Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029032895.1
Location
JARDWC010000194.1:1169397-1195574[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-24 4.8e-21 75.5 0.0 2 89 101 184 100 184 0.93

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACCTTCACTGTACCTCCGGAGGCACCTGTCTTCGAGCCAACGCCTGAAGAATTCCTGGACCCTCTGGCGTACATCAGCAAAATAAGGCCCATCGCGGAGAAGTCGGGGATTTGTAAGATCAAACCCCCCGCACATTGGCAGCCACCGTTCGCAGTGGACGTAGACAGACTTCGGTTCACACCCAGGATACAACGGTTAAATGAATTAGAGGCCATAACTCGAGTGAAGCTCAACTTCTTGGATCAGATCATAAAATTCTGGGAGCTGCAGGGCTCCGTGCTCAAGATCCCAACTGTGGAGCGGAAGCCGTTGGACCTGTATGCGTTGCATAAAATTGTGAAGGAAGCAGGTGGCTTCGAAGTATGTTCCGCCGAGCGCAAATGGTCAAAGATTGCGCGGCGCATGGGCCATCCGCAGGGCAAAGGCATCGGCTCCATCTTGAAAAGTCACTACGAAAGGATCCTGTACCCATATGACGTGTTCAAGAGTAGTGGTGCAGTCGGAGACAGCAAAGAGACTaaaatcgAAGTTAAAACCGAACATACGCCAGAGAAGGCGGCAGCGGCCACTCGCAGTCGGTCAGCGAGCAAGTGCCCGCCCGCGGCGGCCACCCCGCCGCCCGCCAGGAGGTACAAGAGCTCGGAGCCGGAGCCCGAGGCCGAGGGTAGTCACACGGAAGGCGCGCTGCCCGGAGCCGACGAGGACAGGAAATTGAGGACACCTATTAAAGAAGAAAACCCTGAAACCCGACGGAGCCCCCGCGAGAACAAGTGGATGTCGAGCGCGGGCAGCTGCGGCGTGGTGCGCTCGCGGCGCCTCCGCGAGCACCGCCTCAGCAACATGACCGTCTCCGTGACGCCGGCGCCTGCGCCGCCACCGCCAATGCACAACCCCGATGACCCGCTAGCAAAGTACATGTGCCACGTATGCGGTCGCGGCGACGTGGAGGAGCAGATGTTGCTGTGCGATGGTTGCGATGACTCGTACCACACGTTCTGCCTGGTCCCACCACTCGCCGACGTGCCGAAGGGCGATTGGAGGTGTCCCGTGTGTCTCGCTGAAGAGGTATCTAAGCCGGCGGAGGCGTTCGGCTTCGAGCAAGCAACCAGGGAGTATACCCTGCAGCAGTTCGGTGAAATGGCTGACCAATTCAAATCTGATTACTTTAATATGCCTGTACATATGGTACCCACGTCAACAGTAGAGCGCGAGTTTTGGCGCGTGGTGTCCTCTATTGATGAAGATGTGACAGTGGAGTATGGAGCAGATTTGCATTCAATGGATCATGGATCTGGATTTCCAACAAAGATGAGCGCGCATCTGTATCCTGGGGAGCAGCAGTACGCAGAGTCTAGTTGGAACCTCAATAACCTGCCTGTACTGGAAGGCTCAGTGTTAGGACATATCAATGCAGACATATCGGGGATGAAGATCCCATGGCTTTATGTAGGAATGTGTTTTGCGACATTTTGCTGGCACAATGAAGACCATTGGAGCTACTCCATCAACTACCTTCACTGGGGTGAACCGAAAACATGGTATGGTGTCCCCGGTTCGAAGGCTGAACAGTTTGAAGCAGCCATGAAAGCAGAGGCACCTGAGTTGTTCCAGCTGCAACCCGACTTACTGCACCAGCTTGTTACTATTATGAACCCAAATATACTTATGAAAGCTGGAGTACCAGTTTAcagGACAGACCAACATGCGGGAGAGTTTGTGATAACCTTCCCGCGCGCGTACCACGCCGGTTTCAATCAAGGATACAACTTCGCTGAGGCGGTCAACTTCACACCGGCAGACTGGCTGAAAATGGGTCGCGAGTGCATTGCCCATTATTCCACACTGCGCCGGTACTGCGTGTTCTCCCACGATGAGCTGGTTTGCAAGATGGCCCTCGAGGCAGATACGCTCAGCCTCACTGTGGCGCTAGCAGCCTACAGAGATATGAGGACCATGTTGCACGATGAAAGAAAGCTGCGGAAGGGACTGCTTGATTGGGGCGTCACGGAGGCGGAGCGCGAGGCTTTTGAGCTGCTGCCGGACGACGAGCGGCAGTGTCAGCTTTGCAAGACGACGTGCTTCCTGTCGTGCGTGACTTGTGCTTGCACCACTCACGTCGCCTGCCTGCGACACTACGCGCAGTTGTGCACGTGCGCGCCTGCAACGCACAAGCTCAGGTATCGCTATACGTTGGACGAATTGCCAGCGATGTTggaaaagttaaagaaaaaatcgGAACTGTTTCGCGAATGGGCAGAAGCTGTGCAGAACGCATTGGATCCGGACACGCCCAAAACCTGTGATCTGGACGGACTGAGGGCACACCTGCGACGCGCACACGAACTTAAGATGCACAAAACAGAATTAGTGAGAGCGCTGGAGACAGCGATAGAGGACGCGGAGAAGTGCGCTTCGGTCATCCAGCAACTGGATCTTAACAAGATGCGCACGCGAACGCGTCACCACGACCCCAAGTACCGACTCACTATTCATGAGCTGACCCTGTTCGCTGCAGAGATCGACGGCTTGGCCTGCGTACTCCCTGAAGGTTCAGCGGTAAAGGAAGTATTAAGACAAACGGAGGAGTTTGAAGATCGAGCGACGGAACTCCTCAGTAAGGATTTGGAGGAAGTTGAGGCAACGACCGTTAGAGAGTTGGAAGAGgtagtAGAATTAGGGTCCCGCTTATGCATAGTGCTGCCACAGCTGAGCGCGCTGCAGGCCAGGCTGCTGCAGGCGCGTTGGTTGGAAGAAGTGCGCACTATGCGAGAGGACTGCGCTGCGCTTACACCGCCTGTGCTGGAGAGACTTCTAAGGGATGCGGACTCGGTGCTCCCACATCGAAAGGTGGAGCAGGAGAGGGCGACCCTTTATAAGCTGAGAGCGCAAGTAGAGGAATGGGAGCAGCGAGCCCAAGCAGTGCTGATTGATAACCGGACGGAAGGCAGTGGCGAGGCGCAGCACACGAGCCTGGCAGAGCTGGATGCACTTCTGGCTGAGGGAGACGAGATCGAGGCAGCTTTGCCTTCCCATCACGCGCTGCACCAAGCAGTCGCACATGCACGCGATTGGTTGGCAAAGGTTGAGGAGATGCAGTCCAAAGACCTTTACCCGTATATGCACAGCGTCGAAAACCTCGTAAAACGCGGACAGCAAATACCTTTGGCGTTATTCGAGAAGGACCAGCTAGCAGCCGCGCTACAGTCCGCGCGGGAGTGGAAGAGGGGTGCTGCGGACATGTTTCTTAAGAAGaactGGCCGTATAGTCTACTGGAGGCGTTGTCCCCGCGCACCGAGCACAGCGGTACGCAGCGACGCCGCGCCCGCGAGCCCGCCGCCGAGCCCAGCGCCTTTCTGCAGAATTTTAGTGAAGACGCCACGCCCACGGAGATCGTCGCGGCGTTCAAGCAGGCAGAGCACAGGGAACTGGCCGCTGTTAAGGAACTTAGAGCACGGAACATACGTAAAGAGGTCCGTGCGGCACCAACCGCCGGAGTGACGTTCTGCATATGCCAGAAGCGGCAGTACGGCGTGATGTCCCAGTGCGAGCTCTGTAAGGACTGGTTCCATGCTTCATGTGTAGCGTCTGCCAAAGAAGAGAGGGAAGCGTCGCCGGAACGAGCGGAAACATTGTATCCCAGCGGCGAGCAAAAGTTCCTCTGCCCGGACTGCATGCGCACCAAGAGGCCGCGACTACACCGTATTCTGGCTTTACTAGTATGGTTACAAAAGCTACCGGTGCGGTTGGCGGAGGGCGAGGCCCTGCAGTGTGTGACAGAGCGCGCGATGGCGTGGCAGGACTCTGCGCGGGCGCTCCTCGCGGCAGTACCGCACCATCACCAACCCGAGCACAGGAAAGACACCCTTACACATGCGTCCAGGTCATCGGCGAGCGTGGAGCACGCGTACAGTGCGACGCCCAGGTCGCCTAGTACTCGCGTTACACCCGGTCTGCTGCAGAAGTTGGAAGATCTAATGTTGGAAGGAGACCTGTTAGAAGTGAGACTGGAGGAGCAGGCGCAGGTGTGGTGCGCGGTGGTGTGCGCGCGTGGCGTGGAGGGGCGGCGCAGTGCCCGCGTGCTGGATGCCGGGCGGCGCAAGAGGCCGCAGCGCGCGCCGCGCCCTCACCGCCAGCTGAAGCGCACACGTCCGCACCATGGGGGACCCAGCACCACAAAGAATACGGTTAAACGAGGCTCTGCTACCAcaactaattatttaaatagaaaacagGGCATGTCATCGGGCTCGGGCCTCATGATGAGGAAACACTACATGGCACGACAGGAGCGGCGCAAGCGCGGTTTGGCGGCCTCAACACGAGGCAAGCACGCGCGTCAGTCGAGGCTTGCTCAACATCGTGGTACGGGAGGAAATTCCGCGGGCGCGCCCGCGGGGGCAAGTGGCGGCGGCGCAGGGACGGCGCGGCGCACCAATGCATCCGCTCGCCGCAGCAGTACCTCCTCCGTGTCATCCGCTTCTTCCGACGAGGACTGTGCCGCGGACAATTGCCTCCGGCCTACTGgcAAGGAGGTGGATTGGGTGCAGTGCGACGGTGGCTGTGACCAATGGTTCCATATGCATTGCGTGGGGCTCAGCCGCGCGGCGCTGCGCGATGACGACGACTACGTTtgcggcgcgtgcgcacgcgAGCGTAACTAA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKSSGAVGDSKETKIEVKTEHTPEKAAAATRSRSASKCPPAAATPPPARRYKSSEPEPEAEGSHTEGALPGADEDRKLRTPIKEENPETRRSPRENKWMSSAGSCGVVRSRRLREHRLSNMTVSVTPAPAPPPPMHNPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPAEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKMSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADTLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCQLCKTTCFLSCVTCACTTHVACLRHYAQLCTCAPATHKLRYRYTLDELPAMLEKLKKKSELFREWAEAVQNALDPDTPKTCDLDGLRAHLRRAHELKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTEEFEDRATELLSKDLEEVEATTVRELEEVVELGSRLCIVLPQLSALQARLLQARWLEEVRTMREDCAALTPPVLERLLRDADSVLPHRKVEQERATLYKLRAQVEEWEQRAQAVLIDNRTEGSGEAQHTSLAELDALLAEGDEIEAALPSHHALHQAVAHARDWLAKVEEMQSKDLYPYMHSVENLVKRGQQIPLALFEKDQLAAALQSAREWKRGAADMFLKKNWPYSLLEALSPRTEHSGTQRRRAREPAAEPSAFLQNFSEDATPTEIVAAFKQAEHRELAAVKELRARNIRKEVRAAPTAGVTFCICQKRQYGVMSQCELCKDWFHASCVASAKEEREASPERAETLYPSGEQKFLCPDCMRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDSARALLAAVPHHHQPEHRKDTLTHASRSSASVEHAYSATPRSPSTRVTPGLLQKLEDLMLEGDLLEVRLEEQAQVWCAVVCARGVEGRRSARVLDAGRRKRPQRAPRPHRQLKRTRPHHGGPSTTKNTVKRGSATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLAASTRGKHARQSRLAQHRGTGGNSAGAPAGASGGGAGTARRTNASARRSSTSSVSSASSDEDCAADNCLRPTGKEVDWVQCDGGCDQWFHMHCVGLSRAALRDDDDYVCGACARERN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
80% Identity
iTF_01494843;