Dmim002854.1
Basic Information
- Insect
- Drosophila mimica
- Gene Symbol
- retn
- Assembly
- GCA_037043585.1
- Location
- JBAMBE010000361.1:8347723-8357208[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.6e-26 5.7e-23 81.1 0.0 2 89 20 105 19 105 0.96 2 3 5.3 8.3e+03 -2.8 0.7 53 76 224 250 216 265 0.53 3 3 2.4 3.8e+03 -1.7 0.3 20 41 262 292 240 305 0.53
Sequence Information
- Coding Sequence
- ATGCTCATCTCGGAGGATCAAATACAGGAGCTCTACGAAATCAATGATGATCCCAAGCGGAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGAGAGgCACGCCCATCAACCGACTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCGCGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCGGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCCTACGAGTGCGAGAAGAAGAACCTCAGCACTCCCGCCGAACTGCAGGCGGCCATCGATGGCAATCGTCGCGAAGGACGCCGCTCCAGCTACGGCCAATACGAGGCCATGCACAGTCAGATGCCACTGaCAACAATTTCGCGACCACCCTTGCCTGGTGGCATGCAACAGATGTCGCCACTGGCGTTGGTCACACATGCGGCTGCCAACAATCAACAGGCACAGGCAgcggccgcagcagcagcagctcatcgaCGGCTGATGGGCGGACCGGCCTTTGGTCAGATGCCGAATCTGGTGACGCAGGAGATTGAGAATCGGATGATGGAATATCTGCAGCTGATACAGGCGAAgaaggaacagcaacagcagcaacagattgCGCCAGTTCTGGGCGCCACACAtccccaccagcagcagcaacagcagcagcagcaacaatcgctgcatcatcaccaacaacaacaacaacagcagcagcagcgacagcgctCACAAAGTCCCGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTTTGGCATATGTACCACAATAGCAGTCCAACCGGTTCGGCGCACACCTCACCACAGCAACGcGAAGCTTTGAACCTTTCCGACTCGCCGCCAACTTTGAATTTGAATCACATAAAACGGGAAAGGGAACGCGATCCAACGCCAGAACCAACGGATTTGGAGGAAACGGAACatcagccgccgccgccgaaACGTGTAGGCAGCGGCCTAATGCCACCCGGTTTTCCACCCAACTTTTACTTGAATCCCCACAATATGGCCGCTGTGGCAGCCGCAGCCGGCTTTCATCATCAGGCCGCcaacaatcatcatcatcagcagcagcagcagcagcattcgcAGCAGCAGGATGCAGGTTCTGAGGGTGAACCAGAGGATGAGTATGGCAATGGGGAGCACAACACCACCGGCAACTCATCGTCGCTGCATGATGACAGTGAGCCGCAGCAGCTGAATGGACACCACCtccaccatcatcatcatgaccATCACGATCTGCATCATGATCTTCATCAtgaacatcatcatcatcagaatCATCTGGACAAGTCGGATGACTCGGCCATTGAGAACTCACCGAGCAcatcgacaacgacaacaacaacaacatcatccaCATCCAAAGCGCATCGTCACAGCTCGCCGGTGTCCACAAAAAAGAAGGgcagcggcaactgcaacagcggcagcatcacaaacaacaacaagacgcAGTCCTTGTCGAGTGCGAAGGatgcaggcaacaacagcagcagtgccaGCGATGTCAAACTGAATCCTCTCGAGACGCTCAGCCTCCTCTCGGGCATGCAGTTTCAAGTGGCACGTAACGGTACCAATGCAAATGGCGAACAGCAGTTGGTTGTCAATCTCGAGCTAAATGGCATTAAGTACTCGGGTGTGCTGGTGGCAGCCacccaagcagcagcagctgttggagcaacagcagcaccagcagccaAGTCAGAGGCAGGACAAACTGAGCGGGAGCAGGCAGAGACGCCAGACGCCGCCGCTGCTGAGGAGCCAGCAGTGAGGAACAGCAGCATCACTGAGGATGAGCTCAAGCATGAAAACAGCCAGGAACTTGGCCAGAACGAGGCAATTGATGAGGAATCAACgcaggaacaacagcaacagcaacatcaactcaCAGATGACATTGTGAATGGAGCAAGTGTTGTTGGTGCAGGAATTGGAGGGGTTGGTGTTGGGGTCGGTGGTGCAGTGGGTGCGGTGGGTGCAAGTCTGCTTAAGGATGCTGTGGTCAGTTCATAG
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPLTTISRPPLPGGMQQMSPLALVTHAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQQQQQIAPVLGATHPHQQQQQQQQQQSLHHHQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDLEETEHQPPPPKRVGSGLMPPGFPPNFYLNPHNMAAVAAAAGFHHQAANNHHHQQQQQQHSQQQDAGSEGEPEDEYGNGEHNTTGNSSSLHDDSEPQQLNGHHLHHHHHDHHDLHHDLHHEHHHHQNHLDKSDDSAIENSPSTSTTTTTTTSSTSKAHRHSSPVSTKKKGSGNCNSGSITNNNKTQSLSSAKDAGNNSSSASDVKLNPLETLSLLSGMQFQVARNGTNANGEQQLVVNLELNGIKYSGVLVAATQAAAAVGATAAPAAKSEAGQTEREQAETPDAAAAEEPAVRNSSITEDELKHENSQELGQNEAIDEESTQEQQQQQHQLTDDIVNGASVVGAGIGGVGVGVGGAVGAVGASLLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00570178;
- 90% Identity
- iTF_00606850;
- 80% Identity
- -