Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_004959915.1
Location
RPCZ01000139.1:479249-507725[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.8e-25 2.3e-21 76.2 0.0 2 89 101 184 100 184 0.94
2 2 7 2.1e+04 -4.3 0.0 46 62 1217 1234 1206 1242 0.74

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACATTCACCGTACCCCCTGAGGCCCCTGTCTTCGAGCCAACTCCTGAAGAGTTCCTCGATCCTCTGGCGTATATCAGCAAAATCAGGCCCATTGCTGAGAAGTCAGGGATATGCAAAATAAAACCCCCCGCGcacTGGCAACCTCCATTTGCCGTTGATGTAGACCGACTGAGATTTACTCCTCGGATTCAACGGTTAAATGAGTTAgagGCAATCACAAGAGTGAAGTTAAATTTCCTGGATCAGATAATCAAGTTCTGGGAGCTTCAAGGCTCTATATTGAAGATACCAACGGTGGAAAGGAAACCATTAGATTTGTATGCACTACATAAAATTGTGAAAGAAGCTGgTGGTTTCGAAGTATGTTCAGCGGAGAGGAAATGGTCGAAGATCGCACGACGCATGGGTCATCCACAGGGTAAAGGTATAGGTTCGATTCTCAAGAATCACTACGAGAGGATCCTCTACCCGTACGATGTTTTCAAGAGCAGTGGCGCTGTTGGCAACGGAAATGATAGCAAAGAAACCAAGATAGAAGTAAAAGGCGAACAAACACCAGAGAAGGGTCGCAGGTCAAGCAAGCCCCCGGCGGCGACTCCGCCCCCCGCCCGGCGGTTCAAGAGCTCGGAGCCCGAGCCGGCAGAGGGCAGCCACACGGAGGGGGCTCTGCCATTGGGAGACGTGAAGAAAACTCCCATCAAGGAAGAACCGGGAGAAACAAGGAGGAGTCCGCGTGAGAACAAATGGATGTCCCAGGCGGGTAGCTGTGGAGCCCGAGCCCGCGCCGTCCGCTCCAAGCGACTGAGGGAACACCGCTTCAGTAATATGACGGTGTCCGTTACGCCCGCGCCTCCCCCGTTACATCCCGACGACCCGCTCGCGAAGTACATGTGTCATATATGCGGGCGTGGAGACATCGAGGAACAGATGCTGTTGTGTGATGGCTGTGATGATTCCTACCACACGTTCTGTTTGGTTCCGCCACTAGCTGACGTGCCCAAGGGAGATTGGAGGTGTCCCGTGTGTTTGGCCGAGGAGgtatCAAAACCGACTGAGGCTTTCGGCTTTGAGCAAGCTAGCCGTGAATATACATTACAGCAGTTCGGAGAAATGGCTGATCAATTCAAATCGGATTACTTCAATATGCCGGTACATATGGTGCCCACGTCGACGGTGGAGCGAGAATTCTGGCGAGTCGTGTCATCTATAGATGAAGACGTAACTGTTGAATATGGAGCGGATTTGCATTCAATGGACCATGGTTCAGGTTTTCCAACAAAATCCAGTGCCCATCTGTATCCCGGGGAACAGCAATATGCTGAATCCTCATGGAATCTCAACAACTTGCCCGTGTTAGAGGGATCTGTACTGGGGCATATAAATGCAGACATATCCGGGATGaagGTACCTTGGCTATATGTTGGCATGTGTTTTGCCACATTCTGCTGGCACAATGAAGACCATTGGAGTTATTCCATCAATTACTTACACTGGGGAGAACCAAAGACATGGTACGGTGTACCAAGTTCCAAAGCGGAACAATTCGAAGCTGCTATGAAGGCCGAGGCGCCCGAGCTGTTCCAGCTACAACCAGACCTGCTGCATCAGCTGGTCACCATCATGAACCCTAACGTGCTCATGAAAGCCGGAGTACCTGTCTACaggaCTGATCAACATGCTGGAGAGTTTGTAATAACCTTTCCCCGCGCCTACCACGCTGGTTTCAATCAAGGATATAACTTTGCTGAGGCAGTCAACTTCACACCAGCTGATTGGCTAAAAATGGGTCGCGAGTGCATCACCCACTACTCCACTCTGCGGCGGTATTGCGTGTTCTCCCACGACGAGCTCGTCTGTAAGATGGCGCTAGAGGCGGACTCACTCAGTTTAACCGTGGCCCTGGCCGCGTACAGAGACATGAGGACGATGTTACATGACGAGAGGAAGTTAAGGAAGGGACTACTTGACTGGGGTGTAACGGAGGCTGAGCGTGAGGCATTCGAACTCCTCCCAGATGATGAGCGTCAATGTCACGAGTGTAAGACGACGTGTTTCCTGTCGTGCGTTACATGCGCCTGTACTACACAAATCGCATGTCTGCGGCACTACGATCAACTGTGCAGTTGTTCGCCGGCGGAACACAAACTAAGATATCGCTACACACTAGACGAGCTCCCGGCTATGCTTGAGAAGTTAAAGCGTAAATCGGAACAGTTCCGCGAGTGGGCGGAGGCCGTGCAGAATGCTTTAGATCCGGACACGCCCAAAACATGTGACCTTGACGGACTGAGGGGGCATCTGAAGAGGGCTCACGATCTGAAGATGCACAAGACGGAACTGGTGCGTGCATTGGAAACGGCGATAGAGGACGCTGAGAAATGCGCGTCTGTGATACAACAGTTGGATCTGAACAAGATGAGGACGAGGACCAGGCATCACGACCCCAAAAGTCTATATGTGTTTATCATTCCAGGGTCCGCTGTTAAAGAAGTGCTTCGTCAGACAGCTGAGTTTGAGGACAGAGCCATCACACTGCTGGGGAGAGACTTGGACGACTGTGACGCTTCATCTGTGAGGGAATTAGAAGAGGTCGTTGACCTCGGCTCTCGTCTCTGTATAGTCCTGCCACAGCTATCAGCGCTTCAGGCTCGTCTTCAACAAGAGAAGTTCATATTGTCTGTTCGTACACACCGCGAGGACTCCGCCTCACTCACACCAGAAATCATTGACAAACTGCTGGCTGAAGCAGAAACGGTATTACCGCATAGGAAAGTTGAAACGGAACGGGCTGgtctttataaattgaaatTACAAGTTGAAGATTGGGAACAGAAAGCCCGAGCTATATTAGACACGAACAGGGAACGTGATGATGATTCACACACTACGCTGGCTGATTTAGAAGAGTTGTTAGCAGCTGCTGATGAAGTGGAAGCAGCGCTGCCCTCTAGACATGCGTTGGCTACAGCCGCTGCACACGCCAAAGACTGGCTTGCCAAGGTGGAGGAAATGCAATCAAAGGAATTATATCCATACATGCACAGTGTTGAAGCTCTGTGCAAGCGTGGAGCACAGATACCTGTGGCTCTGCTCGAGAAGAGACACTTGGCAGCAGCGCTACTGTCAGCCAGGGACTGGCAGAGAGGAGCCGCTGATATGTTCCTTAAGAAGAACTGGCCTTACTCTTTATTGGAGGCGTTATCACCTCGTTCGGAGTGCGCGCCTCGTCGTAAGAAAGGGGACTCTGAAGGATTAGCTAAAAATATGCGGAAAGAGGTTCGAACGCCCGCTCCCGGCGTTACTTTTTGTGTGTGTCAGAAGAGACAGTATGGAGTGATGACGCAGTGTGAGCTCTGCAAAGACTGGTTCCATGCGGCCTGTGTATTGTCGAGTCGCTCGGAGGAGTCTGAGTCATCACCGGAGCCCGAGGCAGAGCCTTCGCCCTCCCCGGCGCCTGAACCGAAGTTCCTCTGTCCTGACTGCGCACGAACAAAACGACCTAGATTACATCGGATATTGGCTTTATtgGTTTGGCTACAAAAGCTGCCTGTACGTTTAGCTGAAGGTGAAGCGCTACAGTGTGTGACCGAGCGGGCCATGGCCTGGCAGGACGCAGCTAGGGCGTTACTGGCCTCACTACCGACTACACGCGTGGAGAGGGGGGAGAGGGGAGAACGGCAGGGGAGGGGAGACGCACACAGcAGGTCGTCAGCTAGTGTGGAGCACGCGTATAGTGCGACACCTAGAACCAGTACGGCTCGAGTCTCACCCGCCATGCTGCAGAGACTTGAAGATCTCATGATGGAAGGTGACCTATTAGAGGTTCGTCTCGAGGAACAGCGTCTAGTATGGGCTGCTGTGTGGTCGGCTCGAGCGGCGGAAGGTCGGCGGGCGGCGCGAGTGTTGGACGCGGGACGGAGGAAGAGGGCTCAAAGACCTGCACGACATCATCACCCGCTTAAGAGGACGAGAGTACTACACgGAACAAACACCACAAAGACCACTATGAAACGCGGCTCAGCCACAACTACCAACTACTTAAATCGGAAACAgGGCATGTCGTCCGGCTCCGGGCTAATGATGCGTAAGCACTACCTAGCCCGCCAGGAGCGTCGTAAGCGCCCCCTGCCCGCGCGCCCTCCTCCTAGACCGCGCGCCCCCCGCTCGCCCCGCACCCCTCGCGCGCCCCGCTCCCCTCGATCGTCCTCTTCTTCACGCTCATCAGCTGATGATGAGGAGGACTGCGCAGCCGCTGACTGTCTTCGACCTACAGGCAAGGAGGTTGACTGGGTTCAATGCGACGGCGGTTGCGACCAATGGTTCCACATGCACTGTGTAGGACTTAGTCGAGGAGCTTTGAGGGAAGATGATGACTACGTGTGTGGCTCGTGTGCTGAGAATAGGAAGTAA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSILKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKNHYERILYPYDVFKSSGAVGNGNDSKETKIEVKGEQTPEKGRRSSKPPAATPPPARRFKSSEPEPAEGSHTEGALPLGDVKKTPIKEEPGETRRSPRENKWMSQAGSCGARARAVRSKRLREHRFSNMTVSVTPAPPPLHPDDPLAKYMCHICGRGDIEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKVPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECITHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKGLLDWGVTEAEREAFELLPDDERQCHECKTTCFLSCVTCACTTQIACLRHYDQLCSCSPAEHKLRYRYTLDELPAMLEKLKRKSEQFREWAEAVQNALDPDTPKTCDLDGLRGHLKRAHDLKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKSLYVFIIPGSAVKEVLRQTAEFEDRAITLLGRDLDDCDASSVRELEEVVDLGSRLCIVLPQLSALQARLQQEKFILSVRTHREDSASLTPEIIDKLLAEAETVLPHRKVETERAGLYKLKLQVEDWEQKARAILDTNRERDDDSHTTLADLEELLAAADEVEAALPSRHALATAAAHAKDWLAKVEEMQSKELYPYMHSVEALCKRGAQIPVALLEKRHLAAALLSARDWQRGAADMFLKKNWPYSLLEALSPRSECAPRRKKGDSEGLAKNMRKEVRTPAPGVTFCVCQKRQYGVMTQCELCKDWFHAACVLSSRSEESESSPEPEAEPSPSPAPEPKFLCPDCARTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDAARALLASLPTTRVERGERGERQGRGDAHSRSSASVEHAYSATPRTSTARVSPAMLQRLEDLMMEGDLLEVRLEEQRLVWAAVWSARAAEGRRAARVLDAGRRKRAQRPARHHHPLKRTRVLHGTNTTKTTMKRGSATTTNYLNRKQGMSSGSGLMMRKHYLARQERRKRPLPARPPPRPRAPRSPRTPRAPRSPRSSSSSRSSADDEEDCAAADCLRPTGKEVDWVQCDGGCDQWFHMHCVGLSRGALREDDDYVCGSCAENRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00353860;
90% Identity
-
80% Identity
-