Basic Information

Gene Symbol
Kdm5
Assembly
GCA_037179545.1
Location
CM073950.1:19465867-19508720[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-24 6.3e-21 76.2 0.0 2 89 52 135 51 135 0.93

Sequence Information

Coding Sequence
atgtttataaataaaaataaatatagacgGACAAATCACGCAGATTTAGCTAGctctaaaCATTGGCAGCCCCCTTTCGCAGTGGACGTAGACCGGTTGCGCTTCACGCCGAGAATACAAAGACTCAATGAATTGGAGGCGATAACCCGAGTGAAGTTAAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAAGGCTCCGTGCTCAAGATCCCCACGGTGGAACGGAAGCCGCTGGACCTCTATGCTCTACACAAGATTGTTAAAGAAGCAGGTGGCTTCGAAGTATGTTCCTCTGAGCGAAAATGGTCGAAGGTAGCTCGTCGCATGGGCTTCCCGCAAGGCAAGGGCATCGGCTCCATCCTCAAGAACCACTACGAGAAGATCTTGTACCGGTACGACATCTTCAAAAACAATGGAACCGAAAATAAGGAGACGACGGATATCAAAGTAAAAGGCGAACAAACGCCAGAAAAAGCGAGCGGCACACGTAGCCGTTCTACAAGCAAATGTACGGCGGCCGCGACTCCGCCGCCGGCGCGCCGGTTCAAGCCGGACCCGGACGGGCCCACGCCGGCCGACACCGTGCCGGCAGACCGGACACTCAGTCAAGTGCAGGAGGAGGCTATGAAGACGCCCGTTAAGGAGGAGAGTCCAGAGACTAGGAGGAGTCCTCGTGAGAATAAGTGGATGTCAGCGGCCGGATCGTGCGGGGCACGGTCCCGCGTGACTCGCGCCACTCGTCTGCGGGAGCACCGCATGTCCAACATGACGGTgtccgtgacgccggcgccgcccTCCAGCCTGGCGCTGCATCCGGACGACCCGCTGGCGAAGTATATGTGCCACGTATGCGGGCGCGGAGATGTGGAGGAGCAGATGTTGCTCTGTGACGGGTGCGACGACTCGTACCACACGTTCTGCTTGCTGCCGCCGCTGGCCGACGTGCCCAAGGGGGACTGGCGCTGTCCCGTCTGTGCGGCGCAAGAGGTATCAAAACCCACAGAAGCGTTCGGGTTCGAACAAGCGACACGTGAATACACACTACAACAGTTTGGAGAGATGGCCGACCAGTTCAAATCAGATTATTTCAATATGCCTGTACATATGGTGCCAACATCGACAGTAGAGAAAGAGTTCTGGCGCGTCGTGTCGTCAATAGACGAAGATGTTACTGTAGAATATGGCGCTGACCTGCACTCAATGGACCATGGTTCTGGTTTCCCCACAAAGACACACGCCCACCTGTACCCAGGCGAGCAGCAGTACGCGGACTCGTCGTGGAACCTCAACAACCTGCCCGTGCTCGAGGGCTCCGTGCTCGGACACATTAACGCGGACATTTCGGGGATGAAGATCCCGTGGCTGTATGTGGGCATGTGCTTCGCGACATTCTGCTGGCACAATGAAGACCACTGGAGTTATTCTATCAACTACCTTCATTGGGGAGAACCCAAGACTTGGTATGGAGTACCAAGTTCAAAAGCAGAACAGTTCGAAGCTGCTATGAAAGCGGAGGCTCCTGAACTGTTCCAGTTACAACCAGACCTGCTGCATCAGCTGGTCACCATCATGAATCCCAATGTTCTCATGAAGGCGGGAGTACCTGTGTATAGGATGGACCAACACGCTGGAGAGTTTGTGATCACGTTTCCTCGCGCTTACCACGCCGGCTTCAACCAAGGATACAACTTTGCCGAGGCGGTTAATTTCACACCTGCTGACTGGCTAAAAATGGGCCGTGAATGCATAGCTCACTACTCGACTCTGCGGCGGAACTGTGTGTTCTCTCACGACGAGTTGGTTTGCAAGATGGCGCTCGAAGCTGATGGGTTAAGCCTTACCGTGGCGCTAGCGGCCTACAGGGACATGAGGACCATGCTGCATGATGAGAGGAAGCTCAGAAAGGGTCTGTTGGACTGGGGCGTCACCGAAGCAGAACGCGAAGCCTTCGAGCTCCTACCTGATGATGAGCGACAATGTACCCTGTGCAAGACGACGTGCTTCTTGTCGTGCGTGACGTGTGTGTGCACGCCGCACGTGGCGTGTCTGAAGCACTACACGCAGCTGTGCGACTGTCCCGCACACAAACACAAGCTCAGGTATCGCTACACCTTAGACGAGCTACCAGCCATGCTAGAGAAGTTAAAGAAGAAATCGGAGCAGTTCCGAGAATGGGCAGAAGCTGTACAGAACGCACTCGACCCAGACACGCCCAAGACTTGCGACCTGGACGGGCTCCGGGCGCATCTGAAGAGGGCTCATGATCTCAAGATGCACAAAACCGAGCTCGTCCGAGCTTTAGAAACGGCAATAGAAGACGCAGAGAAATGTGCGTCAGTGATACAACAACTGGACCTCAACAAGATGCGCACCCGCACTCGGCACCACGACCCCAAGTACCGCCTCACAATACATGAACTCACGCTATTCGCCGCTGAGATTGACGGACTCGCTTGTGTCTTACCTGAAGGCTCAGCAGTGAAAGAAGTATTACGACAAACATCGGAGTTCGAGAGCCGCGCGACCGACCTACTCAACAAAGATCTGGAAAAGACTGATCAAGCATATGTCAGAGAACTGGAAGAGacATCAGAGCTCGGCTCCCGCCTGTGCATCGTCTTGCCACAGTTAGGTCCGCTACAAGCTCGCCTGCAACAAGTGAAGTTCATAGAGGAAGTGCGCGCCTACCGCGAGGACTACTCTACGCTGACGCGGGACGTCATCGACAGGCTGCTCAACGACGCCGACCACGTCGTGCCGCATCACAAGGTCGAGACGGAGCGCTCACTACTCTTCAAACTGAAAGCTCAAGTAGATGAATGGGAATCCCGCGCCCGCGCAGTCCTGATCGACACTTCCAAAAACCCTCCGCCGGAACTCGAACCCCAGCACACCACGCTGTCCGAGCTGGACATATTGTTGGCAGATGGGGAAGAGATTGAGGCGGCCTTGCCGTCCTACCACGCGTTACAGACTGCCGTGTCTCATGCTAGGGATTGGCTAAATAAGGTAGAAGAGATGCAGTCAAAGGAGCTGTACCCATACATGCACAGCGTGGAGAACATCGTGAAGCGCGGCGCACACATCCCGCTGTCGCTGTACGAGAAGGACCAACTCAAGCAGGCGCTGCAGTCGGCACGGGACTGGCAGCGGGGAGCCGCCGACATGTTCCTCAAGAAGAACTGGCCCTACTCACTACTAGAAGCCCTGTCTCCACGAGTGGAAGCGGGAGAACCTGTGAGTCGGCGGCGAGCGCGCCCCGGCGGTGAGGGCGCCTCCTCGCTGGAAGCAGGTCTGTTCCTCAGGAACTTCAGCGAGGATTCTACCCCGACTGATATTGTAGCCGCCTTCAAACAAGCCGAACAAAAGGAGCTACATGCTATCAAGGAGTTGAGAGCCCGTAACTTGAGGAAAGAAGTCCGCGCGCCCGTGTCAGCCGGCGTGACGTTCTGCACGTGTCAGAAACGACAGTATGGCGTCATGACGCAGTGCGAGCTGTGCAAGGATTGGTTTCATGcaAACTGCATAGCAGCATCTAAAGAAGATCGCGAAGAATCACCGGAGCGCGTCGAAGTTCCGTTCCCTAACACTGAACCCAAGTTCCTATGTCCCGACTGTATGAGAACCAAGAGGCCACGGTTGGATCGCATACTGGCTTTATTGGTATGGCTCCAAAAGCTTCCCGTCCGCCTAGCGGAGGGCGAAGCCCTGCAGTGCGTGACAGAGCGAGCCATGGCGTGGCAGGACGCGGCGCGGGCGCTGCTGGCCAGCCCCGTGCTGGGCGCACTGCCGCTGCACGAGCACGACACGCTGCAGGCCAGCCGGGAGAAGGCGGACAAACTTAATGCCGAGCTGAAGAAGGCTACCGGCAGGGCGCATGATTCACATTCTGCGCAGAATGCGAGGTCATCAGCGAGCGTAGAACATGCGTACAGCGCTACGCCGCGATCACCGAACACGCGGGTCGCGCCCGGCTTGTTAAACAAATTAGAAGACTTGATGTTGGAAGGAGATTTGTTAGAAGTGCGGCTGGAGGAGCAGGCGCAGGTGTGGAGCGCCGTCGTGGCGTGTCGAGCCGCCGAGGGACGTCGGGCCGCCAGGCACGACGCCGGACGTCGCAAGAGGCACGCGAGGCAGCCGCGACACCACCACCAGCTCAAGCGGACCAGGACAAGGCACCACCATGttgcacCAGTCGTGAAACCTACGCTGAAACGAGGCACAGCAACCAccacaaattatttaaataggaAACAGGGAATGTCATCTGGGTCAGGCTTGATGATGCGCAAACATTACATGGCGAGGCAGGAGCGACGCAAGCGTGGGCTCGCGCCCGCCTCGCGTGGGAAACACCCCCGGCAGACCAGGATGGGTCAGCGTGCTGCCGCCAGCAGTTCTGGCGCCGCCGCGGGCAGTACACGTCGCAGCAGCTCGTCGTCGGCGTCGTCTGCGGAGGATGACGAGGACTGCGCCGCTAAAAACTGTCTCAGGCCCACGGGCAAAGTAGACTGGGTCCAATGCGACGGCGGCTGTGACCAGTGGTTCCACATGCACTGTGTGGGGCTCGCGCGCGGCGCCTTGCGGGAGGACGACGACTACGTCTGCGGGACGTGTGCCCAGCGGCCACACTAA
Protein Sequence
MFINKNKYRRTNHADLASSKHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSSERKWSKVARRMGFPQGKGIGSILKNHYEKILYRYDIFKNNGTENKETTDIKVKGEQTPEKASGTRSRSTSKCTAAATPPPARRFKPDPDGPTPADTVPADRTLSQVQEEAMKTPVKEESPETRRSPRENKWMSAAGSCGARSRVTRATRLREHRMSNMTVSVTPAPPSSLALHPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCAAQEVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKTHAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECIAHYSTLRRNCVFSHDELVCKMALEADGLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCTLCKTTCFLSCVTCVCTPHVACLKHYTQLCDCPAHKHKLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLACVLPEGSAVKEVLRQTSEFESRATDLLNKDLEKTDQAYVRELEETSELGSRLCIVLPQLGPLQARLQQVKFIEEVRAYREDYSTLTRDVIDRLLNDADHVVPHHKVETERSLLFKLKAQVDEWESRARAVLIDTSKNPPPELEPQHTTLSELDILLADGEEIEAALPSYHALQTAVSHARDWLNKVEEMQSKELYPYMHSVENIVKRGAHIPLSLYEKDQLKQALQSARDWQRGAADMFLKKNWPYSLLEALSPRVEAGEPVSRRRARPGGEGASSLEAGLFLRNFSEDSTPTDIVAAFKQAEQKELHAIKELRARNLRKEVRAPVSAGVTFCTCQKRQYGVMTQCELCKDWFHANCIAASKEDREESPERVEVPFPNTEPKFLCPDCMRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLASPVLGALPLHEHDTLQASREKADKLNAELKKATGRAHDSHSAQNARSSASVEHAYSATPRSPNTRVAPGLLNKLEDLMLEGDLLEVRLEEQAQVWSAVVACRAAEGRRAARHDAGRRKRHARQPRHHHQLKRTRTRHHHVAPVVKPTLKRGTATTTNYLNRKQGMSSGSGLMMRKHYMARQERRKRGLAPASRGKHPRQTRMGQRAAASSSGAAAGSTRRSSSSSASSAEDDEDCAAKNCLRPTGKVDWVQCDGGCDQWFHMHCVGLARGALREDDDYVCGTCAQRPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
iTF_01028995;
80% Identity
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