Dhet000605.1
Basic Information
- Insect
- Drosophila heteroneura
- Gene Symbol
- retn
- Assembly
- GCA_035042245.1
- Location
- JAWNLO010000055.1:996098-1006263[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-26 5.6e-23 81.0 0.0 2 89 20 105 19 105 0.96 2 2 2.1 3.5e+03 -1.7 0.1 20 41 265 293 241 307 0.53
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTACGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAACCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCGCTGACAACAATTTCGCGACCACCGTTGCCTGGCGGCATGCAACAGATGTCGCCACTGGCGCTGGTCACACACGCGGCGGCTGCAAACAATCAGCAGGCACAGGCAgcggccgcagcagcagcagcacatcgACGGCTGATGGGCGGACCGGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTTATACAGGCcaagaaggagcagcagcagcagcaacagaatgCACCAATTCTGGGCGCCACACATccccaccagcagcagcagcagcagcagcaacagtcgctgcatcatcaccaacaacaacaacaacaacagcagcagcagcgacagcgctCACAAAGCCCCGAGCTGAGCACACGTGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAACCAACGGATCTGGAGGAAACGGCACttcagccgccgccgccgaaaCGTGTGGGCAGCGGCCTAATGCCGCCCGGTTTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCCGCCGGTTTTCATCACCAGGCCGCcaacaatcatcatcatcatcagcagcaacagcagcagcagcaacagtcgcagcagcaggatGGAGCGTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCATAACACCACCGGCAACTCATCGTCGCTGCAAGATGACAGTGAGCCACAGCAGCTGAATGGACACCACCtccaccatcatcatcatgatcataACGATCTGCACCATGATCTGCATCAtgagcatcatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCAcatcgacaacgacaacaacaacaacttcatcGTCCACATCCAAATCGCATCGTCACAGCTCGCCGGTGTccacaaaaaagaagagcagcgtcaactgcaacagcaacagcagcagcaacaacaacaacaacaacaataacaataacaagacgCAGTCCTTGTCGTGTGCGAAGGatgcaggcaacaacagcagcagcagtgccagcGATGCCAAACTGAATCCCCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATggcgagcagcagctgattgTCAATCTCGAACTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAACCacccaagcagcagcagcagccaagccAGAGGCAGGACAAGCTGAGCGGGAGCAGGCAGAGacgccaactgctgctgctgctgctgctgccgaggAGCCAGCAgtgaggagcagcagcagcagcagcactgacGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAACTGATGAGGAAACAacgcaggaacaacaacaacaacaacaacaacagcaacagcagcagcagcaacaacaactcacagATGAGATTGTGAATGGTGCAGGAATTGGGGGGGTTGGTGTTGGGGTCAGCGGTGCAGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQNAPILGATHPHQQQQQQQQQSLHHHQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETALQPPPPKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHHQQQQQQQQQSQQQDGASEGEPEDEYGNGEHNTTGNSSSLQDDSEPQQLNGHHLHHHHHDHNDLHHDLHHEHHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSSTSKSHRHSSPVSTKKKSSVNCNSNSSSNNNNNNNNNNKTQSLSCAKDAGNNSSSSASDAKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVATTQAAAAAKPEAGQAEREQAETPTAAAAAAAEEPAVRSSSSSSTDDELKHENSQELGQNEATDEETTQEQQQQQQQQQQQQQQQQLTDEIVNGAGIGGVGVGVSGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00570178;
- 90% Identity
- iTF_00516774;
- 80% Identity
- -