Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_012273795.1
Location
CM022550.1:9653708-9711971[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.2e-25 2.7e-21 76.1 0.0 2 89 101 184 100 184 0.94
2 3 6.6 1.9e+04 -3.5 0.1 51 65 1097 1111 1094 1118 0.75
3 3 8 2.3e+04 -4.0 0.0 45 62 1293 1311 1281 1318 0.72

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCCAATGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTCACGTTCACCGTGCCTCCGGAGGCCCCTGTCTTCGAGCCAACGCCTGAGGAGTTCCTGGACCCTTTGGCGTATATTAGCAAAATACGTCCTATCGCCGAGAAATCGGGCATTTGCAAGATAAAACCACCAGCCCACTGGCAACCACCATTTGCAGTGGATGTGGACAGACTAAGATTCACACCACGTATTCAAAGACTAAATGAGTTGGAGGCAATCACCAGAGTTAAGCTGAACTTTTTGGATCAAATCATCAAGTTTTGGGAGCTGCAGGGGTCAGTGTTCAAAATACCAACTGTCGAGAGGAAACCACTTGACTTGTATGCTCTGCATAAGATTGTCAAAGAAGCagGTGGTTTCGAGGTTTGTACAGCAGAACGCAAATGGTCCAAGATTGCCCGGCGCATGGGCCACCCCCAAGGGAAGGGAATCGGCTCCATACTGAAGAGCCATTACGAGAGGATATTGTATCCTTATGACGTGTTCAAGAACAATGGCGCAGTCGGGGACACCAATAAGGAGACTAAAATCGAAGTGAAACAAGAGCAGACCCCCGAAAAGGCCACAACGACCCGCAGTCGTTCGGGGAGTAAATGCGCGGCGACACCGCCTCCAGCGAGGCGGTTCAAAACTGACCCAGAGCCGGCTGCTGAAGGCAGCCATGCCGAGGGCGCCTTGCCGGCCAACGAGGACCATAACCCGATGAAGACCCCTATCAAGGAAGAGCCGAGCCCTGAAACAAGGAGGAGCCCCCGTGAGAATAAATGGATGTCGGCGGCGGGCAGCTGCGGCTCCCGCGCGCGCGTCACGCGCTCCACTCGGCTGCGCGAGCACCGCATGTCCAACATGACAGTGTCCGTCACTCCGGCACCCCCGCACCCTCACATGCTCAATCCCGACGATCCGCTGGCGAAGTACATGTGCCACGTGTGCGGCCGCGGCGACATCGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCCTACCACACGTTCTGCCTGGTGCCGCCGCTGGCCGACGTGCCCAAGGGCGACTGGCGCTGCCCGGTCTGCCTCGCCGAGGAGGTTTCAAAACCAACCGAGGCGTTTGGGTTCGAGCAAGCGTCCCGCGAGTACACGCTCCAGCAGTTCGGCGAAATGGCCGACCAGTTCAAATCTGATTACTTCAACATGCCAGTACATATGGTGCCAACATCAACGGTCGAGAAGGAATTCTGGCGAGTCGTGTCTTCGATTGATGAAGATGTGACAGTGGAGTATGGAGCAGATCTTCACTCCATGGATCATGGATCAGGATTCCCAACAAAATCTAGCGCTCACCTTTATCCAGGTGAACAGCAATATGCGGAGTCCAGTTGGAATTTGAACAATCTACCAGTTTTGGAGGGGTCCGTTTTGGGCCACATCAATGCTGATATTTCAGGGATGAAGGTGCCCTGGCTGTACGTCGGGATGTGCTTCGCGACATTCTGTTGGCACAACGAGGATCATTGGAGCTACTCAATTAACTACTTGCATTGGGGAGAACCAAAGACCTGGTATGGAGTGCCAACCTCGAAAGCGGAGCAGTTCGAGGCCGCGATGAAGGCGGAGGCGCCAGAACTGTTCCAGCTGCAGCCGGACCTGCTCCACCAGCTGGTCACGATCATGAACCCAAATATCTTGATGAAGGCCGGCGTTCCAGTCTACAGGTTGGACCAGCACGCCGGCGAGTTCGTGGTGACGTTCCCGCGAGCCTACCACGCCGGCTTCAACCAGGGCTACAATTTCGCCGAAGCGGTCAACTTCACGCCGGCCGATTGGTTGAAGATGGGCCGCGAATGTATAGCGCACTATTCGACGCTGCGCCGCTACTGCGTGTTCTCGCACGACGAGCTCGTGTGCAAGATGGCGCTGGAGGCGGACGCGCTCAGCCTCGGCGTGGCGCTGGCCGCCTACCGGGACATGAGGACCATGCTCCACGACGAGAGGAAGCTCAGGAAGGGACTGCTGGACTGGGGCGTGACGGAGGCGGAGCGCGAGGCGTTCGAACTGCTCCCGGACGACGAGCGGCAGTGCCACCTGTGCAAGACCACGTGCTTCCTGTCGTGCGTGACGTGCGCGTGCACGCAGCACGTCGCCTGCCTGCGCCACTACGCGCAGCTCTGCGAGTGCCCGCCGCACAACCACCGGCTGCGGTATCGGTATACGATGGACGAGTTGCCGGCGATGCTGGAGAAGCTGAAGAAGAAGTCGGAGCAGTTCCGGGAGTGGGCGGAGGCCGTGCAGAACGCGCTGGACCCGGACACGGCCAAGACCTGTGACCTGGACGGGCTCCGGGCGCACCTCAAGAAGGCGCACGACCTCAAGATGCACAAGACCGAACTGGTGCGCGCCCTGGAGACGGCCATCGAGGACGCGGAGAAGTGCGCGTCGGTGATCCAGCAGCTGGACCTGAACAAgatgcgcacgcgcacgcgccaCCACGACCCCAAGTACCGGCTCACCATCCACGAGCTCACGCTCTTCGCAGCCGAGATCGACGGCCTGGCCTGCGTCTTGCCAGAGGGTTCGGCGGTGAAAGAGGTGCTGAGGCAAACGGCAGAGTTCGAGACGCGCGCAGCGGAGTTGTTGAATACGGACCTAGAGAAAACGGAGGCTAACTATGTCCGAGAACTTGAAGAGGTCGTCGAGGTCGGTTCTCGGCTGTGCATAGTGCTGCCGCAGCTGGCGCCGCTGCAGGCGCGCCTGCAGCAGGCCAAGTTCATCGAGGAGGTGCAGAACTACCGCGACGACTGCGCCACCCTCACTCCAGACGTCATCGAGCGGCTGCTCCAGGACGCCGACAAGGTGGTGCCCCATCACAGGGTCGAGGTGGAGAGAGCTGCTTTATACAAACTTAAGGCCCAAGTGGAAGAGTGGGAGCAGCGCGCCAGGGCTGTCCTGATCGACACCTCCAGGCCGCGGGGCGAGGACGAGCTGGAGCCCCAGTACACGACGCTGGCGGAGCTGGAGGCGCTGCTGGCGGAGGGCGACGAGATCGAGGCAGCGTTGCCGTCGCAGCACGCGCTGCAGGCGGCCGTCGCGCACGCCAAGGACTGGCTGCTCAAGgtgGAAGAGATGCAATCGAAAGACCTCTACCCGTACATGCACAGCGTTGAGGCCCTGGTGAAGCGAGCTCAGCAGATCCCGTTGGCACTCTTCGAGAAGGACCAGCTCGCCTTGGCACTGCAGTCGGCCAAGAAGTGGAAGCAGGGCGCAGCTGAGATGTTTCTTAAACAGAACTGGCCGTACTCGCTGCTGGAGGCGCTCTCCCCCCGGACGGCGGGCTGCGAGGGCGGGTGGGGCGCCCGGCGCCGCGGGCGGCCGCCCTCGGGCGCGGAGCCGCCGCCCTCCTCGCTGGAGGCGGGCCTCTTCCTGCGCAACTTCAGCGAGGACTCCACGCCCACCGAGATCGTCGCCGCCTTCAAGCAGGCCGAGCACCGCGAGCTCGTCGCCATCAAGGAGTTGAGggCTCGCAACATGCGCAAAGAAGTGCGTGGAGCGCCGACGGCGAATGTCACTTTCTGCGTCTGCCAGAAGAGGCAGTACGGCGTGATGACCCAGTGCGAGCTCTGCAAGGATTGGTTCCATGCTTCGTGTATAACAGCGGCGAAAGAGGAACGCGAAGAGTCACCGGATCGCGTGGACATGCCTTTCCCTAATGCTGAACCCAAATTCCTTTGCCCCGATTGTATGAGGACCAAACGACCGAGACTGGACAGAATTCTGGCTTTACtgGTGTGGCTGCAGAACCTGCAAGTGCGGCTGGCCGