Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_905187575.1
Location
LR994597.1:6126001-6156021[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8e-25 2.8e-21 76.3 0.0 2 89 101 184 100 184 0.93
2 2 8 2.9e+04 -3.9 0.0 46 81 1290 1333 1279 1334 0.58

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACATTTACTGTCCCTCCGGAGGCTCCAGTCTTTGAGCCCACCATCGAAGAGTTCCAGGACCCTCTGGCGTACATCAGCAAAATAAGACACATCGCAGAAAAATCGGGTATTTGCAAGATAAAACCCCCCGCACATTGGCAGCCACCATTTGCTGTGGATGTCGACCGTTTGCGATTCACTCCAAGGATACAAAGATTGAATGAACTGGAGGCAATAACGAGGGTGAAGCTAAATTTCCTAGACCAAATAATCAAGTTTTGGGAGCTCCAGGGATCGGTGTTGAAGATTCCCACAGTGGAACGAAAGCCCCTAGATTTGTACGCACTACACAAGCTTGTAAAGGAAGCTGGTGGGTTTGAGGTATGTTCCGCGGAACGAAAATGGTCGAAAATAGCGAGGCGCATGGGACATCCCCAGGGGAAAGGGGTCGGCTCCATCCTGAAGAATCACTACGAGAGAATACTCTACCCCTACGACGTGTTCAAGAACAACGGAGTCCTCGCCGATAGTAAAGAAACAAAAATAGAGGTGAAGAACGAACAGACCCCTGAGAAGGTGGGTCGCCGCTCCAGCAGTAAGCCCCCCGCTACGCCCTCCCCCGCGCGCCGCTACAAGAGCGCGGAGCCCGAGCCTGCGGAGGGGTCACACACCGAGGGCGCGTTGCCGGCCGACCACAAGACGCCGATAAAAGAGGAGCCTGGAGAGAATCGTAGAAGTCCACGGGAGAACAAGTGGATGTCCTCGGGGGGTAGCTGCGGGGCGCGCGCCCGGGTGCTCCGCTCCACCAAGCTGAGGGAACACCGGCTGAGTAACATGACAGTGTCTGTCACCCCCGCACCGCCGGTCGTACATCCTGATGACCCGCTACAACCGGCCTTTAAAAAAGACCAGGATTTGGCGCCGTTGCCGCGGCTTCACGATGACCCGCTGGCCAAGTACATGTGCCACGTGTGCGGGCGCGGCGACGTGGAGGAACAGATGCTGCTGTGTGACGGCTGCGACGACTCCTACCATACGTTCTGCCTGGTGCCGCCGCTGGCTGACGTGCCCAAGGGGGACTGGCGGTGTCCCGTGTGTCTCGCTGAGGAGGTAGCTAAACCGACTGAAGCGTTCGGTTTCGAACAAGCCAGCCGCGAGTATACACTGCAACAGTTTGGAGAGATGGCAGACCAATTCAAATCAGATTATTTCAACATGCCTGTACATATGGTTCCAACGTCAGCTGTTGAACGGGAATTTTGGAGAGTGGTTTCCTCGATTGATGAAGACGTCACCGTAGAATACGGAGCAGACCTTCACTCAATGGACCATGGTTCAGGTTTTCCTACCAAATCGAGTGCACATCTATACCCCGGCGAGCAACAGTACGCAGAGTCCAGCTGGAATCTAAACAATTTGCCCGTTCTGGAAGGTTCCGTCCTGGGACACATCAACGCAGACATATCTGGAATGAAGATACCGTGGCTGTATGTGGGTATGTGCTTCGCGACTTTCTGCTGGCACAACGAAGACCACTGGAGCTACTCCATCAACTATTTGCACTGGGGCGAACCAAAAACTTGGTATGGAGTACCCAGCTCAAAAGCTGAACAATTCGAAGCCACCATGAAGGCGGAAGCTCCGGAACTGTTCCAGCTTCAGCCGGATCTGCTACATCAGCTAGTCACCATCATGAACCCGAACGTGCTCATGAAGGCTGGAGTCCCTGTTTACAGATGTGACCAAAATGCTGGGGAATTTGTTATCACTTTTCCTAGGGCATACCACGCTGGATTCAACCAAGGCTACAACTTTGCTGAGGCTGTCAACTTTACACCTGCTGATTGGCTAAAGATGGGCCGCGAGTGCATATCCCACTACTCGACGTTGCGGCGCTACTGCGTGTTCTCGCACGATGAGCTCGTGTGCAAGATGGCGCTGGAGGCGGAGTCGCTCACGCTCACGGTGGCGCTGGCGGCGTACCGCGACATGCGCACCATGCTGCACGACGAACGCAAACTGAGGAAGGCGCTGCTGGACTGGGGTGTCACCGAGGCCGAGCGCGAGGCGTTTGAGCTCCTTCCTGATGACGAGCGTCAGTGTCACGAGTGTAAGACGACGTGTTTCCTGTCGTGCGTGACGTGTGCGTGCACGCCGCACGTGGCGTGCCCGCGGCATTACAGCACGCTGTGCTCGTGCCCGCCGGCGGTGCATAAACTGAGATATCGTTACACGCTGGACGAGTTGCCCGCAATGCTGGACAAGTTGAAACGCAAGTCGGATCTGTTCCGCGAATGGGCGGAGGCGGTACAGAACGCGTTAGACCCGGACACGCCCAAAACCTGCGACTTGGACGGACTGCGCGCCCACCTCAAACGAGCCCATGATCTCAAGATGCACAAAACGGAGCTGGTGCGCGCGCTAGAGACGGCTATCGAGGACGCGGAGAAGTGCGCCACCGTGATCCAGCAGCTGGATCTGAACAAGATGCGCACGCGCACCCGCCACCACGACCCCAAGTATCGGCTGACCGTGCACGAGCTGACGCTCTTCGCGGCCGAGATAGACGGCCTGGCGTGCGTGCTGCCCGAGGGTTCGGCTGTAAAAGAAGTTCTACGTCAAACTGAAGAGTTCGAAGATCGGGCGACAGATTTGTTAAATAAAGATCTGGATGATACAGATGCAGCATACGTTAAGGATTTGGAAGAGGTGTGCGATCTCGGTGGGCGTCTGTGCATAGTTCTACCGCAGTTGGCGGCGTTAACAGCGCGCGCTGCGCAGGCGCGCTGGCTGTTGGACGCTCGCGACGCACGTGCCGCGGCGGCGTCTCCCGCGCAGCTCGAGAAACTGTTGCAGGACGCGACGGCGCTCGTGCCGCACGCGCGACTCGAGCCCGAGCGAGCGGCGCTACAGAAGCTGCGATTCCAAATAGAAGACTGGGAGACGAGGGTGAAGGCGGTTCTTATCGAGCCCAACTCTGTGAAGCAAGAGCCTACAGACACAGAGGACCCGCAACACACGACGTTGTCTGAGCTGGAAGCGCTCTTAACTGAGGGAGATGATATTGAGGCTTCCCTACCCTCGCACCACGCGTTACATACAGCTATATCGCATGCCAAAGACTGGCTGTCCAAGGTGGAAGAGATGCAGTCAAAGGAATTATACCCGTACATGCACAGCGTAGAGGCGCTAGTGAGGCGCGGCTCGCAGATCCCGCTGGCTCTGTACGAGAAGGACCAACTGGCGGCCGCGCTGCACTCCGCGCACGAGTGGCGGCGCGGAGCCGCTGAGATGTTCCTTAAGAAGAACTGGACGTTCTCGCTCCTGGAAGCGTTGTCCCCTCGCGCCGGTCCAGCCGAGGGCGCGGGGCGACGGCGCGGGCGCGGCGAGTGCTCCGCCGCGCTGCTGGAACACTTCAGCGAGGACGCGTCGCCCACCGAGATCGTGGCCGCGTTCAAGAACGCCGAGCAAAAGGAGCTGGCTTACGTGAAAGAGCTGAGAGCCCGCAACTTGCGCAAGGATGTGAGAGCACCGCCGACCGCCGGACTGACTTTCTGCACGTGTCAGAAGCGGCAGTACGGTGTTATGTCACAATGTGAAATATGCAAGGACTGGTTCCATGCGTCATGTGTCGCCGGCACCAAGGAGGAGGAGCCTGAAGGGGGGGAGTCCCCCGAGCGCGCCGACCCCCCGCCGGAGCCCAAGTTCATATGCCCGGACTGCACGCGCACCAAGCGTCCGCGGCTGCACCGCATACTCGCGCTGCTGGTCTGGCTTCAGAAGCTACCAGTTCGTTTGGCGGAGGGTGAGGCGCTGCAGTGCGTTACGGAACGCGCGATGGCGTGGCAGGACGCAGCGCGTGCGCAGCTCTCATCACTACCGCCGCGTACCCCCGCCAAGGACTCGCACGCTGCCAGGTCATCAGCGAATTTGGAACACGCCTACAGCGCCTCGCCGCGTTCACCCAGTACCCGGGTGAGCCCTGGTCAACTACAGAAACTTGAAGATCTCATGCTGGAAGGTGACCTTTTAGAGGTGCGACTCGAGGAACAAGCGGGCGTGTGGAGTACAGTCTGCGCCGCGCGTGCGGCCGAGGGGCGGGGCGCGCGCGTTCTCGACGCCGGGCGACGCAAGCGCGCGCAACGCACGCCGCGCCCGCACAGGCAGCTGAAGCGCACGCGTCCACACCACGCGGCAACCGCCACCAAAACAATCAAACGTGGCTCCAGCACTACCACGAATTATCTCAATAGGAAACAGGGTCTCTCATCAGGGTCTGGCTTGATGATGCGGAAACACTACATGGCCCGCCAGGAGCGACGCAAACGAGGCCTGCCCACGACCAGAGGCAAACTCGCGCGACATACGCGACCAGTGGGTCAAGCTCGAGCAGCCGCGGCGCGCCCGGGTCCAAGTCGTCAGGAGTCGAGTTCCTCGTCTGAGTCGTCGGCGGAGGATGATGAGGACTGTGCCGCCGAATCGTGTCTTCGTCCCACAGGAAAAATATACTGGGTACAATGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTGGGCCTGAGTCACGGCGCGCTACGCGAGGACGACGACTACGTGTGCGGTGCGTGTGCGCAACCCCGCTCAGCCGGCAAGCCCCGCCCCGCGCCTACGTCACGCCCCGCCCCCGCGTCGCGTCCCGCTCCAGCGTCTCGCCCAGCCTCCTCGCGAGTTGAGTGA
Protein Sequence
MGKCDEANVEVNMGDSASPMKPDNFTFTVPPEAPVFEPTIEEFQDPLAYISKIRHIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKLVKEAGGFEVCSAERKWSKIARRMGHPQGKGVGSILKNHYERILYPYDVFKNNGVLADSKETKIEVKNEQTPEKVGRRSSSKPPATPSPARRYKSAEPEPAEGSHTEGALPADHKTPIKEEPGENRRSPRENKWMSSGGSCGARARVLRSTKLREHRLSNMTVSVTPAPPVVHPDDPLQPAFKKDQDLAPLPRLHDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVAKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSAVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEATMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRCDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECISHYSTLRRYCVFSHDELVCKMALEAESLTLTVALAAYRDMRTMLHDERKLRKALLDWGVTEAEREAFELLPDDERQCHECKTTCFLSCVTCACTPHVACPRHYSTLCSCPPAVHKLRYRYTLDELPAMLDKLKRKSDLFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCATVIQQLDLNKMRTRTRHHDPKYRLTVHELTLFAAEIDGLACVLPEGSAVKEVLRQTEEFEDRATDLLNKDLDDTDAAYVKDLEEVCDLGGRLCIVLPQLAALTARAAQARWLLDARDARAAAASPAQLEKLLQDATALVPHARLEPERAALQKLRFQIEDWETRVKAVLIEPNSVKQEPTDTEDPQHTTLSELEALLTEGDDIEASLPSHHALHTAISHAKDWLSKVEEMQSKELYPYMHSVEALVRRGSQIPLALYEKDQLAAALHSAHEWRRGAAEMFLKKNWTFSLLEALSPRAGPAEGAGRRRGRGECSAALLEHFSEDASPTEIVAAFKNAEQKELAYVKELRARNLRKDVRAPPTAGLTFCTCQKRQYGVMSQCEICKDWFHASCVAGTKEEEPEGGESPERADPPPEPKFICPDCTRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARAQLSSLPPRTPAKDSHAARSSANLEHAYSASPRSPSTRVSPGQLQKLEDLMLEGDLLEVRLEEQAGVWSTVCAARAAEGRGARVLDAGRRKRAQRTPRPHRQLKRTRPHHAATATKTIKRGSSTTTNYLNRKQGLSSGSGLMMRKHYMARQERRKRGLPTTRGKLARHTRPVGQARAAAARPGPSRQESSSSSESSAEDDEDCAAESCLRPTGKIYWVQCDGGCDQWFHMHCVGLSHGALREDDDYVCGACAQPRSAGKPRPAPTSRPAPASRPAPASRPASSRVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_00744388;
80% Identity
-