Mfla005455.1
Basic Information
- Insect
- Mecyna flavalis
- Gene Symbol
- retn
- Assembly
- GCA_949319885.1
- Location
- OX439412.1:10739255-10744702[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-20 2.9e-16 60.5 0.0 17 89 19 89 11 89 0.93 2 2 6.8 2.1e+04 -3.1 0.0 25 38 221 234 183 235 0.66
Sequence Information
- Coding Sequence
- ATGAGTAATTTAGAAAATTCAACTCCAACTTCAACCTTCCACTCTCTTGTTCCAGGAACACCAATCAACCGGCTCCCAATCATGGCCAAGTCAGTTCTGGACCTATACGAGCTGTATAACCTGGTGATCGCGCGCGGCGGCCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTCAGGCTGCCGTCGTCCATCACATCTGCTGCCTTCACTTTACGTACACAATACATGAAGTACTTGTACGACTACGAGTGCGAGAAGAAGAACCTGTCGACGCGCAGCGAGCTGGACGCGGCCATAGAAGGCAACAAGCGCGAGGGCAGGCGCGCCTCTGGGCAGTACGACGCGCAAGCGGCGCTGGCTATGCCGCCACTGAGCCGCGGGGTGCCTGCGTCGCTCGCGCAGCTCTCCCAGCACATGCAGCCCCTGTCCCTCTCGCTCGGTGGGGTGGGGGGCGTCCCCCGCCTGCCTCCACTGCCCCCCCACGCGCCACACATCTCGCAGCACGACATCGAGTACCGCGTGAGGGAGTACATGAAGATGATACAGCAGCAACGAGAGCTGATGAGGAATGGTTCCGAATCGCCCCCCGGGTCGAACGGGCCTGCCCCCATCATGTCCCCCCGAGACGCGGCGGCCCTCAGCGCCATCGACGTGTCGCGTCTCACGCTGTGGTCCCTCTACaataacaacaacaacagcCCGCAACCAGACCTGGAGCCACAACGCGAGGCCCTGAACCTGAGCGAGAGCCCTAACTCGAGCACGAGCGGAGGCAAGCGCGAGGCGTGCcggtcgccgccgccgcccgccaaGCGGCGCACGCCGCGGCCGGCGTCCCCGCGCGCGCCGTCCCCCCCGCGCAACCCGCCGCCCGTCAACGGCAGCCCCCCCGCGAACGGCGTCAACGGGGCCGCCTTTAAGATCACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTCGTCGTATCGATAGAACTGAACGGAGTCACATACGAGGGAGTCCTGTTCCCATCACAGAACGGCAATGGACAGAACGGCCACAGGCAAATGGTGTCTTAA
- Protein Sequence
- MSNLENSTPTSTFHSLVPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLSRGVPASLAQLSQHMQPLSLSLGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELMRNGSESPPGSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPASPRAPSPPRNPPPVNGSPPANGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818932;
- 90% Identity
- iTF_00006076;
- 80% Identity
- -