Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_947859365.1
Location
OX402070.1:721263-779015[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.3e-24 1.6e-20 73.9 0.0 2 89 39 122 38 122 0.93

Sequence Information

Coding Sequence
ATGCCTTTGTTTTGGCTACAGCATTGGCAGCCGCCATTTGCCGTGGACGTGGACCGTCTCCGTTTCACGCCGCGGATACAGCGGTTAAATGAGTTAGAGGCTATTACCCGAGTAAAGCTCAACTTTTTGGATCAAATCATGAAGTTCTGGGAGCTCCAGGGATCTGTCCTGAGGATCCCCACCGTCGAGAGGAAACCCCTCGACCTCTATTCCTTGCACAAGATTGTCAAAGAAGCCGATGGGTTCGAGGCGTGCTCGGCGGAGCGCAAATGGTCAAAGATCGCGCGGCGCATGGGCCACCCGCAAGGCAAGGGCGTCGGATCCATCCTCAAGAACCACTACGAGCGGATACTGTACCCGTACGACGTATTCAAGAACAGCGGCGCTATCGCCGACACCAAGGAAACGAAGATCGAAGTGAAAGGCGAGGTGACTCCAGAGAAAGCCAACACCACCCGCAGCCGCTCCAACTCGAAGTGTCCGGCGGCGACGCCGCCCCCGGCGCGCCGGTTCAAGCCCTCCGACCCCGAGCCGGCCGCCGAGGGCAGCCACACCGAGGGGGCGCTGGCGGGCGCCGACGAGGCCAGGACGCCCGTCAAGGAGGAGAAGAAGGAGGAGAAAGAGAACGGGGAGCAGCGGCGTAGCCCGCGCGAGAACAAGTGGATGTCAGCCGCGGGCAGCTGCGGCGCGCGCGCACGCGTCACGCGCTCCACGCGCCTGCGCGAGCACCGCATGTCCAACATGACCGTGTCCGTCACGCCCGCGCCGCCCGCGCCGCCCAGCGGCAAGACTGAGCACGTGCTCGACCCGCTGGCAAAGTACATGTGCCGCGTGTGCGGGCGCGGCGACATCGAGGAGCAAATGCTGCTCTGCGACGGCTGCGACGACTCGTACCACACGTTCTGCCTCGTGCCGCCGCTCGCGATCGTGCCTAAAGGGGACTGGCGCTGCCCCGTCTGTCTCGCTGAAGAGGTGTCGAAGCCGACGGAAGCCTTCGGGTTCGAGCAGGCGTCGCGCGAGTACACCCTTCAGCAGTTCGGCGAGATGGCTGACCAGTTCAAGTCGGACTACTTCAACATGCCGGTCCATATGGTGCCTACGCATACCGTGGAGAAGGAGTTTTGGCGCATCGTGTCCTCGATAGACGAGGATGTCACCGTTGAGTATGGTGCGGACTTGCACTCGATGGACCATGGATCAGGGTTCCCGACCAAGTCTAGCATGCACTTATATCCCGGCGAACAGCAGTACGCGGAGTCCAGTTGGAACCTGAACAACCTGCCCGTGCTAGAGGGGTCCGTGCTTGGGCACATCAATGCGGATATATCTGGGATGAAGGTCCCCTGGCTCTACGTGGGAATGTGTTTCGCGACGTTCTGCTGGCACAACGAGGACCACTGGAGCTATTCCATCAACTACCTGCATTGGGGCGAACCCAAGACCTGGTACGGCGTGCCGGGGTCGAAGGCGGAGCAGTTCGAGGCGGCCATGAAGGCCGAGGCTCCTGAGCTATTCCAGTTGCAGCCGGACCTGCTGCATCAGCTCGTCACCATCATGAACCCCAACATCCTGATGCGCGCCGGCGTGCCCGTCTACAGGACGGACCAGCACGCCGGGGAATTCGTGATAACGTTCCCGCGAGCGTATCACGCCGGTTTCAACCAGGGATACAACTTCGCCGAGGCCGTCAACTTCACGCCAGCTGACTGGCTCAAAATGGGTCGCGAGTGCATCGCGCACTACTCTACCCTGCGGCGTTACTGCGTGTTCTCGCACGACGAGCTCGTCTGCAAGATGGCGCTGTCCAGCGACGCGCTCAGCGTCGGCGTCGCCTTCGCCGCCTACCGGGACATGCGGACCATGCTGCACGACGAACGGAAACTGAGGAAACAGCTGCTGGACTGGGGCGTGACGTCAGCGGAGCGCGAGGCATTCGAGCTCCTGCCCGATGACGAGCGGCAGTGCGCGCTTTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCGCGTGCTCGCGCCGCGTCGCCTGCCTGCGCCACCACGCGGCGCTGTGCGCGTGCGCGCCGCACCACCACACGCTCAGATACCGATACACCCTAGACGAGCTCCCGGCGATGCTGGAGAAGCTGAAGAAGAAGTCGGAAGCGTTCCGGGAGTGGGCGGAGGCCGTCCAGAACGCGCTCGACCCGGACACGCCCAAGACCTGCGACCTGGACGGTCTGCGCGCGCACCTCAAAAGGGCTCATGATCTCAAGATGCACAAATCCGAGCTCGTCCGCGCGCTCGAGACCGCGATCGAGGACGCGGAGAAGTGCGCCTCCGTGATCCAGCAGCTGGACCTGAACAAGATGCGCACGCGCACGCGCCACCACGACCCCAAGTACCGGCTCAGCGTGCACGAGCTGACGCTCTTCGCGCAGGAGATCGACCAGCTGGCCTGCGTGCTGCCCGAAGGGTCGGCAGTAAAGGAGGTGTTGCGTCAGACGGCGGAGTTCGAGACCCGCGCAACGGAGCTGCTCAACGCCGAACTGGATCAGACTGACCCCGGCCTGGTCAGGGACCTCGAAGAGGTGGTCGAACTCGGCACGCGGCTCTGCATAGTGCTGCCCCAACTGCCGCCGCTCCAATGCCGGCTGCAGCAAGTCAAGTTCCTGGAGGAAGTGAGGACGTACCGCGAGGACTACGCCACGCTCACGCCCGATGTCATCGACCGGCTGCTCCAGGAGTCGGAGACCATCGTGCCGCACCACAAGACTGAGGTTGAGAGGGCTCAGCTGTACAGGCTGAAGGCGGAAGTAGAAGAATGGGAGGCGAAAGCTCGCAAAATACTGATCGACCCGAGCAAGCCGGCGGCTGACCCGCCCGTACACACGACGCTGGCCGAAGTGCAGATACTGCTGGACGCGCGGGAGGACATCGAAGCGGCGCTGCCCTCGCACCACGCGCTCAGCCACGCGCACCAGCACGCGCTGGACTGGCTGGCCAAGGTGGAAGAGATGCAGTCCAAGGACCTGTACCCGTACATGCATAGCGTGGAAGCGCTGGTGCGCCGCGCCCAGCAGATACCTTTGGCGCTGTACGAGAAGGATCAGCTGTCTGCCGCGCTCGTGTCTGCCAAGGAGTGGAAGCGCGGCGCTGGAGACATGTTCCTGAAGAAGAACTGGCCGTACTCCCTCCTGGAGGCGCTGTCGCCGCGCACGGAGGGCGGCGCCGTGCGGCGGCGCGCGCGCGGCTCGGCCGAGCCGGCGCCGTCCTCGCTAGAAGCGGGGCTGTTCCTGAGGAACTTCAGCGAGGACTCCACGCCCACAGAGATCGTGCACGCGTTCAAGCACGCTGAGCAGAGAGAGCTCGCGCTCATCAAGGAAATCAGAGCCCGCAACATGCGCAAGGAGGTGCGCGCGCCGCCGGCGCCCGGCGTCAGCTTCTGCGTGTGCCAGAAGCGGCAGTACGGCGTCATGACGCAGTGCGAGCTCTGCAAGGACTGGTTCCACGCGACGTGCATCACGGCGGCGAAGGAGGAGCGGGCGGAGTCCGAGGAGCGCGTGGAGCTGCCGTTCCCCGCGCCCGAGCCCAAGTTCCTGTGCCCCGACTGCACGCGCACGCGCCGCCCGCGCCTCGACCGGATACTTGCACTGCTGGTGTGGCTGCAAAAGCTGCCAGTCCGGCTGGCGGAGGGCGAGGCGTTACAGTGCGTGACGGAGCGCGCCATGGCCTGGCAGGACGCCGCGCGCGCTGCGCTGGCGCACCCCGCGCTCGCGCAGCTGCCGCCCGCCGAGCGGGACCGCGCACAGGCGAACAGAGAAAAAGCGGACAAACTGAACGCGGAATTGAAGAAAGCTACCGGACGAGCTCACGACGCACATTCATCACAAAATGCGAGGTCTTCAGCGAGTGTGGAGCATGCGTACAGCGCGACGCCGCGTTCGCCCAGCGCGCGCGTCGCTCCCGGCCTGCTGCAGAAGCTGGAGGACTTGATGCTGGAAGGGGATTTACTCGAGGTGAAACTGGAGGAGCAAGCGCAGATGTGGAGCTGTGTGATGGCGGCGCGCGGCGCGTGCGGGCGGCGCGTAGCTCGCGTGCTGGACGCGGGCCGTCGCAAGCGCGCCCAGCGCACGCCACGCCCTCACTCGCAGCTCAAGCGGAAGCGGCCGCACGGTTCCGTGGCGCCACCAAAAGCTACCGTCAAACGTGGCACGGCCACGACGACGAATTATCTCAACAGAAAACAGGGAATATCGTCAGGCTCCAGTCTGATGATGCGCAAACACTACATGGCGCGGCAGGAACGCCGCAAGCACTCGACGCGGGGGAAGCACGCGCGGCAAGCGAGGCTCGCGGGCAGCGCGCGAGGCGCGGCGGCGGCGCGGGGCGCGCGCGCGGCGGCCACCGCGGCCAACGCCACCAGCTCGTCCTCGCAGTCCTCGGGGGAAGACGAGGAGGACTGCGCAGCCGCCTCCTGCCGCAGACCCACTGGCAAAGTGGACTGGGTGCAGTGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTGGGCCTCTCCCGCGCCGCGCTGCGCGAGGACGATGACTACGTCTGCGGCGCGTGCGCGGCGCGCCGCCAGCGGAACGCGTAA
Protein Sequence
MPLFWLQHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIMKFWELQGSVLRIPTVERKPLDLYSLHKIVKEADGFEACSAERKWSKIARRMGHPQGKGVGSILKNHYERILYPYDVFKNSGAIADTKETKIEVKGEVTPEKANTTRSRSNSKCPAATPPPARRFKPSDPEPAAEGSHTEGALAGADEARTPVKEEKKEEKENGEQRRSPRENKWMSAAGSCGARARVTRSTRLREHRMSNMTVSVTPAPPAPPSGKTEHVLDPLAKYMCRVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLAIVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTHTVEKEFWRIVSSIDEDVTVEYGADLHSMDHGSGFPTKSSMHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMRAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALSSDALSVGVAFAAYRDMRTMLHDERKLRKQLLDWGVTSAEREAFELLPDDERQCALCKTTCFLSCVTCACSRRVACLRHHAALCACAPHHHTLRYRYTLDELPAMLEKLKKKSEAFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKSELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSVHELTLFAQEIDQLACVLPEGSAVKEVLRQTAEFETRATELLNAELDQTDPGLVRDLEEVVELGTRLCIVLPQLPPLQCRLQQVKFLEEVRTYREDYATLTPDVIDRLLQESETIVPHHKTEVERAQLYRLKAEVEEWEAKARKILIDPSKPAADPPVHTTLAEVQILLDAREDIEAALPSHHALSHAHQHALDWLAKVEEMQSKDLYPYMHSVEALVRRAQQIPLALYEKDQLSAALVSAKEWKRGAGDMFLKKNWPYSLLEALSPRTEGGAVRRRARGSAEPAPSSLEAGLFLRNFSEDSTPTEIVHAFKHAEQRELALIKEIRARNMRKEVRAPPAPGVSFCVCQKRQYGVMTQCELCKDWFHATCITAAKEERAESEERVELPFPAPEPKFLCPDCTRTRRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARAALAHPALAQLPPAERDRAQANREKADKLNAELKKATGRAHDAHSSQNARSSASVEHAYSATPRSPSARVAPGLLQKLEDLMLEGDLLEVKLEEQAQMWSCVMAARGACGRRVARVLDAGRRKRAQRTPRPHSQLKRKRPHGSVAPPKATVKRGTATTTNYLNRKQGISSGSSLMMRKHYMARQERRKHSTRGKHARQARLAGSARGAAAARGARAAATAANATSSSSQSSGEDEEDCAAASCRRPTGKVDWVQCDGGCDQWFHMHCVGLSRAALREDDDYVCGACAARRQRNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
-
80% Identity
-