Basic Information

Insect: Cosmorhoe ocellata
Gene Symbol: -
Assembly: GCA_963675405.1
Location: OY776254.1:3756933-3770027[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0001 0.0071 17.4 2.2 1 23 414 436 414 436 0.97

2 20 0.00042 0.029 15.5 1.0 1 20 442 461 442 464 0.94

3 20 0.00088 0.061 14.5 5.6 1 23 483 505 483 505 0.98

4 20 0.00012 0.0086 17.2 4.1 1 23 511 533 511 533 0.99

5 20 4.7e-05 0.0033 18.5 5.3 1 23 539 561 539 561 0.97

6 20 1.2e-05 0.00083 20.4 8.3 1 23 567 589 567 589 0.97

7 20 1.3e-06 8.9e-05 23.4 2.8 1 23 595 617 595 617 0.97

8 20 0.00013 0.009 17.1 6.7 1 23 623 645 623 645 0.97

9 20 2.5e-05 0.0017 19.4 6.4 1 23 651 673 651 673 0.98

10 20 6.2e-07 4.3e-05 24.4 1.9 1 23 679 701 679 701 0.98

11 20 6.3e-05 0.0044 18.1 7.9 1 23 707 729 707 729 0.98

12 20 0.00018 0.012 16.7 6.6 1 23 735 757 735 757 0.97

13 20 5.2e-06 0.00036 21.5 5.6 1 23 763 785 763 785 0.98

14 20 6.9e-06 0.00048 21.1 6.6 1 23 791 813 791 813 0.97

15 20 1.4e-05 0.00097 20.2 5.2 1 23 819 841 819 841 0.98

16 20 3e-06 0.00021 22.3 3.8 2 23 848 869 847 869 0.98

17 20 2.1e-05 0.0015 19.6 8.0 1 23 875 897 875 897 0.97

18 20 1.6e-05 0.0011 20.0 6.6 1 23 903 925 903 925 0.98

19 20 0.00043 0.03 15.5 0.3 1 23 932 954 932 954 0.97

20 20 0.054 3.7 8.9 5.0 1 23 964 986 964 986 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0001	0.0071	17.4	2.2	1	23	414	436	414	436	0.97
2	20	0.00042	0.029	15.5	1.0	1	20	442	461	442	464	0.94
3	20	0.00088	0.061	14.5	5.6	1	23	483	505	483	505	0.98
4	20	0.00012	0.0086	17.2	4.1	1	23	511	533	511	533	0.99
5	20	4.7e-05	0.0033	18.5	5.3	1	23	539	561	539	561	0.97
6	20	1.2e-05	0.00083	20.4	8.3	1	23	567	589	567	589	0.97
7	20	1.3e-06	8.9e-05	23.4	2.8	1	23	595	617	595	617	0.97
8	20	0.00013	0.009	17.1	6.7	1	23	623	645	623	645	0.97
9	20	2.5e-05	0.0017	19.4	6.4	1	23	651	673	651	673	0.98
10	20	6.2e-07	4.3e-05	24.4	1.9	1	23	679	701	679	701	0.98
11	20	6.3e-05	0.0044	18.1	7.9	1	23	707	729	707	729	0.98
12	20	0.00018	0.012	16.7	6.6	1	23	735	757	735	757	0.97
13	20	5.2e-06	0.00036	21.5	5.6	1	23	763	785	763	785	0.98
14	20	6.9e-06	0.00048	21.1	6.6	1	23	791	813	791	813	0.97
15	20	1.4e-05	0.00097	20.2	5.2	1	23	819	841	819	841	0.98
16	20	3e-06	0.00021	22.3	3.8	2	23	848	869	847	869	0.98
17	20	2.1e-05	0.0015	19.6	8.0	1	23	875	897	875	897	0.97
18	20	1.6e-05	0.0011	20.0	6.6	1	23	903	925	903	925	0.98
19	20	0.00043	0.03	15.5	0.3	1	23	932	954	932	954	0.97
20	20	0.054	3.7	8.9	5.0	1	23	964	986	964	986	0.98

Sequence Information

Coding Sequence: ATGAATCCGGATCACCACAATATCAATACGGGTGGAGGCCAACCGCCTGGGAGTTCGGAGTCCCAAAACCAGAGAGTGCAGGGTCAACAGCAGCAAGTAAGCCTTCCTGCAACTACTTCTGCTACCGATCTGCGAGTCAATTCAGCTGCTGTGAACGTTGCCTTGTCTAGCGTTGCCAAGTACTGGGTGTTTACGAATTTATTCCCTGGACCGATTCCTCAAGTCTCTGTCTATGGGCTACCCACTGGAACCAGAATTGAGAATGGAAAAGCTGTGCAGGACCTTGGACAAGCACAGACAAGTATTCTGAATGGGGATCCAAACATCATTCTTGGACACCATGGAGGGCAATCTCAGGTCACAGTATCAGCAGCTCAACAGATTCCTGTCTCGCAGATCATTGCCACACAGTCTGGCCAAACACATGaagcgttgGTTGCACACAGTCAACAGCAGGAGCTACAGCAGGCATCCAACCAGGTCCAGGTCACCACATCTCATCACCAGGTACCCAATAACCGGGTCGAATTTGTCCAACACCATAACATTGATATGGGTCACCATGCTCAGCAACAGCACATGATGCAGCAGCAGTTAATGGCGGCAGCGCGGCCTGAACACTCCAATCAACAGATTCAATTGACGGTCAGCGAAGACGGTATCGTGACAGTCGTGGAGCCTGGCAGCAGTAAGATGGTGGAAAAGGAAGAGCTGCATGAGACCATCAAGCTACCAGCAGACCACACGCTGACCGTGCATCAGTTGCAGCAGATTGTTGGCCAGCAAGTGCTAGATAGCGTGGTTCGCATCGAGCAAGCGACGGGCGAACCCGCTAACATTCTCGTTACCCACAATCCGGACGGCACCACGTCCATAGAAGCAAGTGCAGGGGACCCGCTGTCAATCGTCAAAGATGAGAAAAGCACAGGGAAAATGGAGACAGCGCAGTTCGCTATACCTACAGAGATCAAGGAAATGAAAGGCATTGATTTGAAAGCCGTGAATGCGATGAACATGGAGGGTGCAGTGGTAAAAATATCATCCGGCGCTCCAGATCACGATCTTCACGCAATGTACAAAGTAAACGTTGAAGATCTCTCGCACCTGCTAGCGTACCATGAAGTTTTCGGCAAGATGGGTCCTGATGGTCAACCCCAAGCGAAAGTTACTGATGATATAGAAGTAGAGGTGCCACCGACTAGTTCCGGAATGTCCGAAGCGGAGTCGTCGCCCGGTCATCACTCTTGTGATATTTGCGGGAAAATATTCCAGTTCCGGTATCAACTTATTGTTCACagaCGTTACCATGGCGAGTCCAAGCCTTTCACATGCCAAGTATGTGGAACTTCGTTTCCGAATCCCGTCGAACTCTCGCGGCACGGGAAATGCCACCTTGCCGGCGACCCTGCTGAAAGGCACGCCAAGAGAATAGCTCAAGACAAACCATACGCGTGCTCCACTTGCCATAAAACGTTCTTGCGTAAGGAGCATCTTAACAACCATGTGCGCAGTCACACGGGAGAAACTCCATACAGATGCGAGTTCTGTGCTAAAACATTCACTCGTAAGGAGCACATGGTGAATCACGTGCGGAAACACACTGGCGAGACACCGCATCGGTGCGACATTTGCAAGAAAAGCTTCACACGCAAAGAACACTTCATGAATCATGTCATGTGGCATACAGGTGAAACGCCGCACCACTGTACGGTTTGTGGAAAGAAGTATACTAGAAAGGAGCATTTGACAAACCACATGAGATCGCACACGAATGATACTCCGTTTAGATGCGATCTATGCGGGAAGTCCTTCACAAGAAAAGAACACTACACCAACCACATTTTGTGGCACACTGGCGAAACACCGCACCGTTGCGACTTCTGCTCGAAAACTTTCACACGCAAGGAGCATTTACTGAATCACGTCAGACAACACACGGGCGAATCGCCCCATCGCTGCAACTACTGTTCCAAGTCGTTCACGCGGCGCGAACATCTCGTGAACCATGTACGACAACATACAGGAGAAACGCCTTTCCAATGCGGATATTGTCCTAAAGCATTCACAAGGAAAGACCATTTAGTGAATCACGTGCGGCAGCATACAGGTGAATCTCCCCACAAGTGCTCGTTCTGCACCAAGTCGTTCACCCGCAAGGAGCACCTCACGAACCACGTGCGGCAGCACACGGGCGAGTCGCCCCACCGCTGCAGCTTCTGCGCCAAGTCCTTCACCAGGAAGGAGCATCTCACCAACCACGTGAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCCCGCGCGTTCTCGAGAAAGGAGCATCTGAACAGCCATCTGCGGCAACACACGGGGGTCACTCCGCACTCCTGCTCTTACTGTAACAAGAGCTTTACGAGGAAGGAGCACCTCGTCAATCACGTACGGAAACACACCGGCGAAACTCCGTTCAAGTGCACGTTCTGTTCGAAGTCTTTCTCTCGCAAGGAGCACCTCACGAATCACGTGAATCTGCACACTGGGGAAACGCCGAACAAATGCCCGTTCTGCACTAAAACCTTCTCTAGAAAGGAACATCTTACCAATCATGTCAGAATACACACGGGCGAATCGCCACACCGCTGTGAGTTCTGCCAGAAGACGTTTACGCGAAAGGAACATCTCACGAACCATATGAAACAACACACGGGAGACGCAGCTCATACGTGCAAGGTTTGCCAGAAGCCTTTCACGAAGAAGGAACATCTGCAAACGCACATGAGGTATCATAGTTGTGGCGAGCGTCCATACAGTTGCGGAGAATGTGGCAAATCGTTCCCATTGAAGGGCAACCTTATGTTCCATGAGAGATCCCACAACAAGTCTGGAGCGGGCCCGAGGCCGTTCCGATGTGATATTTGTTCAAAGGACTTCATGTGCAAAGGGCATCTACTAACACATCGGCGAATACATGCCGATGCGGGTGAAGGAACTACTGTTGAGGTCCGAACGGAAACTGAAGAGTGTCTGACTGTCACCACTGACTGCACCAACAAATGCATTAAAGTGGAGCTTGAGACAGTGGAACGGGCTGAGCCAAGATCTTCGGTTGAAAATGGACCATCAGAAAACATAGTGGTGCAGCCTACACTCATTGATTCTACAAACCACATTGTGACCCAAACTCAAAACACTGTGATGCAGATAAGCAGCCAAGTGCGTGTACCTTCTTCAAGTCCCAGCAGTGGTGTAGCCACCGGCACTTTTACTCACACGGTGGCAACACAGCACCACGCAGGGACTACCATCTCCCACCACCCTGTGACTGTGAACTACTAG
Protein Sequence: MNPDHHNINTGGGQPPGSSESQNQRVQGQQQQVSLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAQTSILNGDPNIILGHHGGQSQVTVSAAQQIPVSQIIATQSGQTHEALVAHSQQQELQQASNQVQVTTSHHQVPNNRVEFVQHHNIDMGHHAQQQHMMQQQLMAAARPEHSNQQIQLTVSEDGIVTVVEPGSSKMVEKEELHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDPLSIVKDEKSTGKMETAQFAIPTEIKEMKGIDLKAVNAMNMEGAVVKISSGAPDHDLHAMYKVNVEDLSHLLAYHEVFGKMGPDGQPQAKVTDDIEVEVPPTSSGMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGTSFPNPVELSRHGKCHLAGDPAERHAKRIAQDKPYACSTCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTVCGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCNKSFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPNKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDAAHTCKVCQKPFTKKEHLQTHMRYHSCGERPYSCGECGKSFPLKGNLMFHERSHNKSGAGPRPFRCDICSKDFMCKGHLLTHRRIHADAGEGTTVEVRTETEECLTVTTDCTNKCIKVELETVERAEPRSSVENGPSENIVVQPTLIDSTNHIVTQTQNTVMQISSQVRVPSSSPSSGVATGTFTHTVATQHHAGTTISHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704247;
90% Identity: iTF_00701278;
80% Identity: -