Basic Information

Insect: Lampropteryx suffumata
Gene Symbol: -
Assembly: GCA_948098915.1
Location: OX402554.1:6244111-6269942[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 9.5e-05 0.0082 17.4 2.2 1 23 415 437 415 437 0.97

2 20 0.00073 0.063 14.7 0.8 1 20 443 462 443 465 0.93

3 20 0.00082 0.071 14.5 5.6 1 23 484 506 484 506 0.98

4 20 0.00012 0.01 17.2 4.1 1 23 512 534 512 534 0.99

5 20 4.4e-05 0.0038 18.5 5.3 1 23 540 562 540 562 0.97

6 20 1.1e-05 0.00096 20.4 8.3 1 23 568 590 568 590 0.97

7 20 1.2e-06 0.0001 23.4 2.8 1 23 596 618 596 618 0.97

8 20 0.00012 0.01 17.1 6.7 1 23 624 646 624 646 0.97

9 20 2.3e-05 0.002 19.4 6.4 1 23 652 674 652 674 0.98

10 20 5.8e-07 5e-05 24.4 1.9 1 23 680 702 680 702 0.98

11 20 1.1e-05 0.00099 20.3 7.7 1 23 708 730 708 730 0.98

12 20 0.00016 0.013 16.8 6.8 1 23 736 758 736 758 0.97

13 20 4.9e-06 0.00042 21.5 5.6 1 23 764 786 764 786 0.98

14 20 6.5e-06 0.00056 21.1 6.6 1 23 792 814 792 814 0.97

15 20 1.3e-05 0.0011 20.2 5.2 1 23 820 842 820 842 0.98

16 20 2.8e-06 0.00024 22.3 3.8 2 23 849 870 848 870 0.98

17 20 2e-05 0.0017 19.6 8.0 1 23 876 898 876 898 0.97

18 20 3.6e-06 0.00031 21.9 6.5 1 23 904 926 904 926 0.98

19 20 0.0004 0.034 15.5 0.3 1 23 933 955 933 955 0.97

20 20 0.05 4.3 8.9 5.0 1 23 965 987 965 987 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	9.5e-05	0.0082	17.4	2.2	1	23	415	437	415	437	0.97
2	20	0.00073	0.063	14.7	0.8	1	20	443	462	443	465	0.93
3	20	0.00082	0.071	14.5	5.6	1	23	484	506	484	506	0.98
4	20	0.00012	0.01	17.2	4.1	1	23	512	534	512	534	0.99
5	20	4.4e-05	0.0038	18.5	5.3	1	23	540	562	540	562	0.97
6	20	1.1e-05	0.00096	20.4	8.3	1	23	568	590	568	590	0.97
7	20	1.2e-06	0.0001	23.4	2.8	1	23	596	618	596	618	0.97
8	20	0.00012	0.01	17.1	6.7	1	23	624	646	624	646	0.97
9	20	2.3e-05	0.002	19.4	6.4	1	23	652	674	652	674	0.98
10	20	5.8e-07	5e-05	24.4	1.9	1	23	680	702	680	702	0.98
11	20	1.1e-05	0.00099	20.3	7.7	1	23	708	730	708	730	0.98
12	20	0.00016	0.013	16.8	6.8	1	23	736	758	736	758	0.97
13	20	4.9e-06	0.00042	21.5	5.6	1	23	764	786	764	786	0.98
14	20	6.5e-06	0.00056	21.1	6.6	1	23	792	814	792	814	0.97
15	20	1.3e-05	0.0011	20.2	5.2	1	23	820	842	820	842	0.98
16	20	2.8e-06	0.00024	22.3	3.8	2	23	849	870	848	870	0.98
17	20	2e-05	0.0017	19.6	8.0	1	23	876	898	876	898	0.97
18	20	3.6e-06	0.00031	21.9	6.5	1	23	904	926	904	926	0.98
19	20	0.0004	0.034	15.5	0.3	1	23	933	955	933	955	0.97
20	20	0.05	4.3	8.9	5.0	1	23	965	987	965	987	0.98

Sequence Information

Coding Sequence: ATGAATCCTGATCACCACAATATCAATGCTGGTGGCGGTCAGCCTCCTGGGAATTCCGAGTCCCAGAATCAGAGAGTACAGGCCCAACAGCAGCAGCAAGTAAGTCTGCCTGTAACCACGTCTGCTACCGACCTGCGAGTCAATTCAGCAGCTGTGAACGTTGCCTTGTCCAGCGTTGCTAAGTATTGGGTGTTCACGAATTTATTCCCTGGACCGATACCTCAAGTCTCTGTCTATGGGCTACCTACTGGGACCAGAATTGAAAATGGAAAAGCAGTTCAGGATATCGGGCAAGCGCATGCAAGTATTCTAAATGGAGATCCAAACATAATTCTTGGACACCATGGCGGGCAATCCCAGGTTACGGTATCAACTGCCCAACAGATTCCCGTCTCACAGATCATTGCCACACAATCCGGCCAGACACATGAAGCATTGGTGGCACATAGCCAACAGCAGGATCTACAGCAGACATCCAACCAGGTCCAGGTCACCACCTCGCATCACCAGGTACCCAATAACCGGGTCGAATTTGTCCAACACCATAACATAGATATGGGTCACCATGCTCAACAGCAGCACATAATGCAACAACAGCTAATGGCTGCAGCCCGGCCAGAACACTCCAATCAACAGATCCAACTAACGGTCAGTGAAGACGGTATCGTGACTGTCGTGGAGCCCGGCAGCAGTAAAATGGTGGAAAAGGAAGAATTGCATGAGACTATCAAACTACCAGCGGACCACACACTGACTGTACATCAGTTGCAGCAGATTGTTGGACAGCAAGTGCTAGATAGCGTGGTTCGCATCGAGCAAGCGACGGGCGAACCCGCTAACATCCTCGTTACTCACAACCCTGACGGCACCACGTCTATCGAAGCCAGCGCAGGAGACCCGCTGGCAATCGTCAAAGATGAGAAAAACGGAGGGAAAATGGAGACTGCGACGCAGTTTGCTATACCTGCGGAGATCAAAGAGATGAAAGGCATCGATTTGAAGGCCGTAAATGCGATGAACATGGAAGGTGCAGTGGTGAAGATATCAACAGGCACCCCTGATCAAGATCTCCATGCAATGTACAAAGTGAACGTAGAGGATCTGTCGCAGCTACTTGCGTACCACGAAGTGTTCGGCAAGATGGGCGCCGACGGTCAGCCTCAGGCTAAAGTTAGTGATGTAGAAATAGAGGTGCCAGGAACAAGTTCGGGAATGTCTGAAGCAGAATCGTCGCCGGGCCATCACTCTTGCGATATCTGCGGGAAAATATTCCAGTTTCGGTATCAACTTATAGTTCATAGGCGTTACCACGGCGAGTCCAAACCTTTCTCGTGTCAAGTATGTGGCATGTCGTTTCCGAATCCCGTCGAATTATCCCGTCACGGGAAATGCCATCTTGCAAGCGACCCCGCTGAAAGGCACGCTAAGAGGGTAGCTCAAGACAAACCATATGCTTGCTCCACTTGCCATAAAACGTTCTTGCGTAAGGAGCATCTTAACAACCATGTACGCAGCCATACGGGGGAAACTCCTTACAGGTGCGAGTTTTGCGCCAAAACGTTCACCCGTAAGGAACACATGGTGAATCACGTGCGGAAGCATACCGGTGAGACGCCGCACCGGTGTGATATCTGCAAGAAAAGCTTCACGCGCAAAGAGCACTTCATGAACCATGTGATGTGGCACACAGGTGAAACGCCGCACCACTGTACGGTATGTGGAAAGAAGTATACTAGAAAGGAGCATTTGACAAACCATATGAGATCTCACACAAACGATACTCCGTTTAGATGCGATCTATGCGGGAAGTCCTTCACGAGAAAAGAACACTACACCAACCATATTTTGTGGCACACTGGCGAAACACCGCACCGTTGCGATTTCTGCTCCAAAACGTTCACACGCAAAGAGCATTTGCTGAATCACGTCAGGCAGCACACGGGAGAATCGCCTCATCGTTGTAACTACTGCTCCAAGTCGTTCACGCGACGCGAACATCTCGTCAATCACGTTAGACAACATACAGGGGAGACGCCCTTCCAATGCGGATATTGTCCCAAAGCTTTTACAAGGAAAGACCACCTAGTGAATCACGTGCGGCAACACACAGGAGAGTCTCCACACAAGTGCTCGTACTGCACCAAGTCGTTCACTCGCAAGGAACATCTCACGAATCACGTCCGGCAACATACCGGAGAATCACCGCACCGATGCACATTCTGCGCGAAATCCTTCACCAGGAAGGAGCATCTTACCAATCACGTGAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCCCGCGCGTTCTCGAGAAAGGAGCATCTGAACAGCCATCTGCGGCAACACACTGGGGTCACTCCGCACTCCTGCTCATACTGTAACAAGAGCTTTACGAGGAAGGAGCATCTCGTCAATCACGTACGGAAACACACCGGCGAAACACCGTTCAAGTGCACGTTCTGTTCGAAGTCATTCTCTCGCAAGGAGCATCTCACGAATCACGTGAACCTTCACACTGGGGAAACGCCGAACAAATGCCCGTTCTGCACTAAAACCTTCTCTAGAAAGGAACATCTTACCAATCACGTCAGAATACACACGGGCGAATCTCCGCACCGCTGCGAGTTCTGCCAGAAGACGTTCACGCGGAAAGAACATCTCACGAACCATATGAAACAACATACCGGAGACGCGGCCCACACTTGCAAGGTTTGCCAGAAACCATTCACCAGGAAGGAACATCTGCAAACGCACATGAGATATCACAGTTGTGGTGAACGACCATACAGTTGCGGCGAATGCGGCAAGTCGTTCCCACTGAAGGGAAACCTTATGTTCCATGAAAGATCCCACAACAAGTCTGGAGGTGGCCCGAGGCCGTTCCGATGCGATATCTGTTCTAAGGACTTTATGTGCAAAGGGCATTTACTAACTCATCGAAGGATACACACCGACGCGAGTGAGGAAGCCACCGTTGAGGTTAGGACGGAAACTGAAGAGTGTCTTACTGTCACCACTGACTGCACCAACAAATGCATCAAGGTGGAGCTTGAGACGGTCGAAAGGACTGAGCCAAGATCTTCTATTGAAAATGGACCAGCTGAAAACAATGTGGTGGTGCAGCCTGCACTCAGTGATTCTACAAACCACATTGTGACTCAAACTATGCAGATTAGTAGCCAAGTGCGTGTTCCTTCCTCGAGTTCCGATGGCGGCGGTGTGACTACCGGCACTTTCACGCACACTGTGTCCACGCAACACCATACAGGCACTACTATCTCCCACCACCCTGTGACCGTAAACTACTAG
Protein Sequence: MNPDHHNINAGGGQPPGNSESQNQRVQAQQQQQVSLPVTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDIGQAHASILNGDPNIILGHHGGQSQVTVSTAQQIPVSQIIATQSGQTHEALVAHSQQQDLQQTSNQVQVTTSHHQVPNNRVEFVQHHNIDMGHHAQQQHIMQQQLMAAARPEHSNQQIQLTVSEDGIVTVVEPGSSKMVEKEELHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDPLAIVKDEKNGGKMETATQFAIPAEIKEMKGIDLKAVNAMNMEGAVVKISTGTPDQDLHAMYKVNVEDLSQLLAYHEVFGKMGADGQPQAKVSDVEIEVPGTSSGMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFSCQVCGMSFPNPVELSRHGKCHLASDPAERHAKRVAQDKPYACSTCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTVCGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCNKSFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPNKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDAAHTCKVCQKPFTRKEHLQTHMRYHSCGERPYSCGECGKSFPLKGNLMFHERSHNKSGGGPRPFRCDICSKDFMCKGHLLTHRRIHTDASEEATVEVRTETEECLTVTTDCTNKCIKVELETVERTEPRSSIENGPAENNVVVQPALSDSTNHIVTQTMQISSQVRVPSSSSDGGGVTTGTFTHTVSTQHHTGTTISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00701278;
80% Identity: -