Ddiv003913.1
Basic Information
- Insect
- Drosophila dives
- Gene Symbol
- retn
- Assembly
- GCA_035042365.1
- Location
- JAWNLJ010000171.1:2339233-2349665[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-26 5.9e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 2 4.2 6.6e+03 -2.5 1.0 20 39 276 300 243 315 0.52
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTACGAAATCAATGATGATCCCAAGCGAAAGGAGTTTCTCGATGATTTGTTTTCCTTTATGCAAAAGCGAGGCACGCCCATCAACCGTTTGCCCATTATGGCCAAATCGGTGCTGGATCTATATGAGTTATATAATTTGGTAATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACAAGTGCCGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTATCCCTACGAGTGCGAGAAGAAGAATCTCAGCACTCCCGCCGAACTCCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGTCAGATGCCACTGACAACAATTTCGCGACCACCGTTACCTggtggcatgcaacaaatgtcGCCGCTGGCGCTGGTCACACACGCCGCCGCGGCGAACAATCAGCAGGCGCAAGCAgcggccgcagcagcagcagcacatcgACGGCTGATGGGCGCACCGGGCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGCTTATACAGGCcaagaaggagcagcagcagcaacaacagattGCGCCAGTTCTGGGCGCTACACATccacaccaacagcagcaacagcagcagcagcaacaatcgctGCATcatcaccaacaacagcagcaacagcaacaacaacagcagcagcaacagcagcagcagcagcgacagcgctCACAAAGTCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTTTCCGATTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCGACGCCAGAGCCAACGGATCTGGAGGAAACGGCACATCAGCCGCCGCCAGCGAAACGTGTGGGCAGCGGCCTAATGCCGCCCGGTTTTCCCGCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCAGCTGGTTTTCATCACCAAGCCGCCaacaatcatcatcatcagcagcagcagcaacagtcgcagcagcaggacGCCACGTCCGAGGGTGAACCAGAGGATGAGTATGGGAATGGGGAGCACAATACCACCGGCAACTCATCGTCGCTGCACGATGACAGTGAGCCACAGCAGTTGAATGGACACCAtctacatcatcatcatcatgaccATCACGATCTACTTCACGACCATCATCAtgagcatcatcatcatcatcagaaTCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCCAGCACAtcgacaacaaccacaacaacatcatcatcatccataTCCAAAGCGCATCGCCACAGCTCGCCAGTGTCCACAAAAAAGAagggcagcaacaacaacagcagcagcctcaacaacaacaacaacaacaaaacgcagTCCTTGTTGTGCACGAAGGATGCAGGCAATGACAGCAACAGTGCCAGCGATGTCAAGCTGAATCCTCTCGAGACGCTCAGCCTGCTCTCGGGCATGCAGTTTCAAGTGGCACGCAACGGCACCAATGCAAATGGCGAACAGCAGCTGATTGTCAATCTCGAGCTAAATGGGATTAAGTACTCGGGTGTGCTGGTGGCAGCCatccaagcagcagcagcagcagcggcagttacaggagcagcagcagcagtcaagcCAGAGGCGGGAGAAGCTGAGCGGGAGCAGGCAGCGacgccaactgctgctgttgctgctgctcctgctgagGAGCCAGCAGTGAGACGCAGCAGCCTCGCCGAGGATGAGAACAGCCAGAAACTTGGCCAGAACGAGGCAATTGATGAGGAAACAATGCAggaacatcaacagcagcaactcacAGATGACATTGTGAATGGAGCAAGTGTTGGCATTGGAGgagttggtgttggtgttggagTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGAPGFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPVLGATHPHQQQQQQQQQQSLHHHQQQQQQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETAHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQQSQQQDATSEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLLHDHHHEHHHHHQNHLDKSDDSAIENSPSTSTTTTTTSSSSISKAHRHSSPVSTKKKGSNNNSSSLNNNNNNKTQSLLCTKDAGNDSNSASDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLIVNLELNGIKYSGVLVAAIQAAAAAAAVTGAAAAVKPEAGEAEREQAATPTAAVAAAPAEEPAVRRSSLAEDENSQKLGQNEAIDEETMQEHQQQQLTDDIVNGASVGIGGVGVGVGVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00570178;
- 90% Identity
- iTF_00535094;
- 80% Identity
- -