Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000059.1:388768-409714[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.8e-05 0.0054 17.4 2.2 1 23 416 438 416 438 0.97

2 20 0.00031 0.019 15.7 1.0 1 20 444 463 444 466 0.94

3 20 0.00024 0.014 16.1 5.6 1 23 485 507 485 507 0.98

4 20 0.00011 0.0066 17.2 4.1 1 23 513 535 513 535 0.99

5 20 4.1e-05 0.0025 18.5 5.3 1 23 541 563 541 563 0.97

6 20 5.8e-06 0.00036 21.2 8.4 1 23 569 591 569 591 0.97

7 20 2.6e-06 0.00016 22.3 3.0 1 23 597 619 597 619 0.97

8 20 0.00011 0.0068 17.1 6.7 1 23 625 647 625 647 0.97

9 20 2.1e-05 0.0013 19.4 6.4 1 23 653 675 653 675 0.98

10 20 5.4e-07 3.3e-05 24.4 1.9 1 23 681 703 681 703 0.98

11 20 5.5e-05 0.0033 18.1 7.9 1 23 709 731 709 731 0.98

12 20 0.00015 0.0092 16.7 6.6 1 23 737 759 737 759 0.97

13 20 4.5e-06 0.00027 21.5 5.6 1 23 765 787 765 787 0.98

14 20 1.9e-05 0.0012 19.5 6.7 1 23 793 815 793 815 0.97

15 20 1.2e-05 0.00074 20.2 5.2 1 23 821 843 821 843 0.98

16 20 2.1e-06 0.00013 22.5 3.6 2 23 850 871 849 871 0.98

17 20 1.9e-05 0.0012 19.5 8.1 1 23 877 899 877 899 0.97

18 20 1.9e-06 0.00011 22.7 6.5 1 23 905 927 905 927 0.98

19 20 0.00049 0.03 15.1 0.3 1 23 934 956 934 956 0.97

20 20 0.72 44 5.1 5.7 1 23 965 987 965 987 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.8e-05	0.0054	17.4	2.2	1	23	416	438	416	438	0.97
2	20	0.00031	0.019	15.7	1.0	1	20	444	463	444	466	0.94
3	20	0.00024	0.014	16.1	5.6	1	23	485	507	485	507	0.98
4	20	0.00011	0.0066	17.2	4.1	1	23	513	535	513	535	0.99
5	20	4.1e-05	0.0025	18.5	5.3	1	23	541	563	541	563	0.97
6	20	5.8e-06	0.00036	21.2	8.4	1	23	569	591	569	591	0.97
7	20	2.6e-06	0.00016	22.3	3.0	1	23	597	619	597	619	0.97
8	20	0.00011	0.0068	17.1	6.7	1	23	625	647	625	647	0.97
9	20	2.1e-05	0.0013	19.4	6.4	1	23	653	675	653	675	0.98
10	20	5.4e-07	3.3e-05	24.4	1.9	1	23	681	703	681	703	0.98
11	20	5.5e-05	0.0033	18.1	7.9	1	23	709	731	709	731	0.98
12	20	0.00015	0.0092	16.7	6.6	1	23	737	759	737	759	0.97
13	20	4.5e-06	0.00027	21.5	5.6	1	23	765	787	765	787	0.98
14	20	1.9e-05	0.0012	19.5	6.7	1	23	793	815	793	815	0.97
15	20	1.2e-05	0.00074	20.2	5.2	1	23	821	843	821	843	0.98
16	20	2.1e-06	0.00013	22.5	3.6	2	23	850	871	849	871	0.98
17	20	1.9e-05	0.0012	19.5	8.1	1	23	877	899	877	899	0.97
18	20	1.9e-06	0.00011	22.7	6.5	1	23	905	927	905	927	0.98
19	20	0.00049	0.03	15.1	0.3	1	23	934	956	934	956	0.97
20	20	0.72	44	5.1	5.7	1	23	965	987	965	987	0.98

