Efus019466.1
Basic Information
- Insect
- Ennomos fuscantarius
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_905220475.1
- Location
- HG992027.1:15902651-15917233[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.31 9.3e+03 -3.7 0.7 67 90 80 103 37 107 0.60 2 3 1.2e-76 3.5e-72 243.9 25.8 1 297 124 407 124 410 0.89 3 3 1 3e+04 -7.3 12.1 10 44 426 464 406 484 0.48
Sequence Information
- Coding Sequence
- ATGGGGCATCGATCAGAAGTGGCCACGCCTGATAACAGCGACGAGGAGAGCGGCGATGCCTTCACTGACGGAGACTTCGGAGACTCGGACGATGACACTGTTCTCGAACAAAGTGATACTAAATCTTCAAACATCCCCGTTAACGAGACGGTCAATGAGTCAATAGAGAAAAGTATTACCAATGGGAACTGCTCCCATAATGAGCATGAGGCATCACCTGCGGAAGATCAGCCAAAAGTAAACGGACGTAAGAATACTGACAGTCAAAGTGATGTGGAAAATTATAGTGCATCTTCTGAAGTGAGACGAGATTCACATGGAGATCAAAATCCTTCTATTGTTGGGATCCTTGGAGACCAGCATAATCATGCGGAACAGCGGCTAGCAGCGCGGCGCGCGGCGCGGGCAGAGGCGCGCGAGATACGCATGCGAGAACTAGAGCGGCAACAACGGGAACAAGAGGACCATGCCGATAAGGCGTATGACATGTATGCAGAGACAGTCGGCCGGCGCGGCGGCACGCGACTCGCGGCACTCAGCCCCGCCGCTAGTCTGGTGCACTCGCCGCGGCGGAGTTCCGAGGACTCAGCGGATGACACCTTTAACATTAAGGACTTAAGGCACGAGCTAAAAGAAGTAGAGGAGAAGTTCCGCAAGGCGATGATCCTAAACGCGCAGCTGGACAACGATAAAGCGGCGCTACATTACCAGCTGGAACTGCTGAAGGATCGCATCTTAGAGCTGCAAGAAGAACATGCGCAATTGCAGCGCGAACACAAAGAGAAATGTTCAGCGCACGAGCGTCTAAAACGCGAGCACGTAGCTCTGGAGCGCGAACTAACGGGCGCGCGCGACTCGGTGCGAGCCAGGGACGCCGCCGCCGCCGCCGCGGGCTTCGCCTTCGCCGAGGCCGCGCCCGGAGCCACTCACGCCGAGGGGTTCGGGGCTGTGCCGCCCCTGGCGCTACTGTCCCAGGAACAGGAGCAAGCGCTGGCTGACCAGGGAGAGGGCACGCTTGACGTGCGGTTGCAGAAGTTAGTTACAGCTAAACAAGAGCTAGAATCGGAAGTTCGTAAACTGAAGATCACTCTGAACGAGGAGCGAGCGGCGCGACAAAACGGTGTCGCAGGACGACACGACCAAGATCTAGAGGAAGAGTTGGAGACGCTGCGGCGGTCGGTGTCGGAGGCGAAGGGGCGCGCGGCGCGGGCGGAGGCGGAGGCGGCGCTGCAGGCGGCCGGCGTGGCGCGCCTCGAGGCGCAGCTGCAGCGCCACCGCGCGCTCAGCGACGCGCGCGACGCCAGGGAGGACCAGCTGCACCAGGAGCGCCGCCGGCTGCAGCGGGAGGCTAGAGAAGCACTCAACCGGGTTGAAGAGTTGGAGACGGAGAACAGCCACCTGACGAAACGGCTCGACAAGCTCAAGAACGCCAAGTCTGCACTACTCAAGGAACTGTGA
- Protein Sequence
- MGHRSEVATPDNSDEESGDAFTDGDFGDSDDDTVLEQSDTKSSNIPVNETVNESIEKSITNGNCSHNEHEASPAEDQPKVNGRKNTDSQSDVENYSASSEVRRDSHGDQNPSIVGILGDQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPAASLVHSPRRSSEDSADDTFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALHYQLELLKDRILELQEEHAQLQREHKEKCSAHERLKREHVALERELTGARDSVRARDAAAAAAGFAFAEAAPGATHAEGFGAVPPLALLSQEQEQALADQGEGTLDVRLQKLVTAKQELESEVRKLKITLNEERAARQNGVAGRHDQDLEEELETLRRSVSEAKGRAARAEAEAALQAAGVARLEAQLQRHRALSDARDAREDQLHQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00250477;
- 90% Identity
- -
- 80% Identity
- -