Basic Information

Insect: Horisme vitalbata
Gene Symbol: -
Assembly: GCA_951804965.1
Location: OX638088.1:6936799-6960479[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00011 0.0086 17.3 1.5 1 23 411 433 411 433 0.96

2 20 0.00036 0.028 15.7 1.0 1 20 439 458 439 461 0.94

3 20 0.0007 0.055 14.8 5.1 1 23 480 502 480 502 0.98

4 20 0.00012 0.0097 17.2 4.1 1 23 508 530 508 530 0.99

5 20 4.7e-05 0.0037 18.5 5.3 1 23 536 558 536 558 0.97

6 20 6.7e-06 0.00053 21.2 8.4 1 23 564 586 564 586 0.97

7 20 3.2e-06 0.00025 22.2 2.6 1 23 592 614 592 614 0.97

8 20 0.00013 0.01 17.1 6.7 1 23 620 642 620 642 0.97

9 20 0.00013 0.01 17.1 6.5 1 23 648 670 648 670 0.97

10 20 0.0084 0.66 11.4 4.1 1 16 676 691 676 704 0.96

11 20 6.3e-05 0.0049 18.1 7.9 1 23 710 732 710 732 0.98

12 20 0.00017 0.013 16.8 6.8 1 23 738 760 738 760 0.97

13 20 5.2e-06 0.00041 21.5 5.6 1 23 766 788 766 788 0.98

14 20 6.9e-06 0.00054 21.1 6.6 1 23 794 816 794 816 0.97

15 20 1.4e-05 0.0011 20.2 5.2 1 23 822 844 822 844 0.98

16 20 2.4e-06 0.00019 22.5 3.6 2 23 851 872 850 872 0.98

17 20 2.1e-05 0.0017 19.6 8.0 1 23 878 900 878 900 0.97

18 20 3.9e-06 0.0003 21.9 6.5 1 23 906 928 906 928 0.98

19 20 0.00043 0.033 15.5 0.3 1 23 935 957 935 957 0.97

20 20 0.054 4.2 8.9 5.0 1 23 967 989 967 989 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00011	0.0086	17.3	1.5	1	23	411	433	411	433	0.96
2	20	0.00036	0.028	15.7	1.0	1	20	439	458	439	461	0.94
3	20	0.0007	0.055	14.8	5.1	1	23	480	502	480	502	0.98
4	20	0.00012	0.0097	17.2	4.1	1	23	508	530	508	530	0.99
5	20	4.7e-05	0.0037	18.5	5.3	1	23	536	558	536	558	0.97
6	20	6.7e-06	0.00053	21.2	8.4	1	23	564	586	564	586	0.97
7	20	3.2e-06	0.00025	22.2	2.6	1	23	592	614	592	614	0.97
8	20	0.00013	0.01	17.1	6.7	1	23	620	642	620	642	0.97
9	20	0.00013	0.01	17.1	6.5	1	23	648	670	648	670	0.97
10	20	0.0084	0.66	11.4	4.1	1	16	676	691	676	704	0.96
11	20	6.3e-05	0.0049	18.1	7.9	1	23	710	732	710	732	0.98
12	20	0.00017	0.013	16.8	6.8	1	23	738	760	738	760	0.97
13	20	5.2e-06	0.00041	21.5	5.6	1	23	766	788	766	788	0.98
14	20	6.9e-06	0.00054	21.1	6.6	1	23	794	816	794	816	0.97
15	20	1.4e-05	0.0011	20.2	5.2	1	23	822	844	822	844	0.98
16	20	2.4e-06	0.00019	22.5	3.6	2	23	851	872	850	872	0.98
17	20	2.1e-05	0.0017	19.6	8.0	1	23	878	900	878	900	0.97
18	20	3.9e-06	0.0003	21.9	6.5	1	23	906	928	906	928	0.98
19	20	0.00043	0.033	15.5	0.3	1	23	935	957	935	957	0.97
20	20	0.054	4.2	8.9	5.0	1	23	967	989	967	989	0.98