Sequence Information

Coding Sequence: ATGAATCCCGAGCATCATAATATCAATACGGGCGGGGGCCAACCTCCTGGGAGTTCAGAGTCTCAGAATCAAAGAATACAGGctcagcagcagcagcagcaagTAAGCCTGCCTGCCACCACGTCTGCCACCGACTTGCGAGTCAACTCGGCAGCTGTGAACGTTGCTTTGTCCAGCGTTGCAAAGTACTGGGTGTTTACGAATTTATTCCCCGGACCTATTCCTCAAGTGTCCGTCTACGGGCTTCCAACTGGGACAAGAATTGAAAATGGAAAAGCTGTTCAGgaTCTAGGACAAGCGCATGCTAGTATACTCAATGGGGATCCAAACATCATTCTGGGGCATCACGGAGGACAGTCCCAGGTCACAGTATCTGCCGCCCAACAGATACCCGTCTCCCAAATCATTGCCACACAGTCTGGGCAGACACATGAGTCATTGGTGGCACACAGTCAGCAGCAAGAGCTACAGGCTTCCAACCAGGTCACCACATCACACCATCAGCAGGTACCCACTAACCGGGTCGAATTTGTCCAACACCATAACATTGATATGGGACATCATTCTCAACAACAACAACATCTAATGCAGCAGCAGCTTATGGCGGCGTCAAGGCCAGAACACTCAAACCAACAGATCCAACTGACGGTCAGTGAAGACGGCATCGTGACGGTAGTAGAGCCAGGCAGCAGTAAGATGGCGGAGAAGGAAGAGATGCATGAGACGATCAAGCTGCCGACGGATCATACGCTCACAGTGCATCAGTTGCAGCAGATTGTCGGCCAACAGGTTCTAGACAGCGTGGTTCGCATCGAGCAAGCGACCGGCGAACCCGCTAACATCCTAGTCACCCACAACCCTGACGGCACCACGTCCATCGAGGCTAGCGCGAGCGATCCGCTCGCTATCGTCAAAGACGAGAAGATCCAAGGGAAGATTGAGACGACGCAGTTCGCTATACCGGCTGAGATTAAGGACATGAAGGGCATTGATTTGAAGGCCGTCAATGCCATGAACATGGAAGGCGCTGTAGTGAAGATATCAACGAGCGCGCCAGAGCACGATCTCCACGCCATGTACAAAGTAAATGTGGAGGATCTGTCGCAACTGCTGGCGTACCACGAAGTTTTCGGGAAAATGGGGCCGGATGGACAGCCTCAGGCTAAAGTTTCTGTTGGCGATGTAGAAATAGAAGTGCCTGGAACGAGTTCCGGTATGTCCGAAGCGGAGAACTCGCCGGGACACCATTCCTGTGACATCTGCGGGAAAATATTCCAATTCCGGTATCAGCTTATAGTACACagACGTTACCACGGCGAGACCAAGCCATTCACATGCCAAGTTTGCGGCACCTCATTCGCGAACCCCGTAGAACTATCCCGGCACGGAAAGTGCCATTTGGCAGGTGACCCGGCTGAAAGACACGCAAAGAGAATGGCCCAAGACAAACCTTATGCATGCTCCACTTGTCATAAAACATTCTTGCGTAAGGAGCACCTAAACAACCACATACGCAGTCACACGGGAGAAACTCCATACAGATGCGAGTTCTGCGCCAAAACATTCACCCGGAAAGAGCACATGGTGAATCACGTGCGAAAACATACGGGCGAGACGCCACATCGCTGTGATATCTGCAAGAAGAGCTTTACGCGGAAGGAGCATTTCATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCACCATTGTACGATTTGTGGGAAGAAATATACTAGAAAGGAACATTTGACGAATCATATGAGATCGCACACGAACGATACTCCGTTCCGCTGTGAACAGTGCGGGAAATCCTTCACAAGAAAAGAGCATTACTCCAATCACATTTTGTGGCACACTGgCGAAACCCCTCACCGCTGCGACTTCTGTTCTAAAACCTTTACTCGCAAGGAGCATCTCCTCAACCACGTGAGACAACACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCGTGAACCACGTCCGGCAACACACGGGAGAGACGCCCTTCCAATGCGGATACTGTCCTAAAGCTTTTACTAGGAAAGACCATTTAGtgAACCACGTTCGACAACACACCGGTGAATCTCCTCACAAGTGCTCGTTCTGCACGAAATCCTTCACTCGCAAGGAGCACCTCACGAACCACGTGAGGCAACACACGGGCGAGTCTCCCCATCGGTGTTCATTCTGCGCGAAGTCTTTTACGAGGAAAGAACATCTTACCAATCACGTCAGACAGCATACGGGCGAAACgccacacaagtgcacgtattgCCCGCGCGCGTTTTCGAGAAAGGAGCATCTGAACTCTCACCTGCGGCAGCACACGGGCGTCACTCCGCACTCCTGCTCTTACTGTAGCAAGACCTTCACGAGGAAAGAGCATCTTGTCAACCACGTACGGAAACACACCGGCGAAACACCGTTCAAGTGCACGTTCTGTTCGAAGTCATTTTCGCGCAAGGAGCATCTAACGAATCACGTAAATCTTCACACGGGGGAGACGCCGAACAAATGTCCATTCTGCACTAAATCCTTCTCTAGGAAGGAACATCTTACGAACCATGTCAGAATACACACAGGCGAGTCGCCGCACCGCTGTGATTTCTGCCAGAAAACTTTCACTCGCAAGGAACATTTGACGAACCATATGAAGCAGCACACGGGTGGCGCTGCTCACACGTGTAAGATTTGCCAGAAACCATTCACGAGGAAAGAACATCTACAAACGCATATGAGATACCACAGTTGTAGCGACCGGCCGTTCAGCTGTGGAGAATGCGGCAAATCCTTCCCGCTGAAGGGTAATCTCATGTTCCACGAGCGGTCTCACAACAAATCCGGAGGCCCAAGGCCTTTCCGTTGTGATGTCTGCTCCAAGGACTTTTTGTGCAAATCTCATTTGCTAACTCACCGGCGAGTACACGAGGACGCCTGCGACGAAGTCTCTGTAGAGACTCAGACTGAGAATGAAGAGTGCTTGGCAGTCACCACAGATAGCACCAATAAAGGCATCAAGGTGGAGCTTGACACGCCAGATCAAAGAACTTCTGTAGAAAATGGACCAACTGAAACGATTACAGTGCAGCCTGCAATCAATTCCCCGAACCACATAGTAGTCACTCAAAACACTGTGATGCAGATAAGCAGTCAACAGGTACGAGTAGGGTCATCAAGTCCATCTGGTGTAACCACGGGCACTTTCACCCACACAGTGAGCGCACAGCACCACCCAGGTTCCACGATCGCGCACCACCCAGTTACAGTGAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSSESQNQRIQAQQQQQQVSLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAAQQIPVSQIIATQSGQTHESLVAHSQQQELQASNQVTTSHHQQVPTNRVEFVQHHNIDMGHHSQQQQHLMQQQLMAASRPEHSNQQIQLTVSEDGIVTVVEPGSSKMAEKEEMHETIKLPTDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASASDPLAIVKDEKIQGKIETTQFAIPAEIKDMKGIDLKAVNAMNMEGAVVKISTSAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVSVGDVEIEVPGTSSGMSEAENSPGHHSCDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHIRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCEQCGKSFTRKEHYSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPNKCPFCTKSFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGGAAHTCKICQKPFTRKEHLQTHMRYHSCSDRPFSCGECGKSFPLKGNLMFHERSHNKSGGPRPFRCDVCSKDFLCKSHLLTHRRVHEDACDEVSVETQTENEECLAVTTDSTNKGIKVELDTPDQRTSVENGPTETITVQPAINSPNHIVVTQNTVMQISSQQVRVGSSSPSGVTTGTFTHTVSAQHHPGSTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00701278;
80% Identity: -