Basic Information

Insect: Scotopteryx bipunctaria
Gene Symbol: -
Assembly: GCA_949320045.1
Location: OX439452.1:3705303-3721627[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.3e-05 0.0055 17.4 2.2 1 23 416 438 416 438 0.97

2 20 0.00032 0.019 15.7 1.0 1 20 444 463 444 466 0.94

3 20 0.0008 0.047 14.5 5.6 1 23 485 507 485 507 0.98

4 20 0.00011 0.0067 17.2 4.1 1 23 513 535 513 535 0.99

5 20 4.3e-05 0.0025 18.5 5.3 1 23 541 563 541 563 0.97

6 20 6.1e-06 0.00036 21.2 8.4 1 23 569 591 569 591 0.97

7 20 8.2e-07 4.9e-05 23.9 2.9 1 23 597 619 597 619 0.98

8 20 0.00012 0.007 17.1 6.7 1 23 625 647 625 647 0.97

9 20 2.2e-05 0.0013 19.4 6.4 1 23 653 675 653 675 0.98

10 20 5.6e-07 3.4e-05 24.4 1.9 1 23 681 703 681 703 0.98

11 20 5.7e-05 0.0034 18.1 7.9 1 23 709 731 709 731 0.98

12 20 0.00015 0.009 16.8 6.8 1 23 737 759 737 759 0.97

13 20 4.7e-06 0.00028 21.5 5.6 1 23 765 787 765 787 0.98

14 20 7.9e-06 0.00047 20.8 5.9 1 23 793 815 793 815 0.97

15 20 1.3e-05 0.00075 20.2 5.2 1 23 821 843 821 843 0.98

16 20 2.7e-06 0.00016 22.3 3.8 2 23 850 871 849 871 0.98

17 20 1.9e-05 0.0012 19.6 8.0 1 23 877 899 877 899 0.97

18 20 8.1e-06 0.00048 20.8 6.6 1 23 905 927 905 927 0.98

19 20 0.00039 0.023 15.5 0.3 1 23 934 956 934 956 0.97

20 20 0.036 2.1 9.3 6.0 1 23 966 988 966 988 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.3e-05	0.0055	17.4	2.2	1	23	416	438	416	438	0.97
2	20	0.00032	0.019	15.7	1.0	1	20	444	463	444	466	0.94
3	20	0.0008	0.047	14.5	5.6	1	23	485	507	485	507	0.98
4	20	0.00011	0.0067	17.2	4.1	1	23	513	535	513	535	0.99
5	20	4.3e-05	0.0025	18.5	5.3	1	23	541	563	541	563	0.97
6	20	6.1e-06	0.00036	21.2	8.4	1	23	569	591	569	591	0.97
7	20	8.2e-07	4.9e-05	23.9	2.9	1	23	597	619	597	619	0.98
8	20	0.00012	0.007	17.1	6.7	1	23	625	647	625	647	0.97
9	20	2.2e-05	0.0013	19.4	6.4	1	23	653	675	653	675	0.98
10	20	5.6e-07	3.4e-05	24.4	1.9	1	23	681	703	681	703	0.98
11	20	5.7e-05	0.0034	18.1	7.9	1	23	709	731	709	731	0.98
12	20	0.00015	0.009	16.8	6.8	1	23	737	759	737	759	0.97
13	20	4.7e-06	0.00028	21.5	5.6	1	23	765	787	765	787	0.98
14	20	7.9e-06	0.00047	20.8	5.9	1	23	793	815	793	815	0.97
15	20	1.3e-05	0.00075	20.2	5.2	1	23	821	843	821	843	0.98
16	20	2.7e-06	0.00016	22.3	3.8	2	23	850	871	849	871	0.98
17	20	1.9e-05	0.0012	19.6	8.0	1	23	877	899	877	899	0.97
18	20	8.1e-06	0.00048	20.8	6.6	1	23	905	927	905	927	0.98
19	20	0.00039	0.023	15.5	0.3	1	23	934	956	934	956	0.97
20	20	0.036	2.1	9.3	6.0	1	23	966	988	966	988	0.99

Sequence Information

Coding Sequence: ATGAATCCGGATCACCATAATATCAATACGGGTGGAGGCCAGCCTCCTGGGAGTTCCGAGTCGCAGAATCAGAGAGTGCAGAGTCAGCAGCAACAGCACGTACAACACGTGAGCCTGCCACCGACGACATCGGCCACAGACCTACGAGTGAACTCTGCAGCTGTGAATGTTGCATTGTCCAGCGTTGCCAAGTATTGGGTGTTTACGAATTTATTCCCTGGACCGATCCCTCAAGTCTCCGTCTATGGACTACCCACTGGGACTAGAATTGAGAATGGAAAAGCAGTGCAGGACCTAGGACAGGCTCATGCTAGCATACTTAATGGAGACCCAAACATCATTCTTGGGCACCATGGAGGACAGCCCCAGGTTACAGTCTCCGCTGCACAACAGATACCCGTCTCACAGATCATCACCACACAGTCAGGCCAGACTCATGAAGCACTGGTGGCCCACAGTCAGCAGCAGGAGCTCCAGGCCTCCAACCAGGTGCAGGTCACCACCTCTCACCACCAGGTACCCAATAACCGGGTCGAATTTGTCCAACACCATAGCATTGATATGGGCCACCACGCACAACAGCAGCATATAATGCAGCAGCAGCTCATGGCGGCAGCGAGGCCAGAACACTCCAATCAGCAGATCCAGCTGACTGTGAGTGAGGATGGGATAGTAACTGTCGTGGAGCCCGGCAGCAGTAAGATGGTGGAGAAGGAAGACTTGCATGAGACCATCAAGCTACCAGCTGACCACACCCTGACTGTGCACCAGTTGCAGCAAATTGTTGGACAGCAAGTGCTAGATAGCGTGGTTCGCATAGAGCAAGCGACGGGCGAACCCGCTAATATTCTTGTCACTCACAACCCGGATGGGACCACGTCCATAGAGGCCAGCGCAGGAGACCCGCTCGCTATTGTCAAAGACGAGAAGAGCGGGGCAAAGATGGAGACGGCGCAGTTCGCGATTCCAACTGAAATAAAGGAGATGAAAGGCATCGATTTGAAGGCTGTAAATGCTATGAACATGGAAGGCGCCGTGGTAAAGATATCGACTGGCGCGCCGGAGCACGACCTGCACGCCATGTACAAAGTTAACGTGGAGGACTTGTCTCAGCTACTGGCCTATCACGAGGTCTTCGGCAAAATGGGGCCTGACGGACAGCCGCAGGCTAAAGTTAGTGATATAGAAATAGAGGTTCCTGGTACGAGTTCCGGTATGTCAGAAGCGGAGTCGTCGCCCGGACATCACTCTTGCGATATTTGTGGGAAAATATTCCAGTTCCGATATCAACTTATTGTTCACagACGTTACCACGCCGAGTCCAAGCCTTTTACGTGCCAAGTTTGCGGCACTTCATTTGCGAATCCCGTCGAACTTTCACGTCACGGGAAATGCCATCTTGCCGGCGACCCCGCTGAGAGGCACGCTAAGAGAATGGCCCAAGATAAGCCCTATGCTTGCTCCACTTGCCATAAAACGTTCTTGCGTAAGGAGCATCTAAACAACCACGTACGCAGTCACACGGGAGAAACTCCATATAGATGTGAATTTTGCGCGAAAACGTTCACTCGCAAGGAGCATATGGTAAACCACGTGCGGAAACACACCGGCGAGACGCCGCATCGGTGCGACATCTGCAAGAAAAGCTTCACGAGGAAGGAGCATTTCATGAACCATGTCATGTGGCATACAGGTGAAACTCCACATCATTGTACGATATGTGGAAAGAAGTATACGAGAAAGGAACATTTGACAAACCATATGAGATCGCACACGAACGATACTCCTTTCCGTTGCGATCTGTGCGGGAAGTCCTTCACAAGGAAAGAACACTACACCAATCACATTATGTGGCATACTGGCGAGACCCCGCACCGTTGCGACTTCTGCTCTAAAACATTCACACGTAAGGAGCATCTACTGAATCACGTTAGGCAACATACGGGTGAATCGCCTCACCGCTGTAACTACTGTTCGAAGTCATTCACGCGTCGCGAACATCTGGTCAACCACGTGAGACAACACACGGGGGAAACGCCCTTCCAGTGCGGATACTGCCCCAAAGCGTTCACTAGGAAAGACCACCTGGTGAACCACGTCCGCCAACACACTGGCGAGTCCCCACACAAGTGCTCTTTCTGCACTAAATCGTTTACGCGCAAGGAGCATCTGACGAACCATGTGCGTCAACATACCGGCGAGTCGCCGCACCGCTGCACATTCTGTGCCAAATCCTTCACCAGGAAGGAACATCTCACAAACCATGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGAGCGTTCTCGAGAAAGGAGCATCTGAACAGCCATCTGCGGCAACACACGGGGGTCACTCCGCACTCCTGTTCCTACTGTAACAAGACCTTCACGCGGAAGGAACACCTCGTCATTCACGTACGGAAACACACGGGCGAGACTCCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTCTCCAGAAAGGAGCATCTGACAAACCACGTGAATCTGCATACTGGGGAGACGCCGAACAAATGTCCCTTCTGCACCAAAACATTCTCTAGGAAGGAACACCTTACCAACCATGTCAGAATACACACTGGGGAATCCCCACATCGCTGTGAGTTCTGCCAAAAGACATTCACGAGGAAGGAACACCTCACGAACCATATGAAGCAACACTCTGGAGACGCGGCACACACGTGCAAGATTTGCCAGAAACCTTTCACCAAAAAGGAGCATCTACAAACGCACATGAGGTATCATACTTGCGGTGAGCGTCCGTACAGTTGCGGCGAATGCGGCAAATCATTCCCACTGAAGGGCAACCTGATGTTCCACGAGAGATCACACAACAAGGCGGGCGGCGGCCCCAGACCCTTCAGATGCGATATCTGTTCTAAGGATTTTATGTGCAAAGGGCATTTACTAACCCACCGGCGGACACACGAGGATGCGAGTGAGGAGGCCCCGGCAGAAGCTCCGGCGGAGACAGAGGAGTGCCTCACTGTCACCACAGATTGCACTAACAAATGCATCAAGGTTGAGCTGGAGACTGTTGAACGGACTGAACCAAGAACTTCAGTAGAAAATGGGCCAACTGAAAACAATGTAGTGGTGCAGCCTGCACTTAGCGATTCTACAAATCATATTGTGACACAAACCCAAAACACTGTCATGCAAATTAGCAGCCAAGTTCGCGCGCCAACCTCTAGCCCGAGTGGTGTGACGAGCACATTCTCTCACACGGTGACGACCCAGCACCATGCCGGCACCACCATCTCTCACCACCCCGTCACTGTGAATTACTAG
Protein Sequence: MNPDHHNINTGGGQPPGSSESQNQRVQSQQQQHVQHVSLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHASILNGDPNIILGHHGGQPQVTVSAAQQIPVSQIITTQSGQTHEALVAHSQQQELQASNQVQVTTSHHQVPNNRVEFVQHHSIDMGHHAQQQHIMQQQLMAAARPEHSNQQIQLTVSEDGIVTVVEPGSSKMVEKEDLHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDPLAIVKDEKSGAKMETAQFAIPTEIKEMKGIDLKAVNAMNMEGAVVKISTGAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVSDIEIEVPGTSSGMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHAESKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHYTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCNKTFTRKEHLVIHVRKHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPNKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHSGDAAHTCKICQKPFTKKEHLQTHMRYHTCGERPYSCGECGKSFPLKGNLMFHERSHNKAGGGPRPFRCDICSKDFMCKGHLLTHRRTHEDASEEAPAEAPAETEECLTVTTDCTNKCIKVELETVERTEPRTSVENGPTENNVVVQPALSDSTNHIVTQTQNTVMQISSQVRAPTSSPSGVTSTFSHTVTTQHHAGTTISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00701278;
80% Identity: -