTGCAAGGACTGGTTCCACGCGGCGTGCGTGTCGTCGGCGCGGGAAGAGCTGGAGGAGCGGGCGGAGTCCCCGGAGCGGGTCGAGCTGCCGTTCCCGTGCACCGAGACCAAGTTCCTGTGCCCCGACTGCACGCGCACCAAGCGGCCGCGCCTGCACCGCATACTGGCCCTGCTGGTGTGGCTGCAGAAGCTGCCCGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTCACGGAGCGCGCCATGGCGTGGCAGGACGCGGCGCGAGCGCTGCTCGGCAGCCCGCTGCTGGCCACGCTGCCCGCGCACCGCCCGCAGCTCGACCGCAAGGACCACCCGCCACGGTCGTCGGCCAACGTGGAGCACGCGTACAGTGCAACTCCGCGCTCGCCGAGCACGCGGATCGCGCCCGGCCTCATGCAGAAACTGGAGGACCTCATGCTGGAAGGGGATCTCTTGGAGGTGCGGCTTGAGGAGCAGGCGGCGGTGTGGAGCGCGGTGTGGGCGGCTCGCGCGGCGGAAGgccggcgggcggcgcgcgTCCTGGACGCCGGCCGCCGCAAACGGGCCACCACCGCCAAACACCAGCACCAGCTCAAGAGGACCAGGCCGTTGCCGCTGCACAgTACAAACACCACAAAAACCACAATGAAGAGGGGTTCAGCTACTACCACGAATTACTTAAATAGGAAACAGGGCGTATCTTCGGGCTCGGGGCTGATGATGCGGAAGCACTACATGGCGCGGCAGGAACGGCGCAAGCGGGGCCTGCCCAACAGGCATCATCCGCGGCACTCGAGATTAGCCCAAACGCGCGGCGCGCTTTCGGCTGCGGGCGCGCGCGCTGCTGCATTACGCGGCGAGAGCGCGCGACGGAGCAGTTCATCCTCGCACTCCTCAGCAGATGACGACGAGGACTGCGCTGCGTCCTCATGTTTGAGGCCCACAGGTAAAGAGGTGGACTGGGTGCAATGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTGGGCCTTAGCCGAGGTGCCTTACGCGAGGACGATGACTACGTGTGCGGTTCGTGCGCCGAGAGGCCAGCGCGCGCCGCGCCCGCCGGCTGGTAG
Protein Sequence
MSLSGFEVCSSERKWSKIARRMGHPQGKGIGSILKNHYERMLYPYDVFKNSGAVGAAADTKETKVEVKSEQTPEKGGRRSSKTPAQTPPPTRRYKSSEPEAAEGSHTEGALPSTDHAIIDKKTPIKEEPGETRRSPRENKWMSQAGSCGARARVLRSTRLREHRLSNMTVSVTPAPPPLHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSNWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKTLLDWGVTEAEREAFELLPDDERQCHECKTTCFLSCVTCACTTQVACLRHYDRLCACAPAAHRLRYRYTLDELPAMLEKLKRKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDRATDLLSKELEDCDAGSVRELEEVVELGSRLCIVLPQLSALQARLQQERFIVSVHSHREDCSTLTPDLIERLLADSEAVVPHRRVEAERAALYKLKLQVEDWERRARAVLLETAAPKGKEPAGSAAEEHTTLTELDALLAEGDEIEAALPSHHALHTATAHAKDWLTKVEEMQSKELYPYMHSVEALSRRGASIPLPLLEKQQLATALLSAKDWQKGAADMFLKKNWPYSLLEALSPRTECGSASRRRGRGEAPSLEAGLLKHFSEDATPTEIVAAFKQAEQRELAAIKELRTRNMRKEVRAPPAAGVTFCVCQKRQYGVMTQCELCKDWFHAACVSSAREELEERAESPERVELPFPCTETKFLCPDCTRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLGSPLLATLPAHRPQLDRKDHPPRSSANVEHAYSATPRSPSTRIAPGLMQKLEDLMLEGDLLEVRLEEQAAVWSAVWAARAAEGRRAARVLDAGRRKRATTAKHQHQLKRTRPLPLHSTNTTKTTMKRGSATTTNYLNRKQGVSSGSGLMMRKHYMARQERRKRGLPNRHHPRHSRLAQTRGALSAAGARAAALRGESARRSSSSSHSSADDDEDCAASSCLRPTGKEVDWVQCDGGCDQWFHMHCVGLSRGALREDDDYVCGSCAERPARAAPAGW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_01017519;
80% Identity
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