Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949128155.2
Location
OX421955.2:15856969-15884050[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-24 9.9e-21 75.1 0.0 2 89 72 155 71 155 0.93

Sequence Information

Coding Sequence
ATGCCAGGTCTTCCCAGTGAAAACGACAGCGGTGTCATCAGCATAGGAAAATACTGTAGCATTGCTGATCCTGAGGCTGCAGAGGTTATTAATATACAGGAGAAACAATGTAGGACCCAACACGCTTCCCTGGGGGACACCAACCGTGATATTAGCATCGCGACTAAGGAATGTTCCTACCTTGACTCGTTGCTTTCGGCGATTACCCGGGTGAAGCTGAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAGGGCTCCGTGCTCAAAATCCCCACGGTGGAACGGAAGCCGCTGGACCTTTATGCTCTACACAAGATTGTCAAGGAAGCAGGTGGCTTCGAAGTATGCTCATCAGAGCGAAAATGGTCGAAGGTGGGTCGTCGCATGGGCTTCCCGCAAGGAAAGGGCATCGGCTCCATCCTCAAGAACCACTACGAGAAGATCTTGTACCGGTACGACATCTTCAAGAACAATGGAACCGATAATAAGGATACGGATATCAAAGTAAAAGGAGAGCAAACGCCCGAAAAAGCAAGCGGCACACGCAGCCGTTCAACAAGCAAATGCACGGCGGCCGCGACCCCGCCGCCGGCGCGCCGGTTCAAGCCGGACCCGGACGGGCCCACGCCGGCCGACACCGTGCCGGCCGACCGGACGCTCAGTCAGCTGCAGGAGGAGGCTATGAAGACGCCTGTTAAGGAAGAGAGTCCCGAGACTAGGAGGAGTCCTCGCGAGAACAAGTGGATGTCTGCAGCAGGGTCCTGCGGGGCCAGATCCAGGGTAACGCGCGCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACGGTGTCCGTGACGCCCGCGCCGCCCTCCAGCCTCGCGCTGCACCCGGACGACCCGCTGGCGAAGTACATGTGCCACGTATGCGGGCGCGGTGACGTAGAGGAGCAAATGTTGCTCTGTGACGGCTGCGACGACTCTTACCACACCTTCTGCCTGCTGCCGCCGCTCGCAGACGTGCCCAAGGGAGACTGGCGCTGCCCCGTGTGTGCGGCTGAGGAGGTATCAAAACCGACAGAAGCGTTTGGTTTTGAGCAAGCGACGCGCGAGTACACACTGCAACAGTTCGGAGAGATGGCCGACCAGTTCAAGTCAGATTACTTCAATATGCCTGTACATATGGTCCCAACATCGACAGTGGAGAAAGAATTTTGGCGCGTCGTGTCGTCTATAGACGAGGATGTTACTGTGGAATATGGCGCTGATCTGCACTCAATGGACCATGGTTCTGGTTTCCCCACAAAGACGCACGCACACCTGTACCCGGGCGAGCAGCAGTACGCGGACTCGTCGTGGAACCTCAACAACCTGCCCGTGCTCGAGGGCTCCGTGCTCGGGCACATCAATGCGGATATATCCGGGATGAAGATCCCCTGGTTATACGTGGGCATGTGCTTCGCGACATTCTGCTGGCACAATGAGGATCACTGGAGCTATTCCATCAACTACCTACATTGGGGAGAGCCCAAGACTTGGTATGGAGTACCAAGCTCAAAAGCAGAGCAGTTCGAGGCTGCCATGAAGGCGGAAGCACCTGAACTGTTCCAGTTACAGCCAGATCTGCTGCATCAGCTGGTCACCATCATGAACCCTAATGTTCTCATGAAGGCGGGAGTGCCTGTGTACAGgATGGACCAGCACGCTGGCGAGTTCGTGATCACGTTCCCGCGCGCGTACCACGCAGGATTCAACCAAGGGTACAACTTTGCCGAGGCGGTCAACTTCACTCCTGCGGATTGGTTAAAAATGGGTCGCGAATGCGTCGCCCAGTACTCGACTCTCCGCCGGAACTGCGTGTTCTCACATGACGAGCTGGTCTGCAAGATGGCGCTAGAAGCTGATGGGTTGAGCCTCACCGTGGCACTAGCAGCCTACAGGGACATGAGGACCATGCTGCATGATGAGAGGAAGCTCAGGAAGGGACTGCTGGACTGGGGCGTAACCGAAGCAGAACGCGAAGCCTTCGAGCTCCTACCAGACGACGAACGACAATGTCAACTGTGCAAAACAACGTGCTTCCTGTCGTGCGTGACGTGTGTGTGCACGCCGCACGTCGCGTGCCTGCGGCACTACACGCAGCTGTGCGACTGTCCCGCACACAAACACAAGCTCAGATACCGCTACACCCTCGACGAGCTGCCAGCCATGCTAGAGAAGCTAAAGAAGAAATCCGAGCAGTTCCGAGAATGGGCGGAAGCAGTACAGAACGCGCTCGACCCAGACACGCCCAAGACTTGCGACCTGGACGGGCTCAGGGCGCATCTGAAAAAGGCACATGATCTCAAGATGCACAAAACCGAGCTCGTTCGAGCTTTAGAAACCGCAATAGAAGACGCAGAGAAATGCGCGTCAGTGATCCAACAACTAGACTTGAACAAGATGCGCACGCGCACGCGGCACCACGACCCTAAGTACCGCCTCACTATACACGAACTGACGTTGTTCGCTGCTGAGATTGATGGACTAGCCTGTGTGTTACCTGAAGGTTCAGCAGTAAAAGAAGTGTTACGACAAACATCGGAGTTTGAGAGTCGCGCGACTGACCTACTCAACAAAGATCTAGAGAAGACAGATCAGGCTTACGTCAGGGAATTAGAAGAGACATCAGAACTCGGTTCCCGCCTCTGCATAGTCCTCCCACAACTGCCTCCCTTACAAGCTCGCCTCCAACAAGTGAAGTTCATAGAAGAAGTGCGCGGCTACCGAGAGGACTACTCCACACTGACGCGTGACGTCATCGACAGACTGCTGAGCGACGCGCAGAACGTCGTGCCGCATCACAAGGTGGAGATGGAGAGGTCATTGTTGTTCAAACTGAAAGCTCAAGTAGATGAATGGGAAACCCGTGCCCGCGTGGTCCTCCTCGACACTTCCAAAAACCCTCAAACGGAGCTGGAGCCCCAGTACACGACGCTGTCAGAACTGGACATATTGTTATCTGATGGAGAAGAGATTGAGGCGGCGTTACCGTCCTACCACGCATTACAGACTGCTGTGTCTCATGCTAGGGATTGGCTCAACAAGGTAGAAGAGATGCAATCAAAGGAGCTGTACCCGTACATGCACAGCGTAGAGAACATCGTACGTCGAGGCGCGCACATCCCGCTGGCGCTGTACGAGAAGGACCAGCTGGCGCAGGCGCTGCAGTCGGCCAGGGACTGGGAGCGAGGCGCCGCCGATATGTTCCTCAAGAAGGGACTGGGAGCGAGGCGCCGCCGATATGTTCCTCAAGAAGGTAAGGACCAGCTGGCGCAGGCGCTGCAGTCGGCCAGGGACTGGGAGCGAGGCGCCGCCGATATGTTCCTCAAGAAGGTAAGGACCAGCTGGCGCAGGCGCTGCAGTCGGCCAGGGACTGGGAGCGAGGCGCCGCCGATATGTTCCTCAAGAAGGTAA
Protein Sequence
MPGLPSENDSGVISIGKYCSIADPEAAEVINIQEKQCRTQHASLGDTNRDISIATKECSYLDSLLSAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSSERKWSKVGRRMGFPQGKGIGSILKNHYEKILYRYDIFKNNGTDNKDTDIKVKGEQTPEKASGTRSRSTSKCTAAATPPPARRFKPDPDGPTPADTVPADRTLSQLQEEAMKTPVKEESPETRRSPRENKWMSAAGSCGARSRVTRATRLREHRMSNMTVSVTPAPPSSLALHPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCAAEEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKTHAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVAQYSTLRRNCVFSHDELVCKMALEADGLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCQLCKTTCFLSCVTCVCTPHVACLRHYTQLCDCPAHKHKLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKKAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTSEFESRATDLLNKDLEKTDQAYVRELEETSELGSRLCIVLPQLPPLQARLQQVKFIEEVRGYREDYSTLTRDVIDRLLSDAQNVVPHHKVEMERSLLFKLKAQVDEWETRARVVLLDTSKNPQTELEPQYTTLSELDILLSDGEEIEAALPSYHALQTAVSHARDWLNKVEEMQSKELYPYMHSVENIVRRGAHIPLALYEKDQLAQALQSARDWERGAADMFLKKGLGARRRRYVPQEGKDQLAQALQSARDWERGAADMFLKKVRTSWRRRCSRPGTGSEAPPICSSRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_01440768;
80% Identity
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