Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007529.1:4272067-4292210[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9e-05 0.0064 17.5 2.2 1 23 396 418 396 418 0.97

2 20 0.00031 0.022 15.8 1.0 1 20 424 443 424 446 0.94

3 20 0.00024 0.017 16.1 5.6 1 23 465 487 465 487 0.98

4 20 0.00011 0.0078 17.2 4.1 1 23 493 515 493 515 0.99

5 20 4.2e-05 0.003 18.5 5.3 1 23 521 543 521 543 0.97

6 20 5.9e-06 0.00042 21.2 8.4 1 23 549 571 549 571 0.97

7 20 9.7e-07 6.9e-05 23.7 2.1 1 23 577 599 577 599 0.98

8 20 0.00011 0.0081 17.1 6.7 1 23 605 627 605 627 0.97

9 20 5e-05 0.0036 18.3 5.4 1 23 633 655 633 655 0.98

10 20 5.5e-07 3.9e-05 24.4 1.9 1 23 661 683 661 683 0.98

11 20 5.6e-05 0.004 18.1 7.9 1 23 689 711 689 711 0.98

12 20 0.00015 0.01 16.8 6.8 1 23 717 739 717 739 0.97

13 20 4.6e-06 0.00033 21.5 5.6 1 23 745 767 745 767 0.98

14 20 2e-05 0.0014 19.6 6.7 1 23 773 795 773 795 0.97

15 20 3.9e-06 0.00028 21.8 5.2 1 23 801 823 801 823 0.98

16 20 2.2e-06 0.00015 22.6 3.6 2 23 830 851 829 851 0.98

17 20 2e-05 0.0014 19.5 8.1 1 23 857 879 857 879 0.97

18 20 3.4e-06 0.00024 21.9 6.5 1 23 885 907 885 907 0.98

19 20 0.0005 0.036 15.1 0.3 1 23 914 936 914 936 0.97

20 20 0.42 30 5.9 5.7 1 23 946 968 946 968 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9e-05	0.0064	17.5	2.2	1	23	396	418	396	418	0.97
2	20	0.00031	0.022	15.8	1.0	1	20	424	443	424	446	0.94
3	20	0.00024	0.017	16.1	5.6	1	23	465	487	465	487	0.98
4	20	0.00011	0.0078	17.2	4.1	1	23	493	515	493	515	0.99
5	20	4.2e-05	0.003	18.5	5.3	1	23	521	543	521	543	0.97
6	20	5.9e-06	0.00042	21.2	8.4	1	23	549	571	549	571	0.97
7	20	9.7e-07	6.9e-05	23.7	2.1	1	23	577	599	577	599	0.98
8	20	0.00011	0.0081	17.1	6.7	1	23	605	627	605	627	0.97
9	20	5e-05	0.0036	18.3	5.4	1	23	633	655	633	655	0.98
10	20	5.5e-07	3.9e-05	24.4	1.9	1	23	661	683	661	683	0.98
11	20	5.6e-05	0.004	18.1	7.9	1	23	689	711	689	711	0.98
12	20	0.00015	0.01	16.8	6.8	1	23	717	739	717	739	0.97
13	20	4.6e-06	0.00033	21.5	5.6	1	23	745	767	745	767	0.98
14	20	2e-05	0.0014	19.6	6.7	1	23	773	795	773	795	0.97
15	20	3.9e-06	0.00028	21.8	5.2	1	23	801	823	801	823	0.98
16	20	2.2e-06	0.00015	22.6	3.6	2	23	830	851	829	851	0.98
17	20	2e-05	0.0014	19.5	8.1	1	23	857	879	857	879	0.97
18	20	3.4e-06	0.00024	21.9	6.5	1	23	885	907	885	907	0.98
19	20	0.0005	0.036	15.1	0.3	1	23	914	936	914	936	0.97
20	20	0.42	30	5.9	5.7	1	23	946	968	946	968	0.98