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCGATGGCCTGGCAGGACGCCGCCAGGGCCATGCTGGCCAGCCCGCTGCTGGCCACGCTGCCGGCGCACGAGTACCTCGACAGGGCGCAGGCCAACAGAGAGAAAGCGGATAAATTGAATGCGGAATTGAAGAAGGCCACGGGGCGAGCTCACGACGCGCACTTGTCACAAAATCCTAGGTCATCAGCGAGCGTGGAGCATGCGTACAGCGCGACCCCCGTGTCGCCAGGAACAAGAGTAGCTCCCGGTTTATTACAGAAGTTAGAAGATCTTATGCTGGAAGGGGATTTACTTGAAGTGCGGCTGGAGGAGCAGGCGTCGATGTGGGGCGCCGTGGTGGCGGCGCGGGGCGCCGACGGGCGCCGCGGCGCGCGCGTGCTGGACGCCGGCCGCCGCAAGCGCCAGCGGCAGCCGCGCCACCACCACCAGGTCAAGCGCACGCGCACCAGGCCCCACCACGACATTGATATTGTCAACGACACAGTACGGAGTAAAGCGACAGGGCCACCACCAGCAAAAGCTACGATAAAAAGAGGTTCAGCGACAACCACGAATTATCTCAATAGGAAACAGGGTATGTCTTCGGGGTCTGGGCTGATGATGCGCAAACATTACATGGCGCGGCAGGAGAGGCGCAAAAGGGGACTCACAGCCCCACCAGGGGGAAGCACCCACGACAGACCAGACTAG
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVFKIPTVERKPLDLYALHKIVKEAGGFEVCTAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKNNGAVGDTNKETKIEVKQEQTPEKATTTRSRSGSKCAATPPPARRFKTDPEPAAEGSHAEGALPANEDHNPMKTPIKEEPSPETRRSPRENKWMSAAGSCGSRARVTRSTRLREHRMSNMTVSVTPAPPHPHMLNPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPTSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRLDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADALSLGVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCHLCKTTCFLSCVTCACTQHVACLRHYAQLCECPPHNHRLRYRYTMDELPAMLEKLKKKSEQFREWAEAVQNALDPDTAKTCDLDGLRAHLKKAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFETRAAELLNTDLEKTEANYVRELEEVVEVGSRLCIVLPQLAPLQARLQQAKFIEEVQNYRDDCATLTPDVIERLLQDADKVVPHHRVEVERAALYKLKAQVEEWEQRARAVLIDTSRPRGEDELEPQYTTLAELEALLAEGDEIEAALPSQHALQAAVAHAKDWLLKVEEMQSKDLYPYMHSVEALVKRAQQIPLALFEKDQLALALQSAKKWKQGAAEMFLKQNWPYSLLEALSPRTAGCEGGWGARRRGRPPSGAEPPPSSLEAGLFLRNFSEDSTPTEIVAAFKQAEHRELVAIKELRARNMRKEVRGAPTANVTFCVCQKRQYGVMTQCELCKDWFHASCITAAKEEREESPDRVDMPFPNAEPKFLCPDCMRTKRPRLDRILALLVWLQNLQVRLAEGEALQCVTERAMAWQDAARAMLASPLLATLPAHEYLDRAQANREKADKLNAELKKATGRAHDAHLSQNPRSSASVEHAYSATPVSPGTRVAPGLLQKLEDLMLEGDLLEVRLEEQASMWGAVVAARGADGRRGARVLDAGRRKRQRQPRHHHQVKRTRTRPHHDIDIVNDTVRSKATGPPPAKATIKRGSATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLTAPPGGSTHDRPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
-
80% Identity
-