Dpau010773.1
Basic Information
- Insect
- Drosophila paucipuncta
- Gene Symbol
- retn
- Assembly
- GCA_035043875.1
- Location
- JAWNMP010000282.1:13749746-13759536[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-26 5.7e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 2 2.5 4.3e+03 -1.9 0.1 21 40 269 293 241 307 0.53
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTGATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCGTTGGCGCTGGTCACACACGCGGCGGCTGCGAACAATCAGCAGGCGCAGGCAGCGgccgcggcagcagcagcacatcgGCGGCTGATGGGCGGACCGGCCTTTGGCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTCATACAGGCcaagaaggagcagcagcagcagcaacagaatgCGCCAGTTCTGGGCGCCACACATccccaccagcagcagcagcagcaacaatcgctGCATcatcaccaacagcaacaacaacaacagcagcagcagcagcagcagcgacagcgctCACAAAGCCCCGAGCTGAGCACGCGTGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCACTTCAGCCGCCGCCGGCGAAACGTGTGGGCAGCGGCCTAATGCCGCCCGGTTTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCCGCCGGTTTTCATCACCAGGCCGCcaacaatcatcatcatcatcatcagcagcagcagcagcagcaacaacagtcgcagcagcaggatGCTGTGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCATAACACCACCGGCAACTCATCGTCGCTGCAAGATGAAAGTGAGCCACAGCAGCTGAATGGACACCAcctgcatcatcatcatcatgatcatAACGATCTGCATCATGATCTGCATCAtgagcatcatcatcatcatcagaaTCATCTGGACAAGTCGGATGACTCGGCCATCGAGAACTCACCCAGCAcatcgacaacgacaacaacaacaacatcatcgtcCACATCCAAATCGCATCGTCACACCTCGCCGGTGTCCACAAAAAAGAAGAGCAGCgtcaactgcaacagcagcagcaacaacagcaacagcaacaacaacaacaagacgcAGTCCTTGTCGTGTCCGAAGGatgcaggcaacaacagcagcagcagcagcagtgccagCGATGCCAAACTGAACCCCCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATGGCGAGCAGCAGTTGATTGTCAATCTCGAACTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCAACCAAgcggcagcagttgcagcagcagccgcagcagccacgccagaggcagcagcaggcgctgAGCGGCAGCAGGCAGAgtcgcctgctgctgctgaggagCCAGCAgtgaggagcagcagcagcagcagcagcactgacGACGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCGGAACGAGGCAATCGATGAGGAATCAacgcaggagcagcaacagcaacaacaacaacagcagcagcagcagcaacaacaactcacaGATGAGCTTGTGAATGGTGCAGGAATTGGGGGTTCATAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQNAPVLGATHPHQQQQQQQSLHHHQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETALQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHHHQQQQQQQQQSQQQDAVSEGEPEDEYGNGEHNTTGNSSSLQDESEPQQLNGHHLHHHHHDHNDLHHDLHHEHHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSSTSKSHRHTSPVSTKKKSSVNCNSSSNNSNSNNNNKTQSLSCPKDAGNNSSSSSSASDAKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAANQAAAVAAAAAAATPEAAAGAERQQAESPAAAEEPAVRSSSSSSSTDDELKHENSQELGRNEAIDEESTQEQQQQQQQQQQQQQQQLTDELVNGAGIGGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00485641; iTF_00606850; iTF_01321698; iTF_01321700; iTF_00556996; iTF_00548585; iTF_00592873; iTF_00527827; iTF_00494890; iTF_00499370; iTF_00497933; iTF_00576846; iTF_00518224; iTF_00501585; iTF_00564433; iTF_00516774; iTF_00542220; iTF_00498651; iTF_00535094; iTF_00500088; iTF_00482012; iTF_00538012; iTF_01320252; iTF_00576126; iTF_01326174;
- 90% Identity
- iTF_00516774;
- 80% Identity
- -