Ptre009912.1
Basic Information
- Insect
- Pheosia tremula
- Gene Symbol
- retn
- Assembly
- GCA_905333125.1
- Location
- HG995413.1:6270266-6276499[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-20 1.4e-16 60.8 0.0 15 89 3 75 1 75 0.94 2 2 4.3 1.2e+04 -3.1 0.0 25 38 207 220 169 221 0.66
Sequence Information
- Coding Sequence
- ATGTGTAAGGAGAGCACTCCCATCAACCGGCTGCCAATAATGGCCAAGTCTGTGCTGGATCTATACGAGCTGTACAACCTGGTGATCGCTCGCGGTGGCCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTTCGGCTGCCATCGTCCATCACGTCTGCTGCCTTTACGTTACGGACACAATACATGAAGTATCTGTACGACTATGAGTGCGAGAAGAAGAACCTTTCTACCAGGAACGAGCTGGATGCCGCCATCGAAGGCAACAAGCGCGAGGGGCGGCGCGCCTCGGGACAGTACGACGCACAAGCTGCATTAGCTATGCCACCGCTGAACCGCGTGCCAGCGTCCCTGGCCCAACTGTCCCAGCACATGCAGCCCCTCTCGCTGTCCCTGGGCGGGGGGGTGCCGGGGGTGCCGCGCCTCCCGCCCCTGCCGCCCCACGCCCCGCACATCTCCCAGCACGACATAGAGTACAGAGTACGGGAATACATGAAGATGATACAGCAACAAAGGGAGCTTATGAGAAATGGCTCCGAGTCCCCTCCGGGTGCGAACGGGCCCGCGCCGATCATGTCTCCTCGGGATGCCGCCGCGCTCAGCGCTATCGACGTCTCCCGCCTCACGCTGTGGTCTCTCTACAACAACAATAATAACAACAGCCCGCAACCTGATTTGGAACCACAACGTGAAGCCCTAAACCTAAGCGAGAGTCCAAACTCTAGCCTGAGCGGTGTGAAGCGCGAGGCGTGTCGGTCGCCGGCGCCGCCCGCCAAGCGGCGCACGCCGCGCCCCGCCTCGCCGCGCGCGCCCAGCCCGCCGCGCGCGCGCCTGCCCAGCCCGCCGCACGCGCAGCTCAACGGCACGCCGCCAAGCAATGGCGTTCATGGTGCTGCCTTCAAGATCACTACCCGAGGTGATGCAAACACAGGAGATCAGCAACTTGTCGTCTCAATAGAACTGAATGGAGTCACGTACGAAGGAGTGCTGTTTCCATCACAGAATAGCAGCGGACAGAACGGACACAGACAGATGGTCTCCTAA
- Protein Sequence
- MCKESTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRNELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVPGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGANGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSSLSGVKREACRSPAPPAKRRTPRPASPRAPSPPRARLPSPPHAQLNGTPPSNGVHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNSSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00636054;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -