Dpin021307.2
Basic Information
- Insect
- Dendrolimus pini
- Gene Symbol
- retn_1
- Assembly
- GCA_949752895.1
- Location
- OX457141.1:13508814-13517501[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-20 7.7e-17 62.4 0.0 15 89 6 78 1 78 0.94 2 2 9 3.5e+04 -3.9 0.0 26 38 212 224 200 225 0.74
Sequence Information
- Coding Sequence
- atgcaagcggcccttagtaaagGTACACCTATAAATCGGCTTCCCATTATGGCGAAATCAGTGCTAGATCTCTACGAACTTTACAACCTGGTGATAGCTAGAGGTGGTCTGGTTGAGGTGATAAACAAGAAACTATGGCAAGAGATCATCAAAGGACTTCGGTTGCCGTCATCCATCACGTCTGCTGCTTTTACATTGCGCACACAATATATGAAATACTTGTATGACTACGAGTGTGAAAAGAAGAACTTGTCCACTCGCAGCGAGTTGGACGCGGCAATCGAGGGCAACAAACGTGAAGGCAGACGAGCTTCCGGACAATATGACGCACAAGCGGCACTAGCTATGCCGCCGCTAAGCCGTGGAGTGCCAGCCTCCTTGGCACAGCTGTCACAGCACATGCAGCCGCTGTCACTCTCCCTGGGCGGCGGTGTGGCGGGGGTCCCCCGACTGCCTCCTCTACCGCCCCACGCACCACATATCGCTCAACATGACATTGAATATCGCGTGCGGGAGTACATGAAGATGATCCAGCAGCAGCGGGAGCTTATGAGAAACGGATCGGAATCCCCGCCGGGCGGCAATGGACCCGCGCCGATGATGTCCCCGCGCGACGCGGCCGCGCTGAGCGCGATCGACGTGTCGCGGCTGACGCTGTGGTCCctttacaacaacaacaacaacagccCGCAACCCGACCTCGAGCCACAACGTGAGGCGTTGAATTTAAGCGAGAGTCCAAACTCGAGTACGAGCGGGGGCAAGCGCGAAGCGTGCCGGTCGCCGCCGCCACCAGCGAAGCGGCGCACCCCGCGCCCTCCCTCCCCGCGCCACCCCTCGCCCTCACCGCCCCGCCAGCCGTGCAGCCTGCCCGCCACGCCGCAGCCGCAGCTCAACGGACCCGCGACCAACGGCATCCATGGAGCCGCCTTCAAAATCACAACCAGAGGTGACGCAAACACCGGCGATCAGCAACTGGTTGTCTCAATAGAACTTAACGGTGTGACGTACGAAGGTGTACTATTCCCATCACAAAACAGCAACGGCCAGAATGGTCACAGGCAAATGGTTTCTTAa
- Protein Sequence
- MQAALSKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHIAQHDIEYRVREYMKMIQQQRELMRNGSESPPGGNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRHPSPSPPRQPCSLPATPQPQLNGPATNGIHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNSNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818932;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -