Dtan017478.1
Basic Information
- Insect
- Drosophila tanythrix
- Gene Symbol
- retn
- Assembly
- GCA_035043275.1
- Location
- JAWNNC010000523.1:560798-570612[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.9e-26 6.5e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 3 4.3 9.3e+03 -2.8 1.0 55 76 227 251 216 279 0.57 3 3 2.6 5.8e+03 -2.1 0.5 21 40 271 295 241 309 0.52
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATCCAGGAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCTCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGCCAGATGCCACTGACGACAATTTCGCGACCACCGTTGCCTGGGGGCATGCAACAGATGTCGCCACTGGCGTTGGTCACACATGCCGCGGCTGCGAACAATCAGCAGGCGCAGGCAgcggccgcagcagcagcagcacaccgACGGCTGATGGGCGGGCCCGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTCATACAGGCgaagaaggagcagcagcagcagcaacagattGCGCCAGTTCTGGGCGCCACACATccccaccagcagcagcaacagcagcagcagcaacaatcgctgcatcatcaccaacaacaacaacaacaacaacaacagcagcagcagcgacagcgctCACAAAGTCCCGAGCTGAGCACACGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGATCGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCCCATCAGCCGCCACCGGCGAAACGTGTGGGCAGCGGCCTAATGCCGCCCGGATTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCgctgtggcagcggcagccggTTTTCATCACCAGGCCGCcaacaatcatcatcatcagcagcagcaagagtcgcagcagcaggatGCAGCGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCATGATGACAGTGAGCCACAGCAGCTGAATGGCCACCACctccaccatcaccatcatgACCATCACGATCTGCATCATGATCTTCATCAtgagcatcatcatcatcagaaTCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCAcatcgacaacgacaacaacaacaacatcatccaCATCCAAAGCGCATCGTCACACCTCGCCGGTGTccacaaaaaagaagagcagcggcaactgcaacagcagcagcagcaccaccaacaacaagacGCAGTCCTTGTCGTGTTCGAAGGatgcaggcaacaacagcagcaacgccaacaGTTCCAGCGATGTCAAACTGAATCCCCTTGAGACGCTCAGTCTCCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCTAATGGAGAGCAGCAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCacccaagcagcagcagttgcggCAGCCAAGTCAGAGGCAGGTCAAACTGAACGGGAGCAGGTAGAgacgccagctgctgctgctgaagagCCAGCAgtgaggagcagcagcatcactgAGGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAATTGATGAGGAAACAACgcatgaacaacaacaacaacaacaacagcagcagcagcaacaactcacAGATGACATTGTGAATGGAGCGATTGCTGTTGGGGCGGGAATTGGTGGGATTGGTGTTGGGGGTGCAAGTCTGCTGAAGGATGCTGTGGTCAGTTCGTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPVLGATHPHQQQQQQQQQQSLHHHQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERDRDPTPEPTDLEETAHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQESQQQDAASEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLHHDLHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSTSKAHRHTSPVSTKKKSSGNCNSSSSTTNNKTQSLSCSKDAGNNSSNANSSSDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAATQAAAVAAAKSEAGQTEREQVETPAAAAEEPAVRSSSITEDELKHENSQELGQNEAIDEETTHEQQQQQQQQQQQQLTDDIVNGAIAVGAGIGGIGVGGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00570178;
- 90% Identity
- iTF_00548585; iTF_00592873; iTF_00494890; iTF_00527827; iTF_00482012;
- 80% Identity
- -