Sequence Information

Coding Sequence: ATGAATCCCGAGCATCATAATATTAATACGGGCGGGGGCCAACCTCCTGGGAATTCGGAGTCTCAGAATCAAAGAGTACAAGCtcagcagcagcagcagcagcagcaaGTAAGCCTACCTGCCACCACGTCTGCCACCGATTTGCGAGTGAACTCGGCAGCTGTGAACGTTGCTTTGTCCAGCGTTGCAAAGTACTGGGTATTTACGAATTTATTCCCCGGACCTATTCCTCAAGTGTCCGTCTACGGACTTCCAACTGGGACAAGAATTGAGAATGGGAAAGCTGTTCAGGATCTAGGACAAGCTCATGCGAGTATACTAAATGGGGATCCAAACATCATTCTTGGGCATCACGGAGGACAGTCTCAGGTCACAGTATCTGCAGCCCAACAGATACCCCAATCGGTTTCCCAAATCATTGGTACACAGTCTGGGCAGTCACATGAAACGCTGGTGTCACACAGTCAACAGCAAGACATACAGACTTCCAACCAGGTCACCACATCGCACCACCAGGTACCCAATACCCGGGTCGAATTTGTCCAACACCATAACATTGATATGATCCAACTGACAGTGAGTGAAGACGGCATCGTGACGGTAGTGGAGCCAGGCAGCAGTAAAATGGCGGAGAAGGAAGATATGCATGAGACCATCAAGCTACCGGCTGATCATACGCTCACCGTGCATCAGTTGCAGCAGATCGTCGGCCAACAGGTGCTAGATAGCGTGGTTCGCATCGAGCAAGCGACCGGCGAACCCGCTAACATCCTAGTCACCCACAATCCCGACGGCACCACGTCGATCGAGGCCAGCGCTAGCGACCCCCTCGCTATCGTCAAGGATGAGAAGAGCCAAGGGAATTTGAAAAGGGAAATTGAGTCCGCGCAGTTCGCCATACCGTCTGAGATCAAGGAGATGAAGGGAATTGATTTGAAGGCCGTCAATGCCATGAACATGGAAGGTGCCGTAGTGAAGATATCAACAGGCGCACCGGAGCACGACCTCCACGCGATGTACAAAGTGAACGTCGAGGATCTCTCGCAGCTGCTGGCGTACCACGAGGTCTTCGGGAAGATGGGGCCCGACGGTCAGCCTCAGGCTAAAGTTTCTGTTGGTGATATAGAAATCGAAGTGCCCGGAACGAGTTCCGGTATGTCCGAAGCGGAGAACTCGCCCGGACACCATTCCTGTGACATTTGCGGGAAAATATTCCAATTCCGGTATCAGCTTATAGTACACAGACGTTACCACGGCGAGACCAAGCCTTTCACATGCCAAGTTTGCGGCACCTCATTCGCGAATCCCGTAGAACTATCCCGGCACGGGAAGTGCCATTTGGCAGGTGACCCGGCTGAAAGACACGCAAAGAGAATGGCCCAAGACAAACCTTATGCATGCTCCACTTGCCATAAAACATTCTTGCGTAAGGAGCACCTAAACAACCACATACGCAGTCACACAGGAGAAACTCCATACAGATGCGAATTCTGCGCTAAAACTTTCACCCGGAAAGAGCACATGGTGAACCATGTGCGGAAACACACGGGGGAGACGCCGCATCGCTGTGATATATGCAAGAAGAGCTTCACGCGGAAGGAGCATTTTATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCACCATTGTACGATTTGTGGGAAGAAATACACTAGAAAGGAACATTTGACGAATCATATGAGATCGCACACGAACGATACTCCGTACCGCTGTGATCAATGCGGGAAATCCTTCACGAGAAAAGAGCATTACGCCAATCACATTCTGTGGCACACTGGCGAAACCCCTCACCGCTGCGACTTCTGTTCAAAAACCTTCACCCGCAAAGAGCACCTCCTGAACCACGTGCGGCAACACACGGGGGAGTCCCCGCACCGCTGCAACTACTGCGCCAAGTCGTTCACGCGTCGCGAGCATCTGGTTAACCACGTCCGACAACACACCGGGGAGACGCCCTTCCAGTGCGGATACTGTCCTAAAGCATTTACTAGGAAAGACCATTTAGTAAATCACGTTCGACAACACACCGGCGAATCTCCGCACAAATGCTCGTTCTGCACGAAATCATTCACTCGCAAGGAGCACCTAACGAACCACGTGAGACAACATACCGGCGAGTCTCCCCATCGGTGTACCTTCTGCGCTAAGTCTTTCACGAGGAAAGAACATCTTACCAACCACGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGCGCGTTTTCGAGAAAGGAGCATCTGAACTCTCACCTGCGGCAGCACACGGGCGTCACTCCGCATTCCTGCTCTTACTGTAGCAAGACCTTCACGAGGAAGGAGCACCTCGTCAACCACGTACGGAAACACACCGGCGAAACACCGTTCAAGTGCACATTCTGTTCGAAGTCATTTTCGCGCAAGGAGCATCTAACGAATCACATAAATCTGCACACTGGGGAGACGCCGAACAAATGTCCATTCTGCACTAAATCCTTCTCTAGGAAGGAACATCTTACGAACCATGTCAGAATACACACGGGTGAATCGCCGCATCGCTGTGATTTCTGCCAGAAAACATTCACCCGCAAGGAACATTTGACGAACCATATGAAACAGCATACGGGTGGCGCTGCTCACACGTGTAAGGTTTGCCAGAAACCATTCACAAGGAAAGAACACCTACAGACGCATATGAGGTATCACAGTTGTAGCGAACGACCATTCAGTTGCGGAGAATGCGGCAAGTCCTTCCCACTGAAGGGTAATCTCATGTTCCACGAGCGTTCCCACAACAAATCCGGTGGAGCCCCGAGGCCTTTCCGCTGCGATATCTGTTCCAAGGACTTTTTGTGCAAATCTCATCTACTAACTCACCGGCGGGTGCACGAAGACGCCAGTGATGAGACCTCGGCAGACACCCGGACTGAGAATGAGGAGTGCTTGCCCGTCACCGCGGATTGCACCAATAAATGCATCAAGGTGGAGCTTGACACGCCAGAACAAAgAACTTCTGTGGAAAATGGACCAGCTGAATCTATTACAGTGCAACCTTCGCTCGATTCCCCGAATCACATAGTAGTCACCCAAACTCAAAACACTGTGATGCAGATAAGCAGTCAACAGGTGCGAGTGGGGTCATCAAGTCCAAGTGGTGTAACCACAGGCACATTCACCCACACGGTGAGCGCACAGCACCACCCAGGTTCTACGATCGCACATCACCCAGTCACTGTGAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGNSESQNQRVQAQQQQQQQQVSLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAAQQIPQSVSQIIGTQSGQSHETLVSHSQQQDIQTSNQVTTSHHQVPNTRVEFVQHHNIDMIQLTVSEDGIVTVVEPGSSKMAEKEDMHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASASDPLAIVKDEKSQGNLKREIESAQFAIPSEIKEMKGIDLKAVNAMNMEGAVVKISTGAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVSVGDIEIEVPGTSSGMSEAENSPGHHSCDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHIRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPYRCDQCGKSFTRKEHYANHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHINLHTGETPNKCPFCTKSFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGGAAHTCKVCQKPFTRKEHLQTHMRYHSCSERPFSCGECGKSFPLKGNLMFHERSHNKSGGAPRPFRCDICSKDFLCKSHLLTHRRVHEDASDETSADTRTENEECLPVTADCTNKCIKVELDTPEQRTSVENGPAESITVQPSLDSPNHIVVTQTQNTVMQISSQQVRVGSSSPSGVTTGTFTHTVSAQHHPGSTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00701278;
80% Identity: -