Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_905404155.1
Location
FR989926.1:8091159-8116336[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-25 1.8e-21 76.7 0.0 2 89 101 184 100 184 0.93

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACATTCACCGTCCCTCCGGAGGCCCCAGTCTTCGAGCCCACCGTCGAAGAGTTCCAGGACCCTCTGGCGTACATCAGCAAAATAAGACACATCGCAGAAAAATCAGGCATTTGCAAGATAAAACCCCCCGCACATTGGCAGCCACCGTTTGCTGTGGATGTTGACCGTTTACGGTTCACTCCAAGGATACAGAGATTAAATGAATTGGAGGCAATTACAAGGGTGAAACTGAATTTCCTGGATCAAATAATAAAGTTTTGGGAGCTACAGGGTTCGGTGTTAAAGATACCCACTGTAGAGAGGAAACCACTGGATTTGTACGCACTACACAAGCTTGTAAAGGAGGCTGGTGGATTCGAAGTATGTTCTGCGGAGAGGAAGTGGTCGAAAATAGCGAGGCGCATGGGCCACCCCCAGGGGAAAGGAGTCGGTTCCATACTGAAGAATCACTACGAGAGAATACTCTACCCGTACGACGTGTTCAAGAACAACGGTGTACTCACCGATAATAAAGAGACAAAAATAGAGGTGAAAAGCGAACAGACCCCCGAGAAGGTGGGTCGGCGGTCGAGCAGCAAGCCACCCGCGACGCCCTCGCCTGCGCGCCGCTACAAGAGCGCGGAGCCCGAGCCGGCTGAGGGGTCGCACACCGAGGGGGCTCTGCCCTCCGACACCAAGACCCCGATCAAGGAGGAGCCCGGAGAGACTCGTAGAAGTCCGAGAGAGAACAAATGGATGTCGTCGGCGGGGAGCTGCGGGGCGCGCGCCCGGGTGCTCCGCTCCACCAAACTCAGGGAACACCGTCTGAGCAACATGACAGTGTCCGTCACACCGGCACCGCCAGTTATTAGTCCTGATGACCCGCTGGCCAAGTACATGTGTCACGTGTGCGGGCGCGGCGACGTGGAGGAGCAGATGTTACTGTGTGACGGCTGCGACGACTCCTACCACACGTTCTGCTTGGTACCGCCGCTGGCTGACGTGCCCAAAGGAGACTGGAGATGCCCCGTGTGTCTTGCTGAGGAGGTATCTAAACCAACTGAAGCGTTTGGTTTCGAACAAGCGAGCCGCGAGTACACACTGCAACAATTTGGAGAGATGGCGGATCAATTCAAGTCAGATTATTTCAACATGCCTGTACATATGGTACCAACGTCGGCTGTTGAACGTGAGTTCTGGAGAGTAGTTTCTTCCATTGATGAGGATGTGACGGTCGAATATGGAGCTGATCTTCACTCGATGGACCATGGTTCAGGTTTTCCAACCAAGTCGAGTGCACACCTGTATCCCGGAGAGCAACAGTATGCGGAGTCCAGCTGGAATCTAAACAATCTGCCTGTGCTGGAGGGCTCCGTACTGGGACATATCAACGCGGACATATCTGGAATGAAGATACCGTGGCTGTATGTGGGTATGTGCTTCGCTACTTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCTATCAACTATCTGCACTGGGGCGAACCGAAAACTTGGTATGGAGTCCCAAGCTCGAAGGCTGAACAGTTTGAGGCCACAATGAAGGCTGAAGCTCCCGAGCTGTTCCAACTGCAGCCGGATCTGCTACATCAGTTGGTGACCATCATGAACCCGAATGTGCTGATGAAGGCCGGAGTTCCTGTTTACAGATGTGATCAAAATGCTGGAGAGTTTGTTATTACTTTTCCTCGCGCGTACCACGCTGGGTTTAACCAAGGATACAACTTTGCTGAGGCTGTCAACTTTACACCTGCTGATTGGCTAAAAATGGGTCGCGAGTGCATATCCCACTACTCGACGCTGCGTCGCTACTGCGTGTTCTCACACGACGAGCTCGTGTGCAAGATGGCGTTGGAGGCGGAGTCTCTCACGCTGACGGTCGCGCTGGCGGCGTACCGCGACATGCGTACCATGCTGCACGACGAACGCAAACTGCGGAAGGCGCTGTTGGATTGGGGTGTGACGGAAGCGGAGCGTGAGGCTTTCGAGTTGCTGCCGGACGACGAGCGTCAGTGTCACGAGTGCAAGACGACGTGCTTCCTGTCGTGCGTAACGTGCGCGTGCACGCCGCACATCGCGTGCCCGAGACACTATAGTACGCTGTGCTCGTGCCCGCCGGCGCTGCATAAACTGAGATATCGTTATACACTGGACGAGTTGCCTGCCATGTTGGAGAAGTTGAAACGCAAGTCGGACCTGTTCCGCGAGTGGGCGGAGGCGGTGCAGAACGCACTGGATCCGGACACACCCAAAACGTGCGATTTGGACGGACTGCGCGCGCATCTCAAGCGGGCACATGATCTCAAGATGCACAAAACGGAGCTGGTACGCGCATTAGAAACCGCAATCGAGGACGCGGAGAAGTGCGCGACAGTCATCCAGCAGCTTGACTTGAACAAGATGCGCACGCGCACCCGCCACCACGACCCCAAGTACCGGCTGACCGTGCACGAGTTGACGCTCTTTGCGGCAGAGATTGACGGCCTGGCGTGCGTGTTACCTGAGGGTTCTGCTGTAAAAGAAGTTCTACGTCAGACTGAAGAATTCGAAGATCGAGCAACTGATTTGTTGAATAAAGATCTGGATGATACAGACGCAGCTTATGTCAAGGATTTGGAAGAGGTGTGCGACCTCGGCGGGCGTCTATGCATCGTGCTGCCGCAACTGGCGGCGCTGACGGCCCGTGCGGCGCAGGCGCGTTGGCTGTTAGACGCACGGGACTCGCGCGCCGCCGCGCCGTCGCCCGCGCAAATCGAGAAGTTGTTACAAGACGCAACGACACTAGTACCGCACGCGCGGCTAGAGCCCGAGCGAGCTGAACTGCAAAAGCTACGCTTGCAAATAGAGGACTGGGAGGCTCGAGTGAAGGCGGTACTCATCGAGCCCAATTCTGTCAAGCCGGAGCCGAGCGATGACGCCGAACCGCAGCATACGACGTTGGCCGAACTAGAGACGCTCCTAGCCGAGGGAGACGATATCGACGCTACGTTGCCGTCGCATCACGCGCTGCATACGGCTATATCGCACGCCAAAGATTGGCTGTCTAAGGTGGAAGAGATGCAGTCAAAGGAGTTATACCCGTACATGCACAGTGTGGAGGCGCTAGTGCGACGTGGCTCGCAGATCCCGCTAGCTCTGTATGAGAAGGACCAACTAGCCGCTGCGCTACACTCAGCACACGAGTGGAAACGCGGTGCCGCCGAGATGTTCTTGAAGAAGAACTGGTCGTACTCTCTCCTGGAGGCGTTGTCCCCTCGTGCCGGTCCCGCCGAGGGTACCGGTCGGCGGCGCGGGCGCGGGGAGTGCTCCGCGGCCCTATTGGAACACTTCAGCGAAGACGCGTCGCCAACTGAGATCGTTGCAGCGTTCAAGAACGCCGAACAAAAGGAACTGGCTTATGTGAAGGAGCTAAGAATCCGCAATCTACGAAAGGACGTGTGCGCACCGCCAGCCGCTGGCCTGACGTTCTGTACGTGTCAGAAACGCCAGTATGGCGTTATGTCGCAGTGCGAAATATGCAAGGACTGGTTCCACGGCGACTGCGCGGCGGCGCGCGGCGGCGGCGCGGCGGCGCGGCGCGGGTGGGGTGGTGTGATTGTCATGTGGGCGCGACTGACTGCGCTTCGTTCGCAAATCGCACCGCATGAACAGCGGCAACGTCGCGTCGCGGTCTCCCGACTTTTAATATTAATAAGTGACACTTGA
Protein Sequence
MGKCDEANVEVNMGDSASPMKPDNFTFTVPPEAPVFEPTVEEFQDPLAYISKIRHIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKLVKEAGGFEVCSAERKWSKIARRMGHPQGKGVGSILKNHYERILYPYDVFKNNGVLTDNKETKIEVKSEQTPEKVGRRSSSKPPATPSPARRYKSAEPEPAEGSHTEGALPSDTKTPIKEEPGETRRSPRENKWMSSAGSCGARARVLRSTKLREHRLSNMTVSVTPAPPVISPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSAVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEATMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRCDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECISHYSTLRRYCVFSHDELVCKMALEAESLTLTVALAAYRDMRTMLHDERKLRKALLDWGVTEAEREAFELLPDDERQCHECKTTCFLSCVTCACTPHIACPRHYSTLCSCPPALHKLRYRYTLDELPAMLEKLKRKSDLFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCATVIQQLDLNKMRTRTRHHDPKYRLTVHELTLFAAEIDGLACVLPEGSAVKEVLRQTEEFEDRATDLLNKDLDDTDAAYVKDLEEVCDLGGRLCIVLPQLAALTARAAQARWLLDARDSRAAAPSPAQIEKLLQDATTLVPHARLEPERAELQKLRLQIEDWEARVKAVLIEPNSVKPEPSDDAEPQHTTLAELETLLAEGDDIDATLPSHHALHTAISHAKDWLSKVEEMQSKELYPYMHSVEALVRRGSQIPLALYEKDQLAAALHSAHEWKRGAAEMFLKKNWSYSLLEALSPRAGPAEGTGRRRGRGECSAALLEHFSEDASPTEIVAAFKNAEQKELAYVKELRIRNLRKDVCAPPAAGLTFCTCQKRQYGVMSQCEICKDWFHGDCAAARGGGAAARRGWGGVIVMWARLTALRSQIAPHEQRQRRVAVSRLLILISDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_00934519; iTF_00403549;
80% Identity
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