Cpus014006.1
Basic Information
- Insect
- Cabera pusaria
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_954871355.1
- Location
- OX940892.1:26241995-26259638[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.27 1.3e+04 -3.5 0.3 58 75 55 72 29 99 0.49 2 3 1.5e-77 7.4e-73 246.9 23.8 1 296 124 406 124 409 0.90 3 3 0.083 4.1e+03 -1.8 10.5 195 271 392 466 384 484 0.69
Sequence Information
- Coding Sequence
- ATGGGGCATCGATCAGAACTGGCCACGCCTGATAATAGCGACGAGGAGAGCGGGGGTGCCTTCACCGATGGAGACTTCGGAGAGTCCGACGAAGAAACCGTTCTCGAAAGAAACGATAAAAAATCTTCCAACATGCCTGTTAACGAGACGGTCAATGAACAAGTTCAGAAAACTATAACCAACGGGAACTGTTCTCAAAAAGGACACGAGGAATCGTCTCCAGAAGTTCAGATCAAAGTGAACGGACATAAAAATAGTGACATTATAAGTGATGTGGACAATTACAATGAAGCATCCGAAGTGAGAAGAGACTCCCACGGGGACCAGAATCCTTCTATTGTTGGGATTCTTGGAGATCAGCATAATCATGCGGAGCAGCGTCTGGCGGCGCGACGCGCGGCTCGGGCTGAGGCTCGTGAGATACGTATGAGGGAGTTGGAGCGCCAGCAGAGGGAACAGGAGGACCATGCTGACAAGGCGTATGACATGTATGCAGAGACGGTGGGACGTCGCGGCGGCACGCGGCTGGCGGCGCTCAGTCCGGCCACCAGCCTCGTACACTCTCCAAGGAGGAGCTCTGAAGACTCCGCTGATGACTCCTTCAATATTAAGGACTTGAGGCACGAACTGAAAGAAGTAGAAGAGAAGTTCCGCAAGGCGATGATACTGAACGCTCAGCTGGACAACGACAAGGCCGCGCTCCACTACCAGCTGGAACTGCTCAAGGATCGCATCCTGGAACTGCAGGAAGAACATGCACAGCTACAGCGAGAGCATAGAGAGAAATGCTCAACACACGAGCGTCTAAAACGCGAGCACGTGTCCCTAGAGCGAGAGTTGACCGGCGCTCGGGACTCGGTCCGAGCTCGGGACtcggccgccgccgccgcgggCTTCGTGTTTGTGGAAGCAGCGCCCGGGGCTGACTGCGCGGAGGGGTTCGGACAGGTGCCGCCGCTGGCGTTGCTGTCCCAGGAGCATGAGAGAGCGCTCGCGGAGGAGGGAGAAGGCACGCTGGACGTCCGGTTGCAGAAGCTGGTGAGCTCTAAGCTAGCGCTGGAGTCAGAGGTTCGCAAACTGAAGCTGACCTTGAACGAGGAACGCGCCGCCAGACAGAACGGTGTAGCCAGCCGGCACGACCAGCATTATGAGACCGAACTGGAGAGTCTCCGCAAGTCAGTGTCGGAGGCGAAGGGGCGCGCGGCGCGCGCGGAGGCCGAGGCGGCGCTGCAGGCGGCCGGCGTGGCGCGCCTCGAGGCGCAGCTGCAGCGGCTGCGCGCCCGCCAGGACCTGCACGACGACCAGGAGGAGCAGCTCAAACTGGAGCGCCGCAAGCTGCAGAGAGAGGCGAGAGACGCTCTCAACCGAGTGGAAGAGTTAGAGACAGAAAACAGCCACCTAACGAAACGACTCGACAAACTGAAGAACGCCAAGTCAGCGCTTCTCAAGGACCTGTGA
- Protein Sequence
- MGHRSELATPDNSDEESGGAFTDGDFGESDEETVLERNDKKSSNMPVNETVNEQVQKTITNGNCSQKGHEESSPEVQIKVNGHKNSDIISDVDNYNEASEVRRDSHGDQNPSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPATSLVHSPRRSSEDSADDSFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALHYQLELLKDRILELQEEHAQLQREHREKCSTHERLKREHVSLERELTGARDSVRARDSAAAAAGFVFVEAAPGADCAEGFGQVPPLALLSQEHERALAEEGEGTLDVRLQKLVSSKLALESEVRKLKLTLNEERAARQNGVASRHDQHYETELESLRKSVSEAKGRAARAEAEAALQAAGVARLEAQLQRLRARQDLHDDQEEQLKLERRKLQREARDALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00926625; iTF_00032929; iTF_00207010; iTF_00206088; iTF_00143083; iTF_00033822; iTF_00650026; iTF_00895959; iTF_00666553; iTF_00913625; iTF_00635423; iTF_00790282; iTF_00125138; iTF_00390387; iTF_00818359;
- 90% Identity
- -
- 80% Identity
- -