Dgau014187.1
Basic Information
- Insect
- Drosophila gaucha
- Gene Symbol
- -
- Assembly
- GCA_035045545.1
- Location
- JAWNOY010000375.1:742917-752321[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.9e-09 1e-05 25.2 0.0 16 40 632 658 628 661 0.84 2 4 6.6e-14 1.2e-10 41.1 0.1 2 39 673 710 672 713 0.94 3 4 1.5e-17 2.7e-14 52.7 0.0 1 45 727 772 727 772 0.98 4 4 1.6e-19 2.8e-16 59.1 0.0 1 43 779 822 779 823 0.97
Sequence Information
- Coding Sequence
- ATGACCACAAAATCCAGCagtagcggcagcggcagcagcagcctccaTGTCAACCCGCAACCCTTTCCCAAGCAATCATGCATCCTTTACATGCCCCACACCCGCTCCTTGCCCCCATCTACATGCCACAGCGCACTGCCTTGCCCCGTAGGTCTGTTGCGCACCGCGgaacaattgaaaatcaaaggTCTCTGCGAGCCGGCCGAGAATGCGGATGATTTAAATGACGCTGCATCGGCGATAATAACCGTATCGGAGAATATACAGCAGGCGGTCGTTGGCAATATTGTGAATGCGAGCTTAGTGTCCGGCGCTCCCTCGCCCACActcgagcagcagcatcatcagcagcagcagcagcagcagcaacagcaacagcagcagcagcagcagcaacaggagcatcaacagcagcaattggTGAATAGTGCGTTGCTGGCACAGCATTCGCTTGCAACAAGCGGTGGCATACAGTTGGCGGCAGGGCAACAGCTGCTGAGCAATACAGgcggcagcagtagcagcagcagcagcttgcagcagttgcaacagcagcagcagcagcaacagcaacaacagttgcagccaACGCCGCGTAAATCGCGACTGCGTAAACGCTCCAAATCGCCAGATTTGCAACTGCAAACACAAacgcaacatcatcatcagcagcagcagcagcaacagcaacagcagcaacaacagcaacatcatcatcatccacAAACGATACTCATCCAGGGACAGAATCAGACATCGATCGTGAGTCTGCAGCAGACGGCCGACGGCAATTATATACCAGTTGCAACAACTGGCGGCGACGACTCCGATAGCGATAATAAGCCGCAAAAGATCTGCAAGACAGAACAGTCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAatccCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATATCGCACCATCATGCCACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAGGTAATCGAGGCCAAGCATCTGGCCCATGTACaggcgcagcaacagcagcagcagcagcagcaacaacaacagcagcagcagcagcagcagcaacaacaacagcaacagcagcaacatgcagcacatcatcatcagcatttgCACGCTCAGCAATTGTTGGCGCagagtcagcagcagcaacagcaacagcagcagcaacagcagcaacatcaacagcagcaacagcagcagcaggcggcggTGCATGCAGCACAGCATGCAGCGCACGCCACGCATGCGGATATTGGTGGCGCCACTGTCATGGAGATTGATCCTAGCCAGATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCTCCGGGCATATGGacATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGCcggtggtgttggtggtggtggtggtggtggcggcattggtggtggtggtgttaaTGCTGGCGAGAAAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCAACGACCTTATGGCAGCGTGCTCATCGCTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCATGGAACGAGGACGCCCTACAGAATGCCTTGGAGGCATTGCGCTCGGGTCAAATATCGGCAAATAAAGCATCCAAAGCTTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGCATTCGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCTGTACAGAAAGCGAGTGCCGAATTCGGTATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCAATGAACGAGGCATTGAACTCGGTGCGCGTCGGTCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTACGGACGCTTCAAGCGTGGCAAATACGACGTGGTGGCCAATACAAGTGGCATCTCCCTTAACAACACGTCCGGCAATACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCatatgttgcagcaacagttcCCGTACAGTCCGTCGCCGCATCCGCAGACGCCGCAGCATCATGGAACGCCGCAGCACCATAGTACGCCGTTGCATCATAGTGCGGGGCATCACAGTTCGCAGCAGGGACCGCCGACGCCGCAGGGCATGCAGCAGCATGTGGTGCACATGCAACAGCAGTCGCCACATCAGtcgcatcatcagcagcagcatatgCAACAGGACGTCGTCACATCAAGCAGCCAGGTGGTGcacagccaacagcagcagcagcagcagcagcaacagcagcagcagcagcagttgcagcagatCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MTTKSSSSGSGSSSLHVNPQPFPKQSCILYMPHTRSLPPSTCHSALPCPVGLLRTAEQLKIKGLCEPAENADDLNDAASAIITVSENIQQAVVGNIVNASLVSGAPSPTLEQQHHQQQQQQQQQQQQQQQQQQEHQQQQLVNSALLAQHSLATSGGIQLAAGQQLLSNTGGSSSSSSSLQQLQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLQTQTQHHHQQQQQQQQQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVATTGGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQHAAHHHQHLHAQQLLAQSQQQQQQQQQQQQQHQQQQQQQQAAVHAAQHAAHATHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGIGGGGVNAGEKDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPQTPQHHGTPQHHSTPLHHSAGHHSSQQGPPTPQGMQQHVVHMQQQSPHQSHHQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00500226; iTF_00554466; iTF_00554305; iTF_00498788; iTF_00532292; iTF_00572516; iTF_00509735; iTF_00502441; iTF_00546569; iTF_00568170; iTF_00479563; iTF_00479402; iTF_00599500; iTF_00516175; iTF_00551503; iTF_00559409; iTF_00573236; iTF_00472983; iTF_01549495; iTF_00511193; iTF_00543662; iTF_00535229; iTF_00544410; iTF_00545156; iTF_00493564; iTF_00616988; iTF_00616822; iTF_00476542; iTF_00519838; iTF_00520004; iTF_00540287; iTF_00552223;
- 90% Identity
- iTF_00479563;
- 80% Identity
- -