Basic Information

Gene Symbol
Kdm5
Assembly
GCA_959347395.1
Location
OY365752.1:4683377-4697456[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-24 3.7e-21 75.9 0.0 2 89 101 184 100 184 0.93
2 2 10 2.7e+04 -3.8 0.0 6 55 1055 1101 1053 1112 0.64

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACATTCACCGTACCCCCTGAGGCACCTGTCTTCGAGCCAACTCCTGAAGAGTTCCTCGATCCCTTGGCGTACATCAGCAAAATCAGACCTATTGCTGAGAAGTCGGGgatatgcaaaataaaaccCCCCGCGCACTGGCAGCCACCATTTGCTGTAGATGTAGACAGGCTGAGGTTCACTCCTCGGATACAACGGTTAAATGAGTTGGAGGCTATTACGAGAGTGAAGTTAAACTTTCTCGaccaaataatcaaattttggGAGCTCCAGGGCTCTGTTCTGAAGATACCGACTGTGGAAAGGAAGCCCTTAGATTTGTATGCActacataaaattgtaaaggAAGCTGgtGGTTTTGAAGTATGTTCAGCAGAGCGCAAGTGGTCGAAGATAGCTCGTCGCATGGGACATCCTCAGGGGAAAGGTATAGGTTCCATATTGAAGAACCACTACGAGCGGATCCTGTATCCATATGATGTGTTCAAGAATAGCGGTGCGGTTGGCAATGATAGCAAGGAGACGAAAATTGAAGTCAAGGGCGAACAGACCCCCGAGAAAACGGGCCGTCGGTCCAGCAAACCCCCCGCTGCGACTCCGCCCCCCGCCAGGCGGTTCAAGAGTTCGGAGCCCGAGGCCGCCGAGGGCAGCCACACAGAGGGCGCCCTACCCACGGATGACGTCAAAAAGACTCCCATCAAGGAAGAGCCCGGGGAGACCAGACGGAGTCCACGCGAAAACAAATGGATGTCTCAAGCGGGCAGCTGCGGGGCCCGCGCGCGCGCCGTGCGCTCCACGCGCCTGCGCGAGCACCGCCTCAGCAACATGACCGTGTCCGTCACGCctgcgccgccgccgccgctgCTGCACCCTGACGACCCGCTCGCGAAGTATATGTGTCACGTGTGCGGTCGCGGCGACATTGAGGAGCAGATGCTACTGTGCGATGGCTGCGACGATTCCTACCACACGTTCTGCCTTGTGCCGCCCCTTGCAGACGTGCCGAAGGGAGACTGGCGCTGTCCCGTGTGCCTCGCCGAAGAGGTATCAAAACCGACAGAGGCCTTCGGCTTCGAACAAGCGAGCAGAGAATATACTCTACAGCAGTTTGGAGAAATGGCTGACCAGTTCAAatcagattattttaatatgcccgtacatatggTGCCAACATCGACAGTGGAGCGTGAGTTTTGGCGAGTAGTCTCATCCATAGACGAGGACGTGACAGTGGAGTATGGCGCCGATTTGCATTCCATGGACCATGGATCagGCTTCCCTACTAAGTCCAGCGCACACTTGTACCCGGGCGAGCAGCAGTACGCAGACTCCTCTTGGAACCTCAACAACCTACCCGTGTTAGAAGGTTCAGTGCTAGGACACATCAATGCAGACATATCTGGAATGAAGGTACCTTGGTTGTATGTGGGGATGTGTTTTGCTACATTTTGCTGGCACAACGAAGATCATTGGAGCTATTCTATCAACTACTTGCATTGGGGAGAAGCAAAGACTTGGTATGGAGTGCCCAGCTCTAAAGCCGAACAGTTCGAGGCAGCTATGAAAGCAGAGGCTCCGGAGCTGTTCCAGCTGCAACCGGATCTGCTGCATCAGCTTGTCACCATCATGAACCCCAACGTACTCATGAAGGCTGGAGTGCCTGTTTATCGAACGGACCAGCATGCTGGTGAATTCGTGATAACGTTTCCTCGAGCTTACCACGCCGGTTTCAACCAAGGATATAACTTTGCTGAGGCTGTCAACTTCACTCCCGCTGATTGGctGAAAATGGGTCGTGAGTGCATAACACACTACTCCACATTGCGACGGTATTGCGTGTTCTCGCATGACGAGCTAGTATGCAAGATGGCTCTGGGGGCGGACTCACTGAGTCTCACGGTGGCGTTAGCGGCCTACAGAGACATGCGTACCATGCTCCACGACGAGCGCAAACTACGAAAAGGACTATTGGACTGGGGTGTAACGGAGGCGGAGCGAGAAGCATTCGAACTTCTTCCAGACGACGAGCGCCAGTGCCACGAATGCAAGACTACGTGCTTTCTGTCATGCGTTACGTGCGCCTGCACGCCACAGGTGTCGTGTTTGAGGCACTACGACCAGCTGTGCTCCTGCCCGCCATCTTCGCACCGCTTGCGATATCGCTACACACTAGACGAGCTTCCGGCTATGTTAGAGAAACTAAAGCGTAAATCGGAACAATTCCGCGAATGGGCGGAAGCCGTCCAGAACGCGCTGGATCCTGACACACCGAAGACTTGCGACCTCGATGGACTGAGGGCACATCTGAAAAAAGCGCATGACTTGAAGATGCACAAAACAGAATTAGTCCGCGCACTAGAAACAGCAATAGAAGACGCTGAGAAGTGTGCGTCAGTGATCCAGCAACTGGACCTTAACAAGATGCGCACACGCACGCGCCACCACGATCCTAAATATCGTCTCACCATACACGAATTGACTCTGTTTGCGGCCGAAATAGACGGACTCGCATGCGTGCTTCCTGAAGGCTCGGCTGTGAAAGAAGTGCTTCGGCAAACTGCTGAATTTGAGGACAGAGCGATCGAACTGCTGGCTAGAGATCTAGATGACTGTGATGCTTCGTCTGTTAGGGAATTAGAAGAGGTGGTAGATCTTGGCTCCCGGTTGTGCATCGTGCTGCCGCAGCTGTCTGCGCTTCAGGCGCGGTTGCAGCAGGAGCGCTTCGTGCTTTCCGTGCGCTCTCATACCGAGGACTGCGCCTCCCTCACCCCAGAACTCGTCGACAAACTGCTGGCGGACGCGGACACCGTGCTGCCGCACCGACGGGTCGAGCTCGAGCGGGCCGGCCTCTATAAGATTAAATTGCAAGTGGAGGAGTGGGAGGCGAAGGCCCGTGCGATCCTCGAGCCCTCTCGCACGCGCGAGGAGGACGCGCAGAGCACGCTGAGCGACCTCGACGAGCTGCTGCGCGGCGCCGACGACGTGCGCGCCGCGCTGCCCTCCAGACACGCGCTCAGCGCCGCCGCGCACCACGCACGGGACTGGCTCGCCAAGGTGGAGGAGATGCAATCCAAGGAGCTGTACCCGTACATGCACAGCGTGGAGGCTCTGTGCAAGCGCGGCGCGACCATCCCGGTGGCGCTGGTGGAAAAGCGCCAGCTGGCCGCCGCGCTGCTGTCGGCGCGCGACTGGCAGCGGGGAGCCGCTGATATGTTCCTCAAGAAGaaTTGGCCATACTCTCTCCTCGAAGCCTTGTCTCCTCGGGCTGAGTGTGCTCCTCGTCGGAAGAAGGGAGACTCTGAAGGGCTGCTGCAGCACTTCAGTGAGGAGGCCACACCTACGGAAATTGTGGCAGCATTTAAACAGGCGGAACAGAGAGAGCTGGCTGCTATTAAAGAACTCAGAGCGAAAAATATGCATAAGGAAGTGCGCTCCCCCGCCCCGGGGGTGACTTTCTGCGTGTGTCAGAAGCGGCAGTACGGTGTCATGACGCAGTGCGAACTCTGCAAGGATTGGTTCCACGCATCCTGCGTGTCGTCGAGTCGGTCCGAGGAGGCGGGCTCCTCGCCGGAGCGCGAGCCCGAGCCCGGCCCCACTCCGGCGCCCGACGCCAAGTTCCTGTGCCCGGACTGCGCGCGCACCAAGCGACCGCGACTGCACAGGATACTGGCCTTGTTGGTGTGGCTGCAGAAGTTGCCGGTCCGTCTGGCGGAGGGCGAAGCCCTACAGTGTGTGACGGAGCGCGCCATGGCGTGGCAGGACTCTGCGCGGGCCATGCTGGCGGCACTGCCCGCAGCTCGCAGCGAGCGAGCAGAGCGAGGGGACAGGACGGCGCGGACGGACACGCACAGGTCTTCAGCGAGCGTGGAACACGCTTACAGTGCCACCCCACGCTCCGGCACGGCGCGAGTGTCACCTGCCATGCTGCAGCGACTCGAGGATCTCATGATGGAGGGCGACTTACTCGAGGTGCGTCTGGAGGAGCAGCAGCTGGTGTGGGGCGCGGTGTGGGCGGCGCGCGCGGCTGAGGGCCGGCGGGCGGCGCGTGTGCTGGACGCGGGACGCAGGAAGAGGGCGCCGCGAGCGCCCCGGCACCACCACCCGCTCAAGAGGACTCGTGTGCTGCACGGACCGAATACCACAAAAACTACGATAAAGAGGGGATCGGCAACTACGACAAATTACTTAAATCGGAAACAGGGCATGTCTTCGGGCTCGGGACTGATGATGCGCAAGCACTACTTAGCGCGGCAGGAGCGCCGCAAGCGCGCGCTCCCCCAGCGACCCGCGCCGCGGCCTCGCCCGGGCCGAGCGCGCTCGCCCCGTGCTCCTCGCTCCCCTCGCGCTCCCCGTTCCCCGCGCTCCAGCTCCTCCTCACGCTCTTCTGCCGATGACGAGGAGGACTGCGCGGCAGCCGACTGTCTACGACCTACCGGCAAAGAAGTGGATTGGGTGCAGTGCGATGGCGGTTGCGACCAGTGGTTCCACATGCACTGCGTGGGACTCAGTCGGGGAACGCTCAGGGAGGACGACGACTACGTGTGCGGCTCGTGCGCACAGCGACCGAACTGA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKNSGAVGNDSKETKIEVKGEQTPEKTGRRSSKPPAATPPPARRFKSSEPEAAEGSHTEGALPTDDVKKTPIKEEPGETRRSPRENKWMSQAGSCGARARAVRSTRLREHRLSNMTVSVTPAPPPPLLHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECITHYSTLRRYCVFSHDELVCKMALGADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCHECKTTCFLSCVTCACTPQVSCLRHYDQLCSCPPSSHRLRYRYTLDELPAMLEKLKRKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKKAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDRAIELLARDLDDCDASSVRELEEVVDLGSRLCIVLPQLSALQARLQQERFVLSVRSHTEDCASLTPELVDKLLADADTVLPHRRVELERAGLYKIKLQVEEWEAKARAILEPSRTREEDAQSTLSDLDELLRGADDVRAALPSRHALSAAAHHARDWLAKVEEMQSKELYPYMHSVEALCKRGATIPVALVEKRQLAAALLSARDWQRGAADMFLKKNWPYSLLEALSPRAECAPRRKKGDSEGLLQHFSEEATPTEIVAAFKQAEQRELAAIKELRAKNMHKEVRSPAPGVTFCVCQKRQYGVMTQCELCKDWFHASCVSSSRSEEAGSSPEREPEPGPTPAPDAKFLCPDCARTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDSARAMLAALPAARSERAERGDRTARTDTHRSSASVEHAYSATPRSGTARVSPAMLQRLEDLMMEGDLLEVRLEEQQLVWGAVWAARAAEGRRAARVLDAGRRKRAPRAPRHHHPLKRTRVLHGPNTTKTTIKRGSATTTNYLNRKQGMSSGSGLMMRKHYLARQERRKRALPQRPAPRPRPGRARSPRAPRSPRAPRSPRSSSSSRSSADDEEDCAAADCLRPTGKEVDWVQCDGGCDQWFHMHCVGLSRGTLREDDDYVCGSCAQRPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_00959949;
80% Identity
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