Basic Information

Gene Symbol
Kdm5
Assembly
GCA_033884665.1
Location
CM066631.1:571506-598546[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-10 6.4e-07 30.3 0.0 43 89 8 51 3 51 0.89

Sequence Information

Coding Sequence
ATGAAGCATGAAAGGGTACTTTTGGGTGGTTTCGAGGTATGTTCCGCGGAAAGAAAATGGTCGAAGATAGCACGTCGTATGGGCCACCCTCAAGGGAAGGGGATAGGATCCATCCTCAAGAGTCACTACGAGCGGATCCTCTACCCCTACGATGTGTTCAAGAACAGCGGCACCATGGGAAGCGGAACGGATAGTAAAGAGACGAAAATCGAAGTAAAAGGCGAGCAGACGCCAGAGAAGGCAGGGCGTAGGTCGAGCAAGCCGCCGGCCGCGacgccgccgcccgcgcgccGCTACAAGAGCTCCGAGCCCGAGCCCGCCGAGGGCAGCCACACTGAGGGGGCTCTGCCCTCCACGGACGATAAGAAGACCCCCATCAAGGAAGAACCAGGGGAGACCAGACGgaGTCCGCGCGAGAACAAATGGATGTCGCAGCCGGGCAGCTGCGGGGCGCGCGCGCGCGTGCTGCGCTCCACGCGCCTGCGCGAGCACCGCCTCTCCAACATGACGGTGTCGGTgacgcccgcgccgccgccgctgcACCCGGACGACCCGCTGGCGAAGTACATGTGCCACGTGTGCGGGCGCGGCGACATCGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCCTACCACACCTTCTGCCTCGTGCCGCCGCTCGCCGACGTGCCCAAGGGCGACTGGCGCTGCCCCGTCTGCCTCGCCGAGGAGGTATCAAAGCCGACGGAAGCGTTCGGGTTCGAACAGGCGAGCCGCGAGTACACGCTGCAGCAGTTCGGCGAAATGGCCGACCAGTTCAAGTCTGACTACTTCAATATGCCCGTACATATGGTGCCAACATCCACGGTAGAGCGCGAGTTCTGGCGCGTTGTGTCTTCCATAGACGAGGACGTGACTGTCGAGTACGGGGCTGATCTACACTCTATGGACCATGGATCTGgttTCCCAACAAAATCCAGTGCACATTTGTATCCGGGTGAACAGCAATATGCTGAGTCTAGCTGGAATTTAAACAACCTACCTGTTCTGGAGGGTTCTGTGTTGGGACACATTAACGCTGACATATCAGGGATGAAGGTCCCATGGCTGTATGTCGGCATGTGCTTTGCAACGTTCTGCTGGCATAACGAAGACCATTGGAGTTACTCCATCAATTACTTACATTGGGGCGAGCCTAAGACTTGGTACGGAGTGCCGAGCTCCAAAGCAGAGCAGTTCGAGGCGGCGATGAAGGCGGAGGCGCCGGAGCTGTTCCAGCTGCAGCCGGACCTGCTGCACCAGCTCGTCACCATCATGAACCCCAACGTGCTCATGAAGGCCGGGGTGCCCGTCTATAGGACGGACCAGCACGCGGGCGAGTTCGTGATCACGTTCCCGCGCGCCTACCACGCCGGCTTCAACCAGGGGTACAACTTCGCGGAGGCCGTCAACTTCACGCCCGCCGATTGGCTAAAAATGGGTCGCGAGTGCATCGCGCACTACTCGACGCTGCGCCGCTACTGCGTGTTCTCGCACGACGAGCTCGTGTGCAAGATGGCGCTGGAGGCGGACGCGCTGTCGCTGACCGTGGCGCTGGCCGCCTACCGCGACATGCGCGCCATGCTGCACGACGAGCGCAAGCTCAGGAAGGGACTGCTGGACTGGgGCGTAACGGAGGCGGAGCGCGAGGCGTTCGAGCTGCTGCCGGACGACGAGCGCATCTGCCACGAGTGCAAGACCACGTGCTTCCTGTCGTGCGTGACGTGCGCCTGCACGCCGCACGTGGTGTGCCTGCGCCACCACGACCGCCTCTGCGCCTGCCCGCCGCGCCACCACCGGCTCAGATATCGCTACACGCTAGACGAGCTGCCCGCCATGCTGGAGAAGCTGAAGCGCAAGTCGGAGCAGTTCCGCGAGTGGGCGGAGGCTGTGCAGAACGCGCTGGACCCGGACACGCCCAAGACTTGCGATCTAGATGGACTTAGGGCTCATCTGAAGAGGGCTCATGATTTGAAGATGCACAAGACGGAGCTGGTGCGCGCGCTGGAGACGGCCATCGAGGACGCGGAGAAGTGCGCGTCGGTGATCCAGCAGCTGGACCTGAACAAgatgcgcacgcgcacgcgccaCCACGACCCCAAGTACCGCCTCTCCATACACGAGCTCACGCTCTTCGCGGCCGAGATCGACGGGCTCGCCTGCGTGCTGCCCGAAGgTTCAGCAGTGAAAGAAGTTTTACGACAAACAGCGGAATTCGAAGACCTGGCTACGGAAATATTGAGTAAAGAACTCGATGAATGTGACGCAGCTTCCGTCAGGGAGTTAGAAGAAGTGGTAGACCTCGGATCGCGCCTCTGCATCGTCCTGCCGCACCTGTCAGCACTGCAGGCGCGGCTTCAGCAGGAGAAGTTCGTGCTGTCGGTGCGCGCGCACCGCGAGGACTGCTCCACGCTCACGCCCGAAGTCATAGACAAGCTACTGGCTGAGGCGGAGACGGTGGTGCCTCACCGACGTGTCGAGATCGAGAGGGCTACCTTGTATAAGCTTAAATTGCAAGTAGAGGACTGGGAGCGACGTGCCAAGGCCATCCTTGTGGATACAAAGGATACAGGCGCAACTGCGGGAAAGTCCCGGGACTCGGAGTCCACCTCGGAGTCAGAGGAACACATAACACTGGCTGAGCTGGACGCACTCCTCGCGGAGGGAGAGGATATAGAGGCCGCCCTGCCTTCCCATCATGCGCTGCATACTGCCGCTACGCATGCAAGGGATTGGCTTGCTAAGGTGGAGGAGATGCAGTCGAAGGAGCTGTACCCGTACATGCACAGCGTGGAGGCGctggcgcggcgcggcgcggcgctgcCGCTGGCGCTGCTGGAGAAGCGCCAGCTGGCCGCCGCGCTGGCTTCCGCGCGCGACTGGCAGCAGGGTGCCGCAGACATGTTCCTCAAGAAGAACTGGCCATACTCTCTCCTGGAAGCACTGTCCCCGCGCACAGAGTGCGGGCCCACGGGCCGGCGCCGCGGCCGCGGGGACGCGCCCGAGGCGGGGCTGCTCAAGCACTTCAGCGAGGACGCGACGCCCACGGAGATCGTGGCGGCGTTCAAGCAGGCGGAGCAGAGGGAGCTGGCTGCTATTAAAGAATTAAGGACAAAGAATATGCGTAAAGAAGTGCGTGCGCCGCCCACCGCCGGCGTCACGTTCTGCCTCTGCCAGAAGAGGCAGTACGGGGTCATGACGCAGTGCGAGCTGTGCAAGGATTGGTTCCATGCGTCATGCGTAGCATCAGCCCGCGAGGATACGGAGGATAGAGAGGAGTCACCGGACAGGATAGAGCTGCCATTCCCCTGCACTGAGACCAAGTTCCTCTGCCCGGACTGTACACGGACCAAGCGGCCACGCTTACATCGGATATTGGCCTTATTGGTGTGGCTGCAGAAGCTGCCCGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGacgcggcgcgcgcgctgctGGCCGCGCCCGCGCTGGCCGCGCTGCCGCCGCGCGACCGCCGCGACCGCCGCGACCGCGACCGCGACCGCGACCTGCCCGCGCACAGATCATCAGCGAGCGTGGAGCACGCGTACAGCGCGACGCCGCGCAGCGCCGCCGCGCGCGTGGCGCCCGCGCTGCTGCAGAAGCTGGAGGACCTCATGCTGGAGGGGGACCTGTTGGAGGTGCGGCTGGAGGAGCAGGCGGCGGTGTGGAGCGCGGTGTGCGCGGCGCGCGCGGGCGAGGGCCGGCGCGCGCCGCGCGTGCTGGATGCCGGCCGCCGCaagcgcgcgccgccgcccgcgcgcgCCAAGCACCACCCGCTCAAGCGCACGCGCCCGCTGCACGgcACAAGTACCACTAAAACAACGATAAAAAGAGGCTCAGCGACTACGACGAATTACTTAAATAGAAAACAGGGAATGTCGTCGGGCTCGGGGCTGATGATGCGCAAACACTACATGGCGCGCCAGGAGCGCCGCAAGCGGGGCCTGCCCGCGCGCCACCACGCCCGCCAGTCGCGTCTGGCACAAACTCGCGCGACGCTCACCAGCAGCCGCGCGGCCATGCGCAGCGCGGCCACCTCGGCGCGCCGCTCCTCCTCCTCCTCCCACTCCTCGGCTGATGATGACGAGGACTGCGCCGCCGCCGCCTGCTTGCGCCCTACTGGTAAGGTGGACTGGGTTCAGTGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTAGGCCTCAGCCGGGGCGCGCTCAGGGAAGACGACGACTACGTGTGCGGCTCCTGCGCCGGACAACGTACACGACATTGA
Protein Sequence
MKHERVLLGGFEVCSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKNSGTMGSGTDSKETKIEVKGEQTPEKAGRRSSKPPAATPPPARRYKSSEPEPAEGSHTEGALPSTDDKKTPIKEEPGETRRSPRENKWMSQPGSCGARARVLRSTRLREHRLSNMTVSVTPAPPPLHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADALSLTVALAAYRDMRAMLHDERKLRKGLLDWGVTEAEREAFELLPDDERICHECKTTCFLSCVTCACTPHVVCLRHHDRLCACPPRHHRLRYRYTLDELPAMLEKLKRKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDLATEILSKELDECDAASVRELEEVVDLGSRLCIVLPHLSALQARLQQEKFVLSVRAHREDCSTLTPEVIDKLLAEAETVVPHRRVEIERATLYKLKLQVEDWERRAKAILVDTKDTGATAGKSRDSESTSESEEHITLAELDALLAEGEDIEAALPSHHALHTAATHARDWLAKVEEMQSKELYPYMHSVEALARRGAALPLALLEKRQLAAALASARDWQQGAADMFLKKNWPYSLLEALSPRTECGPTGRRRGRGDAPEAGLLKHFSEDATPTEIVAAFKQAEQRELAAIKELRTKNMRKEVRAPPTAGVTFCLCQKRQYGVMTQCELCKDWFHASCVASAREDTEDREESPDRIELPFPCTETKFLCPDCTRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLAAPALAALPPRDRRDRRDRDRDRDLPAHRSSASVEHAYSATPRSAAARVAPALLQKLEDLMLEGDLLEVRLEEQAAVWSAVCAARAGEGRRAPRVLDAGRRKRAPPPARAKHHPLKRTRPLHGTSTTKTTIKRGSATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLPARHHARQSRLAQTRATLTSSRAAMRSAATSARRSSSSSHSSADDDEDCAAAACLRPTGKVDWVQCDGGCDQWFHMHCVGLSRGALREDDDYVCGSCAGQRTRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_00621003;
80% Identity
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