Basic Information

Gene Symbol
Kdm5
Assembly
GCA_905220455.1
Location
LR999994.1:9564280-9592724[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-25 1.7e-21 76.8 0.0 2 89 101 184 100 184 0.94
2 2 4.9 1.6e+04 -3.3 0.0 45 62 1283 1301 1271 1319 0.69

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAGGCTAATGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCCATGAAACCCGACAATTTCACGTTCACCCCGCCTCCAGAAGCCCCAGTCTTCGAGCCAACGCCAGAAGAGTTCCTGGACCCACTGGCGTACATCAGTAAAATACGACCTATCGCCGAGAAATCGGGCATTTGCAAGATAAAACCACCAGCGCACTGGCAGCCGCCGTTCGCAGTGGACGTGGACCGCCTCCGCTTCACGCCGAGGATACAGCGGCTCAATGAATTAGAGGCTATAACTAGAGTGAAGTTAAATTTCCTCGACCAGATAATCAAGTTTTGGGAGCTGCAGGGTTCGACCCTCAAGATCCCCACAGTGGAAAGGAAGCCACTGGACTTATATTCATTACACAAGATTGTACGAGAAGCCGGAGGCTTCGAAATATGTTCGTCAGAGCGGAAGTGGTCGAAGATTGCGCGGCGCATGGGCTACCCACAAGGCAAGGGCGTCGGTTCAATCCTGAAGAACCACTACGAGCGCATTCTGTACCCTTACGACGTGTTCAAAAGCAATGGAGCCGTCGGAGACAATAAAGAGACGAAGATCGAAGTGAAAACGGAGCAGACGCCGGAGAAGGCGACGGGCACGCGCAGTCGCTCCAGCAGCAAGTGCGCGGCGACTCCGCCCCCCGCGCGCCGGTACAAGCCGGAGCCCGAGCCCGCCGCGGAGGGCAGCCACGCCGAGGGCGCGCTGCCCGCCGGGCACGATGTCATCATGCACACGCCTGTCAAGGAGGAGAGCCCGGAGACCAGGAGGACCAGTCCTCGCGAGAACAAATGGATGTCGGCGGGCGCGAGCTGCGGGTCCCGCGGGCGCGCCACGCGCTCCACGCGCCTGCGCGAGCACCGCGTGTCCAACATGACCGTGTCCGTCACGCCCGCGCCGCCGCACCCGCCGCTGCGCCCCGACGACCCGCTAGCGAAGTACATGTGCCACGTGTGCGGGCGCGGCGACGTGGAGGAGCACATGCTGCTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTCGCCGACGTGCCCAAGGGCGACTGGCGCTGCCCCGTCTGCCTCGCCGAGGAGGTGGCGAAGCCAGCCGAAGCATTCGGTTTTGAGCAAGCGACTAGGGAATACACACTTCAACAGTTCGGCGAAATGGCGGACCAATTCAAATCTGATTATTTCAATATGCCTGTACATATGGTTCCGACGTCGACAGTAGAGAAAGAGTTCTGGCGCGTAGTGTCCTCAATAGATGAGGACGTCACAGTGGAGTACGGAGCAGACCTTCACTCAATGGACCACGGGTCAGGATTCCCGACCAAGTCCAGTGCTCACCTATACCCCGGGGAGCAACAGTACGCTGAATCCAGCTGGAATCTAAACAACCTTCCTGTGTTGGAGGGCTCAGTGCTTGGACATATCAATGCTGATATATCTGGGATGAAGATTCCATGGCTGTACGTTGGCATGTGCTTCGCCACGTTTTGCTGGCACAATGAAGATCACTGGAGCTATTCCATCAACTACTTACATTGGGGCGAGCCAAAAACATGGTACGGAGTCCCCAGCTCGAAGGCGGAGCAGTTCGAGGCGGCGATGAAGGCCGAGGCGCCCGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCACCAGCTCGTCACCATCATGAACCCTAATGTGCTCATGAAGGCCGGCGTGCCTGTATATAGGATGGACCAACACGCAGGCGAGTTCGTGATCACGTTCCCGCGCGCGTACCACGCCGGGTTCAACCAAGGATATAACTTCGCAGAGGCCGTCAACTTCACGCCCGCTGACTGGCTAAAGATTGGCCGCGAGTGTATAGCTCACTACTCAACACTGCGTCGCTACTGCGTGTTCTCGCACGACGAGTTAGTCTGCAAGATGGCGCTGGAAGCGGACACCCTCAGTCTTAGTGTCGCGCTCGCCGCGTACAGAGACATGCGCACCATGCTGCATGATGAGAGGAAACTGCGCAAGACGTTGCTGGACTGGGGCGTGACGGAAGCAGAGCGCGAAGCATTCGAGCTGCTGCCGGACGACGAGCGGCAGTGCCACCTGTGCAAGACCACGTGCTTCCTGTCGTGCGTGACGTGCACCTGCACGCCGCACGTGGCCTGCCTCCGACACTTCGCAGACCTATATCGATACACGCTCGACGAGTTGCCGGCGATGTTGGAGAAGCTAAAGAAGAAATCTGAGCAGTTCCGCGAATGGGCGGAAGCTGTACAAAATGCCTTGGACCCAGACACGCCCAAGACTTGTGACTTGGACGGACTTCGAGCGCATTTAAAGAAGGCTCATGATCTCAAGATGCACAAAACCGAGCTAGTGCGAGCTCTAGAGACAGCAATCGAGGACGCGGAGAAGTGCGCGTCAGTGATCCAGCAGCTGGACCTGAACAAGATGCGCACGCGCACGCGCCACCACGACCCCAAGTACCGCCTCACCATACACGAACTCACGCTGTTTGCGGCGGAGATCGATGGACTCGCCTGCGTGCTGCCTGAAGGTTCGGCGGTGAAGGAAGTGTTACGCCAGACTGCCGAGTTTGAAAATAAAGCTGCGGAACTATTGAACAAAGATCTTGACAAAATTGAACCGTCGTACGTACGAGAACTTGAAGAGGTGGTGGAACTGGGCTCCCGTCTCTGCATAGTGCTACCCCAGCTAGCGCCCCTCCAAGCGCGCCTCCAGCAAGTCAAGTTCATTGAAGAGGTCCAGGGCTACAGGGAGGATTGCTCCACACTCACCCCCGAGGTTATCGACAGGCTGCTCGAAGATGCAGATAAACTCGTGCCACATCATAGGGTCGAAGTGGAGAGGGCGGGGTTGTACAAACTTAAAGCGCAAGTAGAAGAGTGGGAGTCCCGCGCGCGCGCGATCCTGAACAACCCGGGCGGGCAGTACAGCACGCTGGCCGAGGTGGCGGCGCTGCTGGCCGACGCCGAGCGCGTGGACGCGGCGCTGCCCTCGCGCCACGCGCTGCACGCCGCGCACCTGCACGCACGGGACTGGCTGCTCAAGGTGGAAGAAATGCAGTCCAAGGACCTGTACCCATACATGCACAGTGTGGAGGCGATAGTGAAGCGAGGCGCGCAGATACCACTAGCTTTGTACGAGAAGGATCAGCTCGCCGCCGCGTTGCAGTCTGCTAAAGAGTGGAAAAGAGGCGCCGCTGATATGTTCCTTAAAAAGAACTGGCCGTACTCATTACTAGAAGCGTTATCCCCGCGCACGGACGTATCCGAAGGCTCTGGGGGTGCGCGGCGGCGGGTGCGGGGGGCGGGAGCTTCCAGTACAGCGGGGGGAGGGGGCACACCAGGCGGTGACGTAGAACCACCCCCCTCGTCGTTAGAGGCGGGGCTGTTCCTGAGAAACTTCAGTGAAGACTCCACGCCTACGGAGATAGTTGCTGCATTCAAACAGGCTGAGATGAACGAGCTTAACGCTATCAAGCAATTGAGGGCTAAGAACATGCGCAAAGAAGTGCGAGCGCCGCCCACAGCGGGCGTGACGTTCTGCGTGTGCCAGAAGCGACAGTACGGCGTCATGACGCAGTGCGAGCTGTGCAAGGACTGGTTCCACGCGTCGTGTATAGCGGCGTCGAAGGAGGAGCGCGAGGCGTCTCCGGAACGGGCGGAGGCGCCGGCATCGGGGGCGGAGCCCAAGTTCTTGTGCCCGGACTGCGTGCGGACCAAACGACCAAGACTCGATCGTATTCTCGCTTTGCTGGTATGGCTGCAGAAGCTGCCGGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACGCGGCGCGCGCGCTGCTCAACGACCACCGCCTGCCCGACCACCACCACCTAGACAGACAGGCAAGTCGAGAAAAAGCAGACAAATTAAATGCTGAACTCAAAAAAGCGACTGGAAGAGCACATGATGCCCATTTATCACAAAATCAAAGGTCGTGCGCGAGCGTGGAGCACGCGTACAGCGCGTCGCCGCGCTCGCCGCACGCCGCGTCGGCCGCGCTGCTGCACAAGTTAGAGGACCTCATGCTGGAAGGAGACTTGTTAGAGGTGCGGCTGGAGGAGCAGGCGCAGGTGTGGGCGGCGGTGTGGGCGGCGCGCGGCGCGGAGGGGCGGCGGGGGGCGCGCGCGCTGGACGCGGGCCGCCGCAAGCGCGCGCCGCGCCCCGCCCGCCACCACCACCCGCTCAAGCGCACGCGCACGCGCCACCACCACGGTACTACGACAACCAAACCCACAATGAAGAGGGGCACAACGACCACAACAAATTATCTCAACAGAAAACAGGGCATGTCATCAGGGTCAAGCCTGATGATGCGCAAGCACTACATGGCGCGGCAGGAGCGGCGCAAGCGAGGACTCGCAGCCACGCGAGGGAAACACCCCACGAGATTAGCCAATAACGGTGCAGACAGCGCGTCGCAGAGTTCTACTCGCGGCGCGGCGAGCGGCGGGCGGCGCAGCAGCTCGTCTTCAATGTCTTCCGCTGATGATGAAGAGGACTGCGCTGCCGCTAACTGCCTGCGACCCACCGGCAAGGAAGTGGACTGGGTGCAGTGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTGGGACTCAGCCGCGGCGCGCTGCGCGACGACGACGACTACGTGTGCGGCACCTGCGCGCACTAA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSTLKIPTVERKPLDLYSLHKIVREAGGFEICSSERKWSKIARRMGYPQGKGVGSILKNHYERILYPYDVFKSNGAVGDNKETKIEVKTEQTPEKATGTRSRSSSKCAATPPPARRYKPEPEPAAEGSHAEGALPAGHDVIMHTPVKEESPETRRTSPRENKWMSAGASCGSRGRATRSTRLREHRVSNMTVSVTPAPPHPPLRPDDPLAKYMCHVCGRGDVEEHMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVAKPAEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKIGRECIAHYSTLRRYCVFSHDELVCKMALEADTLSLSVALAAYRDMRTMLHDERKLRKTLLDWGVTEAEREAFELLPDDERQCHLCKTTCFLSCVTCTCTPHVACLRHFADLYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKKAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFENKAAELLNKDLDKIEPSYVRELEEVVELGSRLCIVLPQLAPLQARLQQVKFIEEVQGYREDCSTLTPEVIDRLLEDADKLVPHHRVEVERAGLYKLKAQVEEWESRARAILNNPGGQYSTLAEVAALLADAERVDAALPSRHALHAAHLHARDWLLKVEEMQSKDLYPYMHSVEAIVKRGAQIPLALYEKDQLAAALQSAKEWKRGAADMFLKKNWPYSLLEALSPRTDVSEGSGGARRRVRGAGASSTAGGGGTPGGDVEPPPSSLEAGLFLRNFSEDSTPTEIVAAFKQAEMNELNAIKQLRAKNMRKEVRAPPTAGVTFCVCQKRQYGVMTQCELCKDWFHASCIAASKEEREASPERAEAPASGAEPKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLNDHRLPDHHHLDRQASREKADKLNAELKKATGRAHDAHLSQNQRSCASVEHAYSASPRSPHAASAALLHKLEDLMLEGDLLEVRLEEQAQVWAAVWAARGAEGRRGARALDAGRRKRAPRPARHHHPLKRTRTRHHHGTTTTKPTMKRGTTTTTNYLNRKQGMSSGSSLMMRKHYMARQERRKRGLAATRGKHPTRLANNGADSASQSSTRGAASGGRRSSSSSMSSADDEEDCAAANCLRPTGKEVDWVQCDGGCDQWFHMHCVGLSRGALRDDDDYVCGTCAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
-
80% Identity
-