Ahis001507.1
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_947579745.1
- Location
- OX388148.1:15811476-15826132[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.21 4.4e+03 -3.1 0.5 68 279 81 103 39 107 0.53 2 3 6e-76 1.2e-71 241.6 23.9 1 297 123 406 123 409 0.90 3 3 0.25 5.2e+03 -3.4 9.3 128 170 429 471 415 483 0.46
Sequence Information
- Coding Sequence
- ATGGGGCATCGATCAGAAGTGGCCACGCCTGATAACAGCGACGATGAAAGCGGGGACGCCTTCACCGACGGAGACTTCGGAGACTCCGACGACGAGACCGTTCTAGAACACAATGAAAGCCAGTCTTCGAACATCCCGGTCAACGAGACTGTCAATGAAGCAATAGACAAAACTCTCACAAACGGCAACTGCTCTCATGCTGGAGAAGAGGCCTCTTCTGAGGATCAACCTAAAGTGAACGGACGTAAAAACAGTGAAACTCAAAGTGATGTGGAAAATTATAGTGCAACGTCAGATGTGAGAAGGGATTCACACGGCGACCAGAATCCTTCGATCGTGGGGATACTAGGAGACCAGCACAACCATGCAGAGCAGCGGCTGGCGGCGCGGCGCGCGGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGCGAGCTGGAGCGGCAGCAGCGGGAGCAGGAGGACCATGCCGACAAGGCGTATGACATGTATGCAGAAACGGTGGGTCGGCGCGGCGGCACGCGGCTCGCGGCGCTCAGTCCCGCAGCCAGCCTGGTGCACTCGCCCCGGCGGAGTTCTGAAGACTCCGCAGACGACACCTTTAACATTAAGGATTTAAGGCACGAATTGAAAGAAGTCGAGGAGAAGTTCCGCAAGGCGATGATCCTAAACGCGCAGCTGGACAACGACAAGGCGGCGCTGCACTACCAGCTCGAGCTGCTGAAGGACCGCATCCTCGAGCTGCAGGAGGAGTACGCGCAGTTACAGCGCGAGCACCGCGAGAAGTGCTCGGCGCACGAGCGGCTGCGGCGCGAGCACGTGGCGACGGAGCGCGAGCTGGCGTGCGCGCGGGACGCGGTGCGCGCGCGGGACGCGGCCGCCGCGCACGCGGGCTTCGCCTTCGCGGAGGCCGCGCCCGGCGCCACGCACGCCGAGGGGTTCGGCGCCGTGCCGCCCCTGGCGCTCCTCTCGCACGACCAAGAGAAGGCGCTCGCGGACCAGGGCGAGGGCACGCTCGACGTGCGGTTGCAGAAGCTGGTGAGCGCGAAAACCGCCCTAGAGTCAGAAGTTCGAAAACTGAAGTTGACGCTGAACGAGGAGCGCGCGGCGCGGCAGAACGGCGTCTCCAGCCAACACGACGCCGACTACGAAAACGAATTGGAGAGTCTCCGCAAGTCGGTATCGGAGGCGAAGGGCCGCGCGGCGCGGGCGGAGGCCGAGGCGGCGCTGCAGGCGGCCGGCGTGGCGCGGCTCGAGGCGCAGCTGCAGCGGCTGCGCGCGCGCCAGGACGCCACCGACGAGCGCGAGGAGCAACTCAAGCAGGAGCGCCGCAAGCTGCAGCGCGAGGCGCGGGAGGCCCTCAACCGCGTGGAAGAGCTGGAGACCGAGAACAGCCACCTGACGAAGCGGCTCGACAAACTGAAGAACGCCAAATCAGCGCTACTGAAGGACCTGTGA
- Protein Sequence
- MGHRSEVATPDNSDDESGDAFTDGDFGDSDDETVLEHNESQSSNIPVNETVNEAIDKTLTNGNCSHAGEEASSEDQPKVNGRKNSETQSDVENYSATSDVRRDSHGDQNPSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPAASLVHSPRRSSEDSADDTFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALHYQLELLKDRILELQEEYAQLQREHREKCSAHERLRREHVATERELACARDAVRARDAAAAHAGFAFAEAAPGATHAEGFGAVPPLALLSHDQEKALADQGEGTLDVRLQKLVSAKTALESEVRKLKLTLNEERAARQNGVSSQHDADYENELESLRKSVSEAKGRAARAEAEAALQAAGVARLEAQLQRLRARQDATDEREEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00250477;
- 90% Identity
- iTF_00926625;
- 80% Identity
- -