Datr007481.1
Basic Information
- Insect
- Drosophila atroscutellata
- Gene Symbol
- retn
- Assembly
- GCA_035041605.1
- Location
- JAWNLA010000095.1:3423154-3432498[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-26 5.5e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 3 4.8 8.2e+03 -2.8 0.7 53 76 225 251 217 267 0.54 3 3 2 3.4e+03 -1.6 0.2 20 43 263 295 243 307 0.54
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATCCAGGAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGatgatttgttttcgtttatGCAAAAGCGAGGCACGCCCATCAACCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTGATAGCTCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGCCAGATGCCACTGACAACAATTTCGCGACCACCGTTGCCTGggggcatgcaacaaatgtcgCCACTGGCGCTGGTCACACATGCCGCGGCTGCGAACAATCAGCAGGCGCAGGCagcggccgcagcagcagcagcacatcgaCGGCTGATGGGCGGGCCCGCTTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAACCGTATGATGGAATATCTGCAGCTCATACAGGCgaagaaggagcagcagcagcagcaacagattgCGCCAATTCTGGGCGCCACACATccccaccagcagcagcaacagcagcagcagcaacaatcgctgcatcatcaccaacaacaacaacaacagcagcagcagcgacagcgctCACAAAGTCCCGAGCTGAGCACACGTGATGCGCTGAGTGCACAGGTGGCGCTGTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGcGAAGCCTTGAACCTTTCCGATTCGCCGCcaactttaaatttgaatcaCATAAAACGGGAAAGGGATCGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCCCATCAGCCGCCACCGGCGAAACGTGTGGGCAGCGGCCTAATGCCGCCCGGATTTCCCGCCAACTTTTACTTGAATCCCCATAATATGGCCGctgtggcggcagcagccggATTTCATCACCAGGCCGCcaacaatcatcatcatcagcagcagcaacagtcgcagcagcaggatGCAGCGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCATGATGACAGTGAGCCACAGCAGCTGAATGGACACCACCtccaccatcaccatcatgACCATCACGATCTGCATCATGATCTTCATCAtgagcatcatcatcatcagaatCATCTGGACAAGTCAGATGACTCGGCCATTGAGAATTCACCCAGCAcatcgacaacgacaacaacaacaacatcatccaCATCCAAAGCGCATCGTCACAGCTCGCCGGTGTccacaaaaaagaagagcagcggcaactgcaacaacagcagcagcaccaccactaACAACAAGACGCAGTCCTTGTCGTGTGCGAAGGatgcaggcaacaacagcagcaacgccaacagTTCCAGCGATGTCAAACTGAATCCCCTCGAGACGCTCAGTCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCTAATGGAGAGCAGGAGTTGATTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCACCCAAGCAAcggcagttgcagcagccaaGTTAGAGGCAGGTCAAACTGAGCGGGAGCAGGCAGAGACGCCAACTGATGCTGAGGAGCCAGCAGTAGGGAACAGCAGCATCACTGAGGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAATTGATGAGGATACAAcgcaggaacaacaacaacaacagcaacaacaactcacagATGACATTGTGAATGGAGCGAGTGCTGTTGGGGCGGGAATTGGAGGGGTTGGCGTTGGGGGTGCAAGTATGCTGAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPILGATHPHQQQQQQQQQQSLHHHQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERDRDPTPEPTDLEETAHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQSQQQDAASEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLHHDLHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSTSKAHRHSSPVSTKKKSSGNCNNSSSTTTNNKTQSLSCAKDAGNNSSNANSSSDVKLNPLETLSLLSGMQFQVARNGTNANGEQELIVNLELNGIKYSGVLVAATQATAVAAAKLEAGQTEREQAETPTDAEEPAVGNSSITEDELKHENSQELGQNEAIDEDTTQEQQQQQQQQLTDDIVNGASAVGAGIGGVGVGGASMLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00570178;
- 90% Identity
- iTF_00606850;
- 80% Identity
- -