Dmac009431.1
Basic Information
- Insect
- Drosophila maculinotata
- Gene Symbol
- retn
- Assembly
- GCA_035045305.1
- Location
- JAWNPD010000387.1:18388378-18397640[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-26 5.9e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 2 2.6 4.9e+03 -1.9 0.2 21 40 264 288 234 302 0.55
Sequence Information
- Coding Sequence
- ATGCTCATCTCTGAGGATCAAATACAGGAGCTCTACGAAATCAATGACGATCCCAAGCGAAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCTATCAATCGCCTGCCCATTATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTAATAGCGCGTGGCGGCCTTGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACACCAGCCGAACTGCAGGCGGCCATTGATGGCAATCGTCGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCCATGCACAATCAGATGCCACTGACGACCATTTCGCGTCCCCAGTTGCCTGGTGGCATGCAACAGATGTCGCCACTGGCGCTGGTCACACACGCGGCGGCAGCAAACAATCAgcaggcggcggcagcggcagcagcagcgcaccGGCGTCTGATGGGCGGTCCGGCATTTGCCCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAGTACTTTCAGCTCATACAGGCCAAGAAGGAGCAGCAGAGTGTGCCAGTTCTAGGCGCCACACAtccccaccagcagcagcagcagcagcaacaatcgctgcaccatcagcaacaacaacaacagcagcagcaacaacaacagcagcagcgacagcgttCACAAAGTCCCGAGCTTAGTACGCGAGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCTGCGCACACCTCACCACAGCAACGCGAAGCCCTGAACCTCTCCGACTCGCCGCcaactttgaatttgaatCACATAAAACGCGAGCGGGAACGAGATCCAACGCCGGAGCCGGCGGATCATGAGGATAATGCGCCGCATCAGCCGCCTCCGGCAAAGCGTGTGGGCAGCGGTTTAATGCCCGGTTTTCCCGCAAACTTCTACTTGAATCCACACAATATGGCCgcggtggcagctgctgccgggTTTCATCATCAGGCGGCCaacaatcatcatcatcagcaacagcagcagcagcaacaacaagatgcAGCGTCGGATGGCGAGCCAGAGGATGAGTACGGCAATGGAGAGCACAACATTACCGGGAATTCATCGTCGTTGCAGGACGACAGTGAGCCACAGCAGCTAAATGGacaccatcaccatcatcatcatcatgatcatgatcatgatcatcatcatcacagTCATCATCAGAATCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAgcacatcgacaacaacaacaacaacggcatcCCAAAGACACAGCTCACCGGTGTCCACAAAAAAGAAGAGTaacgtcaacagcagcagcaacaagacgCAGTCCTGCAGCCCAAAGGATGCgcagcacaacagcaacaacagcaacaacaacaacagcagcagcagcagtagtgaTGTCAAGCTGAATCCTCTCGAGACTCTGAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCAATGCAAATGGCGAACAGCAGTTGATTGTCAATCTCGAGCTGAATGGCATCAAGTACTCCGGAGTGCTGGTGGCAGGCAATGCAACTAGAACACCAGCCCAACCTAACGAGGATATAGAGGAGGAGAcagcgcctgctgctgctgctgcttgtgctcCTGAGGTGCAGACAGCAAGGAGCAGCGAGGACATCAGCAATGCACTCAAGCATGAAAACAGCCAGGAACTCGGCCAGAACGAGTCAATTGACGAGGAAAcaacgcagcaacaacaacagcagcagcagcagcacacagaTGACATTGTGAATGGAGTTGGTGTAGGGATTGGGATTGGTGTGGGGGTTGGGATTGGTGTTGGGGGTGTGAATCTGCTTAAAGATGCTGTGGTCAGTTCGTAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTTISRPQLPGGMQQMSPLALVTHAAAANNQQAAAAAAAAHRRLMGGPAFAQMPNLVTQEIENRMMEYFQLIQAKKEQQSVPVLGATHPHQQQQQQQQSLHHQQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADHEDNAPHQPPPAKRVGSGLMPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQQQQQDAASDGEPEDEYGNGEHNITGNSSSLQDDSEPQQLNGHHHHHHHHDHDHDHHHHSHHQNHLDKSDDSAIENSPSTSTTTTTTASQRHSSPVSTKKKSNVNSSSNKTQSCSPKDAQHNSNNSNNNNSSSSSSDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAGNATRTPAQPNEDIEEETAPAAAAACAPEVQTARSSEDISNALKHENSQELGQNESIDEETTQQQQQQQQQHTDDIVNGVGVGIGIGVGVGIGVGGVNLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00570178;
- 90% Identity
- -
- 80% Identity
- -