Celi009211.1
Basic Information
- Insect
- Crocallis elinguaria
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_907269065.1
- Location
- OU026068.1:1672150-1687553[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-75 1.7e-70 238.3 16.4 1 268 125 392 125 414 0.89 2 2 1 2.8e+04 -6.5 13.0 1 153 412 461 412 486 0.47
Sequence Information
- Coding Sequence
- ATGGGACATCGATCAGAAGTGGCTACGCCTGATAACAGTGATGAGGAGAGTGGGGACGCCTTCACCGACGGAGACTTTGGAGACTCCGACGACGATAGTGTCCTTGAAATAAATGATGCGAAATCTTCAAATATCCCCGTCAACGAGACGGTCAATAAAGAAATAGAGGAAAGCAGTATTAACAACGGCAACTATTCTCATAATGGACATGAGACATCCCCAGCGGAAGATCAAACCACAGTTAATGGACGAAAGAACAGTGATAATCACAGTGATGTGGAAAATTTTAGTGCTACATCGGAAGTAAGGCGGGATTCACATGGAGATCAGAATCCTTCCATTGTAGGAATCCTCGGAGATCAGCATAATCATGCGGAACAGCGGCTTGCCGCGAGGCGCGCGGCGCGGGCGGAGGCGCGAGAGATCCGCATGCGCGAGCTGGAGCGGCAGCAACGGGAACAAGAGGACCATGCTGATAAGGCGTATGACATGTATGCGGAGACGGTGGGACGGCGCAGCGGACCACGGCTCGCCGCCGTCAGCCCCGCGGCCAGCCTCGTGCTCTCGCCCCGGCGGAGTTCGGAAGACTCGGCGGATGACACCTTTAACGTTAAGGACCTAAGGCACGAACTGAAAGAAGTGGAGGAGAAGTTCCGCAAAGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTGCACTACCAGCTCGAACTGCTCAAGGACCGCATCCTCGAGCTGCAAGAGGAACACGCGCAGTTGCAGCGCGAGCACCGAGAGAAGTGTTCAGCGCACGAGCGTCTAAAACGCGAGCACGTGTCGCTGGAGCGGGAGCTAACGGGCGCGCGGGACGCGGTGCGCGCGCGGGACGCGGCCGCGGCGGCCGCGGGGTTCGCCTTCGCGGAGGCCGCGGGGGGAGTGGGGGACGAGCCCGCGGGGGGCGGCCAAGGCTTCGGCGCCGTGCCGCCGCTGGCGCTACTGTCGCACGCCAGCGACCAGGCGCTCGCCGACCAGGGAGAAGGCACGCTCGACGTGCGGTTGCAGCGGCTGGTGGGCGCGAAGCAGGCGCTGGAGTCCGAGGTGCGCAAGTTGAAGTTAGCGCTCAACGACGAGCGCGCCGCGCGGCACAACGGACTCGCCGCCGGCCTCGACCACGACCTGGAGACCGAGCTGGAAGCCGTCCGCAAGGTGGCGTCGGAGGCGAAGGGGCGCGCGGCGCGCGCGGAGGCGGAGGCGGCGCTGCAGGCGGCCGGCGTGGCGCGGCTGGAGGCGCAGCTGCAGCGCCTGCGCGCGCGGCAGGACCACCACGACGAGCGGGAGGAGCAACTCAAGCACGAGCGCCGCAAGCTGCAGCGAGAGGCAAGGGAAGCGCTCAACCGAGTCGAAGAGCTGGAGACAGAGAACAGCCACCTGACGAAACGACTCGACAAACTCAAGAACGCCAAGTCAGCCCTACTGAAGGACCTGTGA
- Protein Sequence
- MGHRSEVATPDNSDEESGDAFTDGDFGDSDDDSVLEINDAKSSNIPVNETVNKEIEESSINNGNYSHNGHETSPAEDQTTVNGRKNSDNHSDVENFSATSEVRRDSHGDQNPSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRSGPRLAAVSPAASLVLSPRRSSEDSADDTFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALHYQLELLKDRILELQEEHAQLQREHREKCSAHERLKREHVSLERELTGARDAVRARDAAAAAAGFAFAEAAGGVGDEPAGGGQGFGAVPPLALLSHASDQALADQGEGTLDVRLQRLVGAKQALESEVRKLKLALNDERAARHNGLAAGLDHDLETELEAVRKVASEAKGRAARAEAEAALQAAGVARLEAQLQRLRARQDHHDEREEQLKHERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00250477;
- 90% Identity
- -
- 80% Identity
- -