Basic Information

Gene Symbol
Kdm5
Assembly
GCA_905163445.1
Location
NC:12251331-12287563[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.2e-25 1.2e-21 76.5 0.0 3 89 102 184 100 184 0.93
2 2 2.3 3.4e+03 -1.9 0.0 44 68 1278 1305 1265 1321 0.70

Sequence Information

Coding Sequence
atgggaaaatgtgACGAAGCTAATGTGCAAGTTAATATGGGGGACTCGGCGTCCCCTATGAAACCTGATAATTTTTCATTCACCGTGCCCCCCGAGGCTCCTGTCTTCGAACCAACCCCTGAAGAGTTCCTCGATCCCCTGGCTTACATCAGCAAAATACGACCCATTGCTGAGAAGTCAGGGATATGCAAGATCAAGCCCCCCCCGCACTGGCAGCCGCCGTTTGCGGTGGATGTGGATCGACTACGCTTCACGCCGAGGATACAGCGGCTGAACGAGTTAGAGGCTATAACACGGGTAAAAATGAACTTCCTCGACCAGATCATGAAGTTCTGGGAGCTGCAAGGCTCTGTGCTGAAAATACCCACAGTTGAGAGGAAACCCTTGGATCTATATGCTTTACATAAAATTGTCAAAGAAGCTGGTGGCTTCGAAGTATGTTCAGCAGAGCGCAAATGGTCAAAAATAGCGCGACGCATGGGCCACCCTCAGGGCAAAGGGATAGGATCCATCCTTAAGAATCATTATGAACGTATTCTCTACCCCTACGATGTGTTCAAGAGCAGCGGAGCCGCAGGCGGTGCAGGAGACACAAAGGAGACGAAGGTGGAAGTGAAGTGCGAGCAAACGCCGGAGAAGGCGGGGCGCCGCTCCAGCAAGGCGCCGGCGCAGacgccgccgccgcgccgctACAAGAGCTCGGAGCCCGAGGCGGCGGAGGGCAGCCACACCGAGGGCGCGCTGCCCGCCGCCGCGCCCGGCGCCGACAAGAAGAGCCCCGTCAAGGAGGAGCCGGGGGAAGCCAGGAGGAGCCCGCGCGAGAACAAGTGGATGTCGCAGGCGGGCAGCTGCGGCGTGCTGCGCTCCACGCGCCTGCGCGAGCACCGCCTCAGCAACATGACCGTGTCCGTGacgcccgcgccgcccgcgcaCGCGCCGCTGCACCCGGACGACCCGCTCGCCAAGTACATGTGCCACGTGTGCGGGCGCGGCGACATCGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCCTACCACACCTTCTGCCTCGTGCCGCCGCTCGCAGACGTGCCCAAGGGCGACTGGCGCTGCCCCGTGTGCCTCGCCGAGGAGGTGTCCAAACCCACTGAAGCTTTCGGTTTCGAACAAGCCAGCCGCGAATACACTTTGCAGCAGTTTGGGGAAATGGCGGACCAGTTCAAGTCGGATTACTTTAATATGCCGATGGTGCCAACATCAACGGTAGAGCGGGAGTTTTGGCGCGTCGTGTCTTCCATCGATGAAGATGTTACAGTGGAGTACGGCGCCGACTTGCATTCAATGGATCATGGTTCAGGGTTTCCTACAAAGTCCAGCGCACACTTGTATCCTGGCGAACAACAGTATGCAGATTCCAATTGGAATCTGAACAATCTGCCTGTTCTGGAAGGTTCCGTGCTGGGACATATAAATGCTGATATATCTGGCATGAAGATCCCATGGCTGTACGTCGGCATGTGCTTCGCGACGTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTACCTGCACTGGGGCGAGCCGAAGACTTGgTATGGTGTACCGAGCTCCAAGGCAGAGCAATTCGAAGCGGCGATGAAAGTGGAAGCGCCGGAGCTGTTTCAATTACAGCCGGACCTCCTGCACCAATTAGTCACCATCATGAACCCTAACGTGCTTATGAAGGCAGGAGTGCCTGTTTATAGAACGGATCAGCACGCTGGAGAGTTCGTGATAACATTTCCAAGAGCGTACCATGCTGGCTTCAACCAGGGCTACAACTTCGCTGAGGCCGTCAACTTCACACCGGCTGATTGGcTGAAAATGGGTCGCGAATGCATCGCCCACTACTCCACACTTCGGCGATATTGCGTGTTCTCGCACGACGAGCTCGTATGCAAGATGGCTTTAGAAGCTGATTCGCTGAGTCTGACCGTGGCTCTGGCGGCGTACAGGGACATGAGGACCATGCTGCATGATGAGAGGAAACTAAGGAAGTCGTTGCTTGACTGGGGTGTCACGGAAGCCGAACGGGAGGCGTTCGAGCTATTGCCTGACGACGAGCGGCAGTGCCACGAGTGCAAGACCACGTGCTTCTTGTCCTGTGTCACGTGTGCGTGCACCACGCAAGTGGCGTGCCTGCGCCACTACGAGCAGCTGTGCACCTGTGCGCCCGCCGTGCACAAACTGAGGTACCGCTACACACTGGACGAGCTCCCCGCCATGTTGGAGAAGCTGAAGCGCAAATCGGAGTTGTTCCGCGAGTGGGCGGAGGCTGTGCAGAACGCGCTGGACCCGGACACGCCCAAGACCTGCGACCTTGACGGGCTGCGGGCTCACCTAAAGAGGGCGCATGATCTCAAGATGCACAAGACGGAGCTGGTGCGCGCGCTGGAGACGGCCATCGAGGACGCGGAGAAGTGCGCCAGCGTCATCCAGCAGCTGGACCTCAACAAGATGCGCACGCGCACTCGCCACCACGACCCCAAGTACCGGCTCACCATCCACGAACTCACGCTCTTCGCGGCCGAGATCGACGGGCTGGCGTGCGTGCTGCCTGAAGGTTCCGCGGTAAAGGAAGTGCTGCGTCAAACGGCAGAATTTGAAGACCGAGCGACGGACTTACTTGGCAAAGACTTAGAAGATTGTGATGCCGCATCTGTTAGGGAATTGGAAGAGGTGGCGGAGCTGGGCGCGCGGCTGTGCATCGTGCTGCCGCAGCTGGGCGCGGTGCGCGCGCGCCGGGCGCAGGCGCGCTGGCTGGCGGGCGTGCGCGCGCACCGCGACGACTGCAGCACGCTCACGCCCGACGCGCTCGAGCGCCTGCTGGCCGACGGCGCCGCCGTGCTGCCGCACCGCCGCGTCGAGGCCGAGCGCGCCGCGCTGTTCCGCCTCAAGCTACAAGTAGAAGATTGGGAGCGGCGCGTGCGCACTATTCTCATCGATACCACATCAAAGGGACGGGAGTCCATTGACAGTTTAACGGAAGAGCACACGACCCTCATGGAGCTGGACGCTTTGCTGGCAGAAGGGGACGACATCGAAGCAGCGCTGCCCTCGCATCATGCTCTGCATACCGCCACTGCGCACGCGAGGGATTGGCTCGCCAAGGTGGAAGAAATGCAATCAAAAGAACTGTACCCCTATATGCACAGCGTGGAAGCCCTGTCGCGCCGCGGCGCCAGCATACCTCTACCCCTACTGGAGAAACAACAGTTAGCGACTGCACTACAATCAGCAAAGGAATGGCAAAGGGGAGCGGCCGATATGTTTCTTAAAAAGAACTGGCCATACTCCCTCCTGGAAGCCCTATCACCCCGAACTGAGTGCGGGAACGCGACTCGAAGGCGAGGCCGGGCCGAGGTTCCTCCACTGGAAGGCGGCCTGTTGAAGCACTTCAGCGAAGACGCAACTCCCACCGAGATAGTCGCGGCCTTCAAACAGGCTGAGCAGAGGGAGTTGACCGCTATCAAGGAGTTGAGGACGCGTAACATGCGCAAGGAGGTGCGCGCTCCGCCCGCGGCTGGCGTCACGTTCTGCGTGTGTCAAAAGCGGCAATATGGAGTTATGACGCAGTGCGAACTTTGCAAGGATTGGTTTCATGCCTCCTGCGTCGCATCAGCCCGAGAGGAATTGGAGGACAGGTCGGAATCTCCGGAAAGGATAGAACTTCCATTCCCTTGCACGGAGAGCAAGTTCCTGTGCCCCGACTGCACTCGCACCAAACGGCCACGCCTGCACCGTATATTGGCGTTGTTGGTGTGGCTGCAGAAGCTGCCGGTGCGGCTGGCGGAGGGCGAGGCGCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACGCGGCGCGCGCGCTGCTGGCCGGCCTGCCCGCGCAGCGCGCCGCGCCCGAGCGCCGCGACGCGCTGGCGCGGTCATCAGCGAACGTAGAGCACGCTTACAGTGCAACGCCGCGATCGCCGAGTACGCGAGTGGCGCCGGGGCTGCTTCAGAAACTTGAAGACCTCATGCTTGAGGGAGATTTATTGGAGGTGCGGCTGGAGGAGCAAGCGGCGGTGTGGAGCGCCGTGTGGGCCGCGCGCGCCGCCGAGGGCCGGCGCAGCGCGCGCGTGCTGGACGCGGGCCGCCGCAAGCGCGCCACCACCGCCAAGCACCAGCACCAGCTCAAGCGCACGAGGCCGCTTCCACTGCATGGTACGAATACTGCAAAGCCGACCATGAAGAGAGGTTCAGCCACTACGACCAATTACTTAAATAGGAAACAGGGCATGTCATCGGGCTCAGGGTTGATGATGCGGAAACATTACATGGCGCGACAAGAGAGGCGCAAACGCGGAATGCCCAACCGGCATCATCCACGACATTCGAGAATGGCACAAACCCGCGGCTCGCATTCGAACGCGGGCGCCCGCGCGGCCGCCGTGCGCAACGAGAGTGCGCGCCGGAGCAGCTCGTCCTCGCACTCATCCGCTGACGACGACGAGGACTGCGCCGCGGCGTCCTGCTTGCGACCTACGGGAAAAGTCGACTGGGTGCAGTGTGACGGAGGTTGCGATCAGTGGTTCCACATGCACTGTGTCGGACTCAGTCGAGGTGCGCTACGGGAAGACGATGACTACGTGTGCGGCTCCTGTGCAGAACGGTCTGACAGGCATTGA
Protein Sequence
MGKCDEANVQVNMGDSASPMKPDNFSFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPPHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKMNFLDQIMKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSSGAAGGAGDTKETKVEVKCEQTPEKAGRRSSKAPAQTPPPRRYKSSEPEAAEGSHTEGALPAAAPGADKKSPVKEEPGEARRSPRENKWMSQAGSCGVLRSTRLREHRLSNMTVSVTPAPPAHAPLHPDDPLAKYMCHVCGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSNWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKVEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKSLLDWGVTEAEREAFELLPDDERQCHECKTTCFLSCVTCACTTQVACLRHYEQLCTCAPAVHKLRYRYTLDELPAMLEKLKRKSELFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTAEFEDRATDLLGKDLEDCDAASVRELEEVAELGARLCIVLPQLGAVRARRAQARWLAGVRAHRDDCSTLTPDALERLLADGAAVLPHRRVEAERAALFRLKLQVEDWERRVRTILIDTTSKGRESIDSLTEEHTTLMELDALLAEGDDIEAALPSHHALHTATAHARDWLAKVEEMQSKELYPYMHSVEALSRRGASIPLPLLEKQQLATALQSAKEWQRGAADMFLKKNWPYSLLEALSPRTECGNATRRRGRAEVPPLEGGLLKHFSEDATPTEIVAAFKQAEQRELTAIKELRTRNMRKEVRAPPAAGVTFCVCQKRQYGVMTQCELCKDWFHASCVASAREELEDRSESPERIELPFPCTESKFLCPDCTRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLAGLPAQRAAPERRDALARSSANVEHAYSATPRSPSTRVAPGLLQKLEDLMLEGDLLEVRLEEQAAVWSAVWAARAAEGRRSARVLDAGRRKRATTAKHQHQLKRTRPLPLHGTNTAKPTMKRGSATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGMPNRHHPRHSRMAQTRGSHSNAGARAAAVRNESARRSSSSSHSSADDDEDCAAASCLRPTGKVDWVQCDGGCDQWFHMHCVGLSRGALREDDDYVCGSCAERSDRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
-
80% Identity
-