Sequence Information

Coding Sequence: ATGAATCCTGAGCACCACAATATCAATACGGGTGGCGGCCAGCCTCCTGGGAGCTCGGAGTCCCAGAATCAGAGAGTGCAGTCTCAACAGCAACAGCAAGTTAGTCTACCTGCAACCACCGCTGCCACTGACCTACGAGTCAATTCCGCAGCTGTGAACGTTGCTTTGTCTAGCGTTGCAAAGTATTGGGTGTTTACGAATTTATTCCCTGGACCTATACCCCAAGTATCCGTTTACGGGCTACCTACTGGAACAAGAATAGAAAATGGGAAAGCAGTGCagGATCTTGGTCAAGCACATAGCATTCTCAATGGGGATCCAAACATCATACTTGGACACCATGGTGGGCAGTCTCAAGTCACAGTATCCGCTGCCCAACAGATTCCCGTCTCACAAATCATCGCCACACAGTCTGGCCAGGCACATGAAGCATTGGTGGCACACAGTCAACAGCAGGAACTGCAAGCATCCAACCAGGTCCAAGTCACCACATCTCATCACCAGGTACCCACTAACCGGGTCGAATTTGTCCAACACCATAACATTGATATGGGTCACCATGCTCAACAGCAGCACATAATGCAGCAACAACTGATGGCGGCAACTCGACCAGAACACACCAATCAACAGATCCAACTGACGGTCAGTGAAGATGGCATCGTGACGGTGGTCGAGCCGGGGAGCAGTAAGATGGTCGAGAAGGAGGAACTGCACGAGACTATTAAACTACCCGCAGACCACACGCTTACCGTGCATCAGTTGCAGCAGATTGTTGGACAGCAGGTGCTCGACAGCGTGGTTCGTATCGAGCAAGCGACCGGCGAACCCGCTAACATTCTCGTCACCCACAATCCTGACGGGACCACCTCCATTGAAGCAAGCGCTGGCGATCCGCTTGCTATCGTCAAAGATGAGAAAAGCCAAAAAATAGAGACTGCGCAATTCGCTATACCTGCAGAGATCAAGGAAATGAAGGGAATTGATTTGAAGACTGTAAACGCGATGAACATGGAAGGTGCCGTAGTGAAGATATCAACAGGCGCCCCAGAGCACGATCTGCACGCCATGTATAAAGTTAACGTCGAGGATCTCTCGCAGCTGTTGGCGTACCATGAGGTCTTTGGCAAGATGGGGCCAGACGGACAGCCGCAGGCCAAAGTTGCCGATGTCGAAATAGAGGTGCCGGGTACTAGCTCCGGCATGTCTGAAGCGGAATCATCGCCCGGCCATCACGCCTGCGACATTTGTGGAAAAATATTCCAGTTCCGGTATCAACTTATTGTTCACAGacGTTACCACGGCGAGACCAAACCTTTCACATGCCAAGTTTGCGGCACTTCATTTGCGAATCCCGTAGAACTTTCTCGGCATGGGAAGTGCCATCTTGCCGGTGATCCAGCCGAAAGACACGCTAAGAGAATGGCTCAAGACAAACCCTATGCATGCTCCCTTTGCCATAAAACGTTCTTGCGTAAGGAGCATCTTAACAACCATGTACGCAGTCACACGGGAGAAACACCATACAGATGCGAATTCTGTGCCAAAACGTTCACCCGCAAGGAACACATGGTGAATCACGTGCGGAAACACACGGGTGAAACGCCGCATCGCTGCGATATCTGCAAGAAAAGCTTCACAAGGAAGGAGCATTTCATGAACCATGTCATGTGGCACACAGGTGAAACGCCACACCATTGTACGATTTGCGGGAAGAAGTATACTAGAAAGGAACATTTGACAAACCATATGAGATCGCACACTAACGATACACCGTTCCGATGTGATCTGTGTGGGAAATCCTTCACGAGAAAAGAACATTACTCCAATCACATTCTCTGGCACACTGGCGAAACCCCGCACCGCTGTGATTTCTGCTCTAAAACGTTCACAAGGAAAGAGCATTTACTTAATCATGTGAGACAACATACGGGCGAATCGCCACATCGCTGTAACTTCTGCTCCAAATCATTCACGCGGCGTGAACACTTGGTCAATCATGTTCGACAACATACTGGGGAGACGCCCTTCCAATGTGGATACTGTCCTAAAGCCTTCACTAGGAAAGACCACCTGGGTAAGAAGTTTCATTACATAAACCACGTGAGGCAGCATACCGGCGAGTCCCCTCACAAATGCTCGTTCTGTACAAAGTCGTTCACTCGCAAAGAGCACCTTACAAACCACGTGCGCCAGCACACGGGAGAGTCGCCACATCGCTGCACATTCTGCGCCAAGTCATTCACACGGAAGGAGCATCTTACAAACCACGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGCGCGTTCTCGAGAAAGGAGCATCTGAACAGTCATCTCCGGCAACACACGGGGGTCACGCCGCATTCCTGCTCTTACTGTAACAAGAGCTTCACGAGGAAGGAACATCTCGTCAACCACGTACGGAAACACACCGGCGAAACACCGTTCAAGTGCACGTTCTGTTCGAAGTCGTTCTCTCGCAAGGAACATCTAACCAATCACGTGAATCTGCACACTGGGGAGACGCCGAACAAATGCCCGTTCTGCACTAAAAGCTTCTCTAGAAAGGAACACCTCACCAACCATGTCAGAATACACACTGGTGAATCGCCGCATCGCTGTGAATTCTGCCAGAAGACGTTCACGCGAAAGGAACACCTCACAAATCACATGAAACAACACACCGGCGTCGCAGCTCATACTTGCAAAGTTTGCCAGAAACCATTTACCAGAAAGGAGCACTTACAGACGCACATGAGgtatcacAGTTGTGGCGAGCGTCCTTACAGTTGCGGCGAATGTGGCAAGTCGTTCCCTCTGAAGGGTAACCTCATGTTCCACGAGCGATCCCACAACAAGTCAGGAGCCGGCCCGAGGCCTTTCCGATGCGATATCTGCTCCAAGGACTTTATGTGCAAAGGTCACTTACTTACCCACCGTCGGATTCACACCGAGGCTGGCGAAGAGGCTGTTGCCGAGACACAGACGGAGACTGAAGAGTGTCTGACCGTCACCACCGATTGCACTAATAAATGCATCAAGGTGGAGCTTGATACTGTTGATCGGACAGAGCAAAGAACTTCTGTAGAAAATGGACCAACTGAAAACACTATAGTAGTGCAGCCTGCACTTGATTCTCCAAATCACATTGTGacacaaaatcaaaatactGTTATGCAGATAAGTAGCCAAGTAAGGGTTCCATCTTCGAGTCCAACCGCCGGTGGTGCAGCCGCCACTTTCACCCACGCTGTTAGCACGCAGCACCACGCGGGTACCACTATCTCTCACCATCCGGTCACAGTGAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGSSESQNQRVQSQQQQQVSLPATTAATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHSILNGDPNIILGHHGGQSQVTVSAAQQIPVSQIIATQSGQAHEALVAHSQQQELQASNQVQVTTSHHQVPTNRVEFVQHHNIDMGHHAQQQHIMQQQLMAATRPEHTNQQIQLTVSEDGIVTVVEPGSSKMVEKEELHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDPLAIVKDEKSQKIETAQFAIPAEIKEMKGIDLKTVNAMNMEGAVVKISTGAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVADVEIEVPGTSSGMSEAESSPGHHACDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSLCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHYSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGKKFHYINHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCNKSFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPNKCPFCTKSFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGVAAHTCKVCQKPFTRKEHLQTHMRYHSCGERPYSCGECGKSFPLKGNLMFHERSHNKSGAGPRPFRCDICSKDFMCKGHLLTHRRIHTEAGEEAVAETQTETEECLTVTTDCTNKCIKVELDTVDRTEQRTSVENGPTENTIVVQPALDSPNHIVTQNQNTVMQISSQVRVPSSSPTAGGAAATFTHAVSTQHHAGTTISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00701278;
80% Identity: -