Eint007808.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia inturbata
Gene Symbol
-
Assembly
GCA_963662085.1
Location
OY759183.1:5126295-5146073[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 8.6e-05 0.0063 17.5 2.2 1 23 413 435 413 435 0.97
2 20 0.0003 0.022 15.8 1.0 1 20 441 460 441 463 0.94
3 20 0.00074 0.055 14.6 5.6 1 23 482 504 482 504 0.98
4 20 0.0001 0.0077 17.3 4.1 1 23 510 532 510 532 0.99
5 20 4e-05 0.0029 18.6 5.3 1 23 538 560 538 560 0.97
6 20 5.7e-06 0.00042 21.2 8.4 1 23 566 588 566 588 0.97
7 20 2.6e-06 0.00019 22.3 3.0 1 23 594 616 594 616 0.97
8 20 0.00011 0.008 17.2 6.7 1 23 622 644 622 644 0.97
9 20 2.1e-05 0.0015 19.5 6.4 1 23 650 672 650 672 0.98
10 20 5.3e-07 3.9e-05 24.5 1.9 1 23 678 700 678 700 0.98
11 20 5.4e-05 0.0039 18.2 7.9 1 23 706 728 706 728 0.98
12 20 0.00014 0.01 16.8 6.8 1 23 734 756 734 756 0.97
13 20 4.4e-06 0.00032 21.6 5.6 1 23 762 784 762 784 0.98
14 20 1.9e-05 0.0014 19.6 6.7 1 23 790 812 790 812 0.97
15 20 3.7e-06 0.00027 21.8 5.2 1 23 818 840 818 840 0.98
16 20 2.1e-06 0.00015 22.6 3.6 2 23 847 868 846 868 0.98
17 20 1.9e-05 0.0014 19.6 8.1 1 23 874 896 874 896 0.97
18 20 1.8e-06 0.00013 22.8 6.5 1 23 902 924 902 924 0.98
19 20 0.00048 0.035 15.2 0.3 1 23 931 953 931 953 0.97
20 20 0.4 29 6.0 5.7 1 23 963 985 963 985 0.98

Sequence Information

Coding Sequence
ATGAATCCCGAGCATCATAATATCAATACGGGCGGGGGCCAACCTCCTGGGAGTTCGGAGTCTCAAAATCAAAGAGTACAAGCTCAGCAGCAGCAGCAAGTAAGCCTGCCTGTCACCACGTCTGCCACCGACTTGCGAGTCAACTCTGCAGCTGTGAACGTTGCTTTGTCTAGTGTTGCAAAGTACTGGGTATTTACGAATTTATTTCCCGGACCTATTCCTCAAGTGTCCGTCTACGGGCTTCCAACTGGGACAAGAATTGAGAATGGAAAAGCTGTTCAGgATCTTGGACAAGCACATGCAAGTTTACTCAATGGGGATCCAAACATCATTCTCGGACATCACGGAGGACAGTCTCAAGTCACAGTATCTGCTGCCCAACAGATACCCGTCTCCCAAATCATTGCCACACAGTCTGGGCAGACACATGAAGCATTGGTGGCACATAGTCAACAGCAAGAGCTACAGGCTTCCAACCAGATCACCACATCGCATCACCAGGTACCCACTAACCGGGTCGAATTTGTCCAACACCATAACATTGATATGGGACACCATTCTCAACAACAACATCTAATGCAGCAGCAGCTTATGGCAGCGTCAAGGCCAGAACACTCAAACCAACAGATCCAACTGACTGTCAGTGAAGACGGCATCGTGACGGTCGTAGAGCCAGGCAGCAGTAAAATGGCGGAGAAGGAAGAGATGCATGAGACTATCAAGCTGCCGGCAGATCATACGCTCACCGTGCATCAGTTGCAGCAGATTGTTGGCCAACAAGTGCTGGACAGCGTGGTTCGCATCGAGCAAGCGACCGGCGAACCCGCTAACATCCTAGTCACCCACAACCCTGACGGTACGACGTCGATCGAAGCTAGCGCTAGCGATCCGCTCGCTATCGTCAAAGATGAGAAGAACCAAGGAAAGATTGATACGGCGCAGTTCGCCATACCTGCTGAGATCAAGGAAATGAAGGGCATTGATTTAAAGTCCGTCAATGCCATGAACATGGAAGGCGCTGTAGTGAAGATATCAACGGGCGCGCCAGAACACGATCTTCACGCCATGTACAAAGTAAACGTCGAGGATCTGTCGCAACTGCTGGCCTACCACGAAGTCTTCGGGAAAATGGGACCCGATGGTCAGCCTCAGGCTAAAGTCTCTGTAGGCGATGTAGAAATAGAAGTGCCTGGAACGAGTTCCGgcatgtccgaagcggagaacTCGCCCGGACACCATTCCTGTGACATCTGCGGGAAAATATTCCAATTCCGATATCAGCTAATCGTACACAGACGTTACCACGGCGAGACCAAGCCTTTCACATGCCAAGTTTGCGGCACCTCATTCGCGAACCCCGTAGAACTATCCCGGCACGGGAAGTGCCATTTGGCAGGTGACCCGGCTGAAAGACACGCAAAGAGAATGGCCCAAGACAAACCTTATGCATGCTCCACTTGCCATAAAACATTCTTGCGTAAGGAGCACCTAAACAACCACGTACGCAGTCACACGGGAGAAACTCCATACAGATGCGAGTTCTGCGCCAAAACATTCACCCGGAAAGAACACATGGTAAACCACGTGCGAAAACATACGGGAGAGACGCCGCATCGCTGTGATATCTGCAAGAAGAGCTTTACAAGGAAGGAGCATTTTATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCACCATTGTACGATTTGTGGGAAGAAATATACTAGAAAGGAACATTTGACGAATCATATGAGATCTCACACGAACGATACCCCGTTCCGCTGTGATCAGTGCGGAAAATCCTTCACGAGAAAAGAGCATTACTCCAATCACATTTTGTGGCACACTGGCGAAACCCCTCACCGCTGCGACTTCTGCTCAAAAACCTTCACCCGCAAGGAGCATCTCCTAAACCACGTGAGACAACACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCTAAGTCGTTCACGCGGCGCGAGCATCTCGTGAACCACGTCCGGCAACACACGGGGGAGACGCCCTTCCAATGCGGATACTGTCCTAAAGCTTTTACTAGGAAAGATCATTTAGtAAATCACGTTCGACAACACACCGGTGAATCTCCCCACAAGTGCTCGTTCTGCACGAAATCCTTCACTCGCAAGGAGCACCTCACGAACCACGTGAGGCAACACACGGGCGAGTCTCCCCATCGCTGTACGTTCTGCGCTAAGTCTTTCACGAGGAAAGAGCATCTTACCAATCACGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGCGCGTTTTCGAGAAAGGAGCATCTGAACTCTCACCTGCGGCAGCACACGGGCGTCACTCCGCACTCCTGCTCTTACTGTAGCAAGACCTTCACGAGGAAGGAGCATCTCGTCAATCACGTACGGAAACACACTGGCGAAACACCGTTCAAGTGCACGTTCTGTTCGAAGTCATTTTCGCGCAAGGAGCATCTAACGAATCACATAAATCTGCACACGGGGGAGACGCCGAACAAATGTCCATTCTGCACTAAATCCTTCTCTAGGAAGGAACATCTTACGAACCATGTCAGAATACACACAGGCGAGTCGCCGCACCGCTGTGATTTCTGCCAGAAAACGTTCACTCGCAAGGAACATTTGACGAACCATATGAAACAGCACACGGGTGGCGCTGCTCACACGTGTAAGATTTGCCAGAAACCATTCACAAGGAAAGAACATCTACAGACGCATATGAGGTACCACAGTTGTAGCGACCGACCGTTCAGTTGTGGAGAATGCGGCAAATCCTTCCCACTGAAGGGTAATCTTATGTTCCACGAGCGGTCTCACAACAAATCCGGAGGAGGCCCGAGGCCTTTCCGCTGCGATATCTGTTCCAAGGACTTTTTGTGCAAATCTCATTTACTAACTCACCGGCGGGTACACGAGGACGCCGGCGACGAAGCCTCTGCAGAAACCCAGGCTGAGAATGAAGAGTGCTTGACCGTCACCACAGATTGCACCAATAAATGCATCAAGGTGGAGCTTGACACTGCAGAACAAAGGCAACTCAGCGGTGGACACCTCTGCGGGCCTACTGGTGGGAAAACCGTACGGTGGAGTAGTCATTCTCTGGAGGAAGGGTATTTTTGA
Protein Sequence
MNPEHHNINTGGGQPPGSSESQNQRVQAQQQQQVSLPVTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHASLLNGDPNIILGHHGGQSQVTVSAAQQIPVSQIIATQSGQTHEALVAHSQQQELQASNQITTSHHQVPTNRVEFVQHHNIDMGHHSQQQHLMQQQLMAASRPEHSNQQIQLTVSEDGIVTVVEPGSSKMAEKEEMHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASASDPLAIVKDEKNQGKIDTAQFAIPAEIKEMKGIDLKSVNAMNMEGAVVKISTGAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVSVGDVEIEVPGTSSGMSEAENSPGHHSCDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCDQCGKSFTRKEHYSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHINLHTGETPNKCPFCTKSFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGGAAHTCKICQKPFTRKEHLQTHMRYHSCSDRPFSCGECGKSFPLKGNLMFHERSHNKSGGGPRPFRCDICSKDFLCKSHLLTHRRVHEDAGDEASAETQAENEECLTVTTDCTNKCIKVELDTAEQRQLSGGHLCGPTGGKTVRWSSHSLEEGYF