Esil019627.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ecliptopera silaceata
Gene Symbol
-
Assembly
GCA_932527285.1
Location
CAKOBM010000119.1:340700-357254[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 8.7e-05 0.0052 17.4 2.2 1 23 410 432 410 432 0.97
2 20 0.0003 0.018 15.7 1.0 1 20 438 457 438 460 0.94
3 20 0.00075 0.044 14.5 5.6 1 23 479 501 479 501 0.98
4 20 0.00011 0.0063 17.2 4.1 1 23 507 529 507 529 0.99
5 20 4e-05 0.0024 18.5 5.3 1 23 535 557 535 557 0.97
6 20 5.7e-06 0.00034 21.2 8.4 1 23 563 585 563 585 0.97
7 20 1.9e-06 0.00011 22.6 2.8 1 23 591 613 591 613 0.98
8 20 0.00011 0.0065 17.1 6.7 1 23 619 641 619 641 0.97
9 20 0.00011 0.0065 17.1 6.5 1 23 647 669 647 669 0.97
10 20 5.3e-07 3.1e-05 24.4 1.9 1 23 675 697 675 697 0.98
11 20 1e-05 0.00062 20.3 7.7 1 23 703 725 703 725 0.98
12 20 0.00014 0.0084 16.8 6.8 1 23 731 753 731 753 0.97
13 20 1e-05 0.00061 20.4 6.0 1 23 759 781 759 781 0.98
14 20 1.9e-05 0.0011 19.5 6.7 1 23 787 809 787 809 0.97
15 20 1.2e-05 0.0007 20.2 5.2 1 23 815 837 815 837 0.98
16 20 2.5e-06 0.00015 22.3 3.8 2 23 844 865 843 865 0.98
17 20 1.8e-05 0.0011 19.6 8.0 1 23 871 893 871 893 0.97
18 20 1.4e-05 0.00081 20.0 5.2 1 23 899 921 899 921 0.96
19 20 0.0007 0.042 14.6 0.2 1 23 928 950 928 950 0.96
20 20 0.033 2 9.3 6.0 1 23 960 982 960 982 0.99

Sequence Information

Coding Sequence
ATGAATCAGGATCACCACAGTATCAATACGGGTGGGGGCCAACCTCCTGGGACTTCTGAGTCTCAGAATCAGAGAGTACAGGGTCAACAGCAGCAAGTGAGTTTGCCAGCAACTACGTCAGCCACTGACCTGCGAGTCAATTCGGCAGCTGTGAACGTTGCCTTGTCCAGCGTAGCTAAGTACTGGGTGTTTACCAATTTATTCCCTGGACCGATTCCTCAAGTCTCCGTCTATGGGCTACCTACTGGTACCAGGATTGAAAATGGGAAAGCAGTGCAGGACCTTGGACAAGCACATGCTAGCATTCTCAATGGGGACCCAAACATCATTCTTGGACATCACAGTGTGCAGCCACAAGTCACAGTGTCAGCAGCACAACAGATACCGGTCTCTCAAATTATTGCTACACAGTCTGGTCAGACCCATGAAGCATTGGTGGCACACAGTCAGCAACAGGAGCTCCAATCATCCAACCAGGTCCAAGTCACCACTTCTCATCACCAGGTACCCAATAATCGGGTCGAATTTGTCCAACACCATAGCATTGATATGGGTCATCATGCTCAGCAGCAGCATTTAATGCAGCAACAACTGCTAGCAGCGACGCGGCCGGACCACTCAAATCAACAGATTCAACTGACAGTCAGTGAAGACGGCATTGTAACTGTAGTGGAACCAGGCAGTAGCAAGATAGCTGAGAAGGAAGAAATGCATGAAGCTATCAAGATCCCTGAAAACAATATCACAGTACAACAGTTACAGCAAATAGTTGGACAGCAAGTACTGGACAGCGTGGTTCGCATCGAGCAAGCGACGGGCGAACCGGCTAACATTTACGTGACACACAACGCTGATGGAACCACATCTATCGAAGCCAGTGCTGGAGACCCATTGGCTGTCGTCAAAGATGAAAAGAACGGGAAGATGGAGACCGCTCAGTTCGCTATACCTACGGAAATTAAGGAGATGAAAGGCATCGATTTGAAGAGTGTGAATGCGATGAACATGGAAGGTGCAGTGGTCAAGATATCAACGGGCACGTCTGATCACGACCTTCACGCGATGTACAAAGTCAACGTTGAAGATCTTTCGCAGCTGTTAGCGTATCACGAAGTCTTCGGCAAAATGGGGCCGGACGGACAACCGCAAGCTAAAGTTGCTGATGTAGAAGTAGAAGTGCCAGGGACTAGCACGGGTATGTCCGAGGCAGAATCGTCGCCCGGTCACCACTCCTGTGATATTTGTGGAAAAATATTCCAGTTCCGGTACCAGCTTATTGTTCACAGACGATACCACGGAGAGTCCAAGCCTTTCACTTGCCAAGTTTGCGGTACGTCGTTTGCGAATCCCGTTGAACTATCCCGTCATGGGAAATGCCATCTTGCCGGCGACCCCGCTGAAAGGCATGCCAAGAGAATTGCTCAGGACAAACCTTATGCATGCTCTACTTGCCATAAAACGTTCTTGCGTAAGGAGCATTTAAACAACCATGTACGCAGTCACACTGGCGAAACTCCATACAGATGCGAGTTCTGCGCCAAAACGTTCACCCGTAAGGAGCATATGGTGAATCACGTGCGGAAACACACGGGAGAAACTCCGCATCGTTGTGACATCTGCAAGAAAAGCTTCACAAGAAAGGAGCACTTTATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCACCATTGCACAATTTGTGGGAAGAAGTATACTAGAAAGGAGCATTTGACAAACCATATGAGATCGCACACGAACGATACACCGTTTCGTTGCGATCTGTGCGGGAAATCATTCACGAGAAAGGAACACTACAGCAATCACATTATGTGGCACACTGGTGAAACTCCCCACCGCTGCGACTTCTGTTCGAAAACGTTCACACGTAAGGAGCATCTGTTGAATCACGTCAGACAGCACACGGGTGAATCACCGCATCGCTGCAACTTTTGTTCGAAATCCTTCACTCGGCGCGAACACTTGGTGAACCATGTGAGACAGCATACTGGGGAAACGCCATTCCAATGCGGATACTGCCCTAAAGCCTTTACAAGGAAAGATCATCTGGTGAACCACGTCCGTCAGCACACCGGTGAATCTCCCCACAAGTGCTCGTACTGTACGAAGTCGTTCACGCGCAAGGAACATCTGACGAATCACGTGAGACAGCACACGGGCGAATCGCCGCATCGGTGCACATTCTGCGCTAAATCATTCACGAGGAAGGAACATCTCACTAACCATGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGCGAGTTCTCGAGAAAGGAGCACCTGAACAGCCACCTTCGGCAACACACGGGCGTCACTCCGCATTCCTGCTCCTACTGTAGCAAGACCTTTACCAGGAAGGAGCATCTCGTCAACCACGTGCGGAAACACACTGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGTCATTCTCCCGCAAAGAGCATCTCACGAATCACGTGAATCTTCACACTGGGGAGACACCGAACAAATGCCCGTTCTGCACTAAAACCTTCTCTAGAAAGGAACATCTTACCAACCATGTCAGAATACACACGGGTGAATCACCGCACCGCTGTGAATTCTGCCAGAAGACGTTCACTCGGAAGGAGCACCTCACAAATCATATGAAACAGCACGCGGGAGACGCTCCTCACGCGTGCAAGGTTTGCCAGAAACCTTTCAGCAAGAAAGAGCATTTACAAACACATATgagATATCACTCTTCGGGCGAGCATCCGTTCATTTGTGGTGAATGCGGCAAATCATTCCCGCTGAAGGGGAATCTCATGTTCCACGAGAGATCTCACAATAAGTCGGGAGCGGGCCCTCGACCGTTCCGGTGCGATATCTGCTCCAAGGACTTTATGTGCAAAGGACATCTACTGACCCATCGGCGGACACACGTCGACGCGAGCGAGGAAGCCACCGCTGAGACGCAAACAGAATCTGAGGAATGTCTGATTGTGACCACCGACTGCACAAACAAATGCATCAAGGTGGAGCTCGAAACCGTCGACCAAAGATCTTCGATAGAAAATGGACCAGCTGAAAACGTAAATGTAGTTGTGCAGCCTACCATAAGTAATTCTACGAATCACATTGTGACGCAAACGCAAAATACTGTGATGCAGATAAGCAGCCAACAGGTACGCGTACCATCTGCAAGCCCGGTAGAATCGTCAGCCGAAACTTTTACCCACACAGTTTCGGCGCAGCACCATGCCGGCACAAGCATCTCCCACCATCCCGTAACCGTTAACTACTAG
Protein Sequence
MNQDHHSINTGGGQPPGTSESQNQRVQGQQQQVSLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHASILNGDPNIILGHHSVQPQVTVSAAQQIPVSQIIATQSGQTHEALVAHSQQQELQSSNQVQVTTSHHQVPNNRVEFVQHHSIDMGHHAQQQHLMQQQLLAATRPDHSNQQIQLTVSEDGIVTVVEPGSSKIAEKEEMHEAIKIPENNITVQQLQQIVGQQVLDSVVRIEQATGEPANIYVTHNADGTTSIEASAGDPLAVVKDEKNGKMETAQFAIPTEIKEMKGIDLKSVNAMNMEGAVVKISTGTSDHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVADVEVEVPGTSTGMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRIAQDKPYACSTCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHYSNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPREFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPNKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHAGDAPHACKVCQKPFSKKEHLQTHMRYHSSGEHPFICGECGKSFPLKGNLMFHERSHNKSGAGPRPFRCDICSKDFMCKGHLLTHRRTHVDASEEATAETQTESEECLIVTTDCTNKCIKVELETVDQRSSIENGPAENVNVVVQPTISNSTNHIVTQTQNTVMQISSQQVRVPSASPVESSAETFTHTVSAQHHAGTSISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00704247;
90% Identity
iTF_00701278;
80% Identity